RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ZNF784Q8NCA9 323 aaPredicted RBP14.34□□□□□ -0.11
SPG11-216ENST00000559347 BCS1LQ9Y276 419 aa14.34□□□□□ -0.11
SPG11-216ENST00000559347 TIAM2Q8IVF5 1701 aa14.34□□□□□ -0.11
SPG11-216ENST00000559347 ERBB4Q15303 1308 aa14.34□□□□□ -0.11
SPG11-216ENST00000559347 CHL1O00533 1208 aa14.33□□□□□ -0.12
SPG11-216ENST00000559347 APAF1O14727 1248 aa14.33□□□□□ -0.12
SPG11-216ENST00000559347 CHRNA5P30532 468 aa14.33□□□□□ -0.12
SPG11-216ENST00000559347 PRR5LQ6MZQ0 368 aa14.33□□□□□ -0.12
SPG11-216ENST00000559347 CLEC4GQ6UXB4 293 aa14.33□□□□□ -0.12
SPG11-216ENST00000559347 ZNF652Q9Y2D9 606 aa14.33□□□□□ -0.12
SPG11-216ENST00000559347 ATP10DQ9P241 1426 aa14.32□□□□□ -0.12
SPG11-216ENST00000559347 FER1L6Q2WGJ9 1857 aa14.32□□□□□ -0.12
SPG11-216ENST00000559347 CCDC88AQ3V6T2 1871 aa14.32□□□□□ -0.12
SPG11-216ENST00000559347 PIM2Q9P1W9 311 aa14.32□□□□□ -0.12
SPG11-216ENST00000559347 MYL6BP14649 208 aa14.31□□□□□ -0.12
SPG11-216ENST00000559347 CNBD1Q8NA66 436 aa14.31□□□□□ -0.12
SPG11-216ENST00000559347 SETDB2Q96T68 719 aa14.31□□□□□ -0.12
SPG11-216ENST00000559347 MRS2Q9HD23 443 aa14.31□□□□□ -0.12
SPG11-216ENST00000559347 LAMB2P55268 1798 aa14.3□□□□□ -0.12
SPG11-216ENST00000559347 SLX4Q8IY92 1834 aa14.3□□□□□ -0.12
SPG11-216ENST00000559347 HLFQ16534 295 aa14.3□□□□□ -0.12
SPG11-216ENST00000559347 KRT24Q2M2I5 525 aa14.3□□□□□ -0.12
SPG11-216ENST00000559347 LRP10Q7Z4F1 713 aa14.3□□□□□ -0.12
SPG11-216ENST00000559347 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
SPG11-216ENST00000559347 LAS1LQ9Y4W2 734 aaKnown RBP14.3□□□□□ -0.12
SPG11-216ENST00000559347 MAP3K15Q6ZN16 1313 aa14.3□□□□□ -0.12
SPG11-216ENST00000559347 PDIA6Q15084 440 aa14.29□□□□□ -0.12
SPG11-216ENST00000559347 DALRD3Q5D0E6 543 aaKnown RBP14.29□□□□□ -0.12
SPG11-216ENST00000559347 KIF6Q6ZMV9 814 aa14.29□□□□□ -0.12
SPG11-216ENST00000559347 TTLL7Q6ZT98 887 aa14.29□□□□□ -0.12
SPG11-216ENST00000559347 NGEFQ8N5V2 710 aa14.29□□□□□ -0.12
SPG11-216ENST00000559347 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
SPG11-216ENST00000559347 ERVV-1B6SEH8 477 aa14.28□□□□□ -0.12
SPG11-216ENST00000559347 ZNF853P0CG23 659 aa14.28□□□□□ -0.12
SPG11-216ENST00000559347 EIF2S2P20042 333 aaKnown RBP14.28□□□□□ -0.12
SPG11-216ENST00000559347 ST5P78524 1137 aa14.28□□□□□ -0.12
SPG11-216ENST00000559347 PROSER3Q2NL68 480 aa14.28□□□□□ -0.12
SPG11-216ENST00000559347 RIC1Q4ADV7 1423 aa14.28□□□□□ -0.12
SPG11-216ENST00000559347 C2CD5Q86YS7 1000 aa14.28□□□□□ -0.12
SPG11-216ENST00000559347 CCDC24Q8N4L8 307 aa14.28□□□□□ -0.12
SPG11-216ENST00000559347 BRIP1Q9BX63 1249 aa14.28□□□□□ -0.12
SPG11-216ENST00000559347 MBIPQ9NS73 344 aa14.28□□□□□ -0.12
SPG11-216ENST00000559347 IBTKQ9P2D0 1353 aaPredicted RBP14.28□□□□□ -0.12
SPG11-216ENST00000559347 NIP7Q9Y221 180 aaKnown RBP eCLIP14.28□□□□□ -0.12
SPG11-216ENST00000559347 ANXA1P04083 346 aa14.27□□□□□ -0.13
SPG11-216ENST00000559347 HOXB7P09629 217 aa14.27□□□□□ -0.13
SPG11-216ENST00000559347 PDE6BP35913 854 aa14.27□□□□□ -0.13
SPG11-216ENST00000559347 CALD1Q05682 793 aaKnown RBP14.27□□□□□ -0.13
SPG11-216ENST00000559347 NBPF5PQ86XG9 351 aaPredicted RBP14.27□□□□□ -0.13
SPG11-216ENST00000559347 ZBTB3Q9H5J0 574 aa14.27□□□□□ -0.13
SPG11-216ENST00000559347 IFT57Q9NWB7 429 aa14.27□□□□□ -0.13
SPG11-216ENST00000559347 ABCC12Q96J65 1359 aa14.26□□□□□ -0.13
SPG11-216ENST00000559347 UBN2Q6ZU65 1347 aa14.26□□□□□ -0.13
SPG11-216ENST00000559347 H0YIN7 160 aa14.26□□□□□ -0.13
SPG11-216ENST00000559347 NPHP1O15259 732 aa14.26□□□□□ -0.13
SPG11-216ENST00000559347 GNAI1P63096 354 aa14.26□□□□□ -0.13
SPG11-216ENST00000559347 NECTIN2Q92692 538 aa14.26□□□□□ -0.13
SPG11-216ENST00000559347 PDZRN3Q9UPQ7 1066 aa14.26□□□□□ -0.13
SPG11-216ENST00000559347 DDX60Q8IY21 1712 aaKnown RBP14.26□□□□□ -0.13
SPG11-216ENST00000559347 HDGFL1Q5TGJ6 251 aa14.25□□□□□ -0.13
SPG11-216ENST00000559347 GIGYF2Q6Y7W6 1299 aaKnown RBP14.25□□□□□ -0.13
SPG11-216ENST00000559347 ARHGAP27Q6ZUM4 889 aa14.25□□□□□ -0.13
SPG11-216ENST00000559347 CCDC27Q2M243 656 aa14.24□□□□□ -0.13
SPG11-216ENST00000559347 TTLL6Q8N841 843 aa14.24□□□□□ -0.13
SPG11-216ENST00000559347 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
SPG11-216ENST00000559347 CHPF2Q9P2E5 772 aa14.24□□□□□ -0.13
SPG11-216ENST00000559347 SENP3-EIF4A1A0A087X0R7 540 aa14.23□□□□□ -0.13
SPG11-216ENST00000559347 FAM177BA6PVY3 158 aa14.23□□□□□ -0.13
SPG11-216ENST00000559347 DUSP27Q5VZP5 1158 aa14.23□□□□□ -0.13
SPG11-216ENST00000559347 TPTE2Q6XPS3 522 aa14.23□□□□□ -0.13
SPG11-216ENST00000559347 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
SPG11-216ENST00000559347 CACNA1FO60840 1977 aa14.22□□□□□ -0.13
SPG11-216ENST00000559347 KLRG2A4D1S0 409 aaPredicted RBP14.22□□□□□ -0.13
SPG11-216ENST00000559347 SRGNP10124 158 aa14.22□□□□□ -0.13
SPG11-216ENST00000559347 GPTP24298 496 aa14.22□□□□□ -0.13
SPG11-216ENST00000559347 RASSF7Q02833 373 aa14.22□□□□□ -0.13
SPG11-216ENST00000559347 WWC1Q8IX03 1113 aa14.22□□□□□ -0.13
SPG11-216ENST00000559347 XAGE3Q8WTP9 111 aa14.22□□□□□ -0.13
SPG11-216ENST00000559347 ZNF622Q969S3 477 aaKnown RBP eCLIP14.22□□□□□ -0.13
SPG11-216ENST00000559347 NYXQ9GZU5 481 aa14.22□□□□□ -0.13
SPG11-216ENST00000559347 NTSR2O95665 410 aa14.21□□□□□ -0.13
SPG11-216ENST00000559347 STYK1Q6J9G0 422 aa14.21□□□□□ -0.13
SPG11-216ENST00000559347 COPS6Q7L5N1 327 aa14.21□□□□□ -0.13
SPG11-216ENST00000559347 DBF4Q9UBU7 674 aaPredicted RBP14.21□□□□□ -0.13
SPG11-216ENST00000559347 AIMP1Q12904 312 aaKnown RBP14.2□□□□□ -0.14
SPG11-216ENST00000559347 PRPF40BQ6NWY9 871 aaKnown RBP14.2□□□□□ -0.14
SPG11-216ENST00000559347 NUTM1Q86Y26 1132 aa14.2□□□□□ -0.14
SPG11-216ENST00000559347 MASTLQ96GX5 879 aa14.2□□□□□ -0.14
SPG11-216ENST00000559347 IL16Q14005 1332 aa14.19□□□□□ -0.14
SPG11-216ENST00000559347 NFKBIEO00221 500 aa14.19□□□□□ -0.14
SPG11-216ENST00000559347 NPR1P16066 1061 aa14.19□□□□□ -0.14
SPG11-216ENST00000559347 CRY2Q49AN0 593 aa14.19□□□□□ -0.14
SPG11-216ENST00000559347 ERFEQ4G0M1 354 aa14.19□□□□□ -0.14
SPG11-216ENST00000559347 PARP10Q53GL7 1025 aa14.19□□□□□ -0.14
SPG11-216ENST00000559347 SUSD4Q5VX71 490 aa14.19□□□□□ -0.14
SPG11-216ENST00000559347 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
SPG11-216ENST00000559347 TSR2Q969E8 191 aaKnown RBP14.19□□□□□ -0.14
SPG11-216ENST00000559347 CNKSR1Q969H4 720 aa14.19□□□□□ -0.14
SPG11-216ENST00000559347 GPBP1L1Q9HC44 474 aaPredicted RBP14.19□□□□□ -0.14
SPG11-216ENST00000559347 LRRC37AA6NMS7 1700 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms