RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 LRP10Q7Z4F1 713 aa17.68■□□□□ 0.42
CHRNB4-204ENST00000559849 DBF4Q9UBU7 674 aaPredicted RBP17.68■□□□□ 0.42
CHRNB4-204ENST00000559849 TGFB2P61812 414 aa17.68■□□□□ 0.42
CHRNB4-204ENST00000559849 PROSER3Q2NL68 480 aa17.68■□□□□ 0.42
CHRNB4-204ENST00000559849 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
CHRNB4-204ENST00000559849 BCORQ6W2J9 1755 aa17.68■□□□□ 0.42
CHRNB4-204ENST00000559849 MAP3K15Q6ZN16 1313 aa17.67■□□□□ 0.42
CHRNB4-204ENST00000559849 ANXA1P04083 346 aa17.67■□□□□ 0.42
CHRNB4-204ENST00000559849 CHPF2Q9P2E5 772 aa17.67■□□□□ 0.42
CHRNB4-204ENST00000559849 HLFQ16534 295 aa17.67■□□□□ 0.42
CHRNB4-204ENST00000559849 KIF13BQ9NQT8 1826 aa17.66■□□□□ 0.42
CHRNB4-204ENST00000559849 C10orf71Q711Q0 1435 aa17.66■□□□□ 0.42
CHRNB4-204ENST00000559849 COPS6Q7L5N1 327 aa17.66■□□□□ 0.42
CHRNB4-204ENST00000559849 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
CHRNB4-204ENST00000559849 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
CHRNB4-204ENST00000559849 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
CHRNB4-204ENST00000559849 GOLGA2Q08379 1002 aa17.65■□□□□ 0.42
CHRNB4-204ENST00000559849 TSPYL6Q8N831 410 aa17.65■□□□□ 0.42
CHRNB4-204ENST00000559849 MYH16Q9H6N6 1097 aa17.65■□□□□ 0.42
CHRNB4-204ENST00000559849 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
CHRNB4-204ENST00000559849 FANCIQ9NVI1 1328 aa17.65■□□□□ 0.42
CHRNB4-204ENST00000559849 CCDC30Q5VVM6 783 aa17.65■□□□□ 0.42
CHRNB4-204ENST00000559849 ZBTB3Q9H5J0 574 aa17.65■□□□□ 0.42
CHRNB4-204ENST00000559849 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHRNB4-204ENST00000559849 NUP98P52948 1817 aa17.64■□□□□ 0.41
CHRNB4-204ENST00000559849 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
CHRNB4-204ENST00000559849 TWISTNBQ3B726 338 aaPredicted RBP17.64■□□□□ 0.41
CHRNB4-204ENST00000559849 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
CHRNB4-204ENST00000559849 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
CHRNB4-204ENST00000559849 NRXN2Q9P2S2 1712 aa17.64■□□□□ 0.41
CHRNB4-204ENST00000559849 GPR162Q16538 588 aa17.63■□□□□ 0.41
CHRNB4-204ENST00000559849 GIGYF2Q6Y7W6 1299 aaKnown RBP17.63■□□□□ 0.41
CHRNB4-204ENST00000559849 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
CHRNB4-204ENST00000559849 NPHP1O15259 732 aa17.62■□□□□ 0.41
CHRNB4-204ENST00000559849 PRR5LQ6MZQ0 368 aa17.62■□□□□ 0.41
CHRNB4-204ENST00000559849 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
CHRNB4-204ENST00000559849 NBPF5PQ86XG9 351 aaPredicted RBP17.62■□□□□ 0.41
CHRNB4-204ENST00000559849 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
CHRNB4-204ENST00000559849 CNBD1Q8NA66 436 aa17.61■□□□□ 0.41
CHRNB4-204ENST00000559849 PXDNLA1KZ92 1463 aa17.61■□□□□ 0.41
CHRNB4-204ENST00000559849 DPEP1P16444 411 aa17.6■□□□□ 0.41
CHRNB4-204ENST00000559849 ANKRD13DQ6ZTN6 518 aa17.6■□□□□ 0.41
CHRNB4-204ENST00000559849 N4BP2Q86UW6 1770 aaPredicted RBP17.6■□□□□ 0.41
CHRNB4-204ENST00000559849 ATP10DQ9P241 1426 aa17.6■□□□□ 0.41
CHRNB4-204ENST00000559849 BRIP1Q9BX63 1249 aa17.6■□□□□ 0.41
CHRNB4-204ENST00000559849 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
CHRNB4-204ENST00000559849 E9PSI1 815 aa17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 ST5P78524 1137 aa17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 HSP90AB3PQ58FF7 597 aa17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 ZNF34Q8IZ26 560 aa17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 PLBD2Q8NHP8 589 aa17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 GRIN3BO60391 1043 aa17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 VAMP4O75379 141 aa17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 KCNA3P22001 575 aa17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 PDE6BP35913 854 aa17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 PHAXQ9H814 394 aaKnown RBP17.59■□□□□ 0.41
CHRNB4-204ENST00000559849 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.4
CHRNB4-204ENST00000559849 GPTP24298 496 aa17.58■□□□□ 0.4
CHRNB4-204ENST00000559849 NYXQ9GZU5 481 aa17.58■□□□□ 0.4
CHRNB4-204ENST00000559849 PIM2Q9P1W9 311 aa17.58■□□□□ 0.4
CHRNB4-204ENST00000559849 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
CHRNB4-204ENST00000559849 FAM177BA6PVY3 158 aa17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 YBX3P16989 372 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 GTF2E1P29083 439 aaPredicted RBP17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 PARP10Q53GL7 1025 aa17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 CCDC24Q8N4L8 307 aa17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 H0YIN7 160 aa17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 CHRNA5P30532 468 aa17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 TCIRG1Q13488 830 aa17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 WWC3Q9ULE0 1092 aa17.57■□□□□ 0.4
CHRNB4-204ENST00000559849 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
CHRNB4-204ENST00000559849 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
CHRNB4-204ENST00000559849 CACNA1FO60840 1977 aa17.56■□□□□ 0.4
CHRNB4-204ENST00000559849 UBN2Q6ZU65 1347 aa17.56■□□□□ 0.4
CHRNB4-204ENST00000559849 SUSD4Q5VX71 490 aa17.56■□□□□ 0.4
CHRNB4-204ENST00000559849 TCERG1O14776 1098 aaKnown RBP17.55■□□□□ 0.4
CHRNB4-204ENST00000559849 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
CHRNB4-204ENST00000559849 RIC3Q7Z5B4 369 aa17.55■□□□□ 0.4
CHRNB4-204ENST00000559849 C2CD5Q86YS7 1000 aa17.55■□□□□ 0.4
CHRNB4-204ENST00000559849 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
CHRNB4-204ENST00000559849 BRCA1P38398 1863 aaKnown RBP17.54■□□□□ 0.4
CHRNB4-204ENST00000559849 ANKRD31Q8N7Z5 1873 aa17.54■□□□□ 0.4
CHRNB4-204ENST00000559849 IBTKQ9P2D0 1353 aaPredicted RBP17.54■□□□□ 0.4
CHRNB4-204ENST00000559849 DALRD3Q5D0E6 543 aaKnown RBP17.54■□□□□ 0.4
CHRNB4-204ENST00000559849 CDCA7LQ96GN5 454 aa17.54■□□□□ 0.4
CHRNB4-204ENST00000559849 ANKRD36CQ5JPF3 1778 aa17.53■□□□□ 0.4
CHRNB4-204ENST00000559849 NLRP10Q86W26 655 aa17.52■□□□□ 0.4
CHRNB4-204ENST00000559849 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
CHRNB4-204ENST00000559849 UTP14AQ9BVJ6 771 aaKnown RBP17.52■□□□□ 0.4
CHRNB4-204ENST00000559849 NTSR2O95665 410 aa17.52■□□□□ 0.39
CHRNB4-204ENST00000559849 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.39
CHRNB4-204ENST00000559849 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
CHRNB4-204ENST00000559849 KLRG2A4D1S0 409 aaPredicted RBP17.51■□□□□ 0.39
CHRNB4-204ENST00000559849 SRGNP10124 158 aa17.51■□□□□ 0.39
CHRNB4-204ENST00000559849 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHRNB4-204ENST00000559849 TRIM28Q13263 835 aaKnown RBP17.51■□□□□ 0.39
CHRNB4-204ENST00000559849 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
CHRNB4-204ENST00000559849 KSR2Q6VAB6 950 aa17.51■□□□□ 0.39
CHRNB4-204ENST00000559849 TTLL6Q8N841 843 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms