RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 NBPF1Q3BBV0 1214 aa18.41■□□□□ 0.54
CASC4-208ENST00000559151 PRICKLE2Q7Z3G6 844 aa18.41■□□□□ 0.54
CASC4-208ENST00000559151 CITED4Q96RK1 184 aa18.41■□□□□ 0.54
CASC4-208ENST00000559151 KIAA1522Q9P206 1035 aaPredicted RBP18.41■□□□□ 0.54
CASC4-208ENST00000559151 FAM187AA6NFU0 413 aa18.4■□□□□ 0.54
CASC4-208ENST00000559151 ZNF326Q5BKZ1 582 aaKnown RBP18.4■□□□□ 0.54
CASC4-208ENST00000559151 POLIQ9UNA4 740 aa18.4■□□□□ 0.54
CASC4-208ENST00000559151 BCS1LQ9Y276 419 aa18.4■□□□□ 0.54
CASC4-208ENST00000559151 P4HBP07237 508 aaKnown RBP18.39■□□□□ 0.53
CASC4-208ENST00000559151 COL19A1Q14993 1142 aa18.39■□□□□ 0.53
CASC4-208ENST00000559151 KLRG1Q96E93 195 aa18.39■□□□□ 0.53
CASC4-208ENST00000559151 ZDHHC3Q9NYG2 299 aa18.39■□□□□ 0.53
CASC4-208ENST00000559151 TREHO43280 583 aa18.38■□□□□ 0.53
CASC4-208ENST00000559151 DNM1Q05193 864 aaKnown RBP18.38■□□□□ 0.53
CASC4-208ENST00000559151 EAPPQ56P03 285 aaPredicted RBP18.38■□□□□ 0.53
CASC4-208ENST00000559151 NBPF10Q6P3W6 841 aaKnown RBP18.38■□□□□ 0.53
CASC4-208ENST00000559151 TREML1Q86YW5 311 aa18.38■□□□□ 0.53
CASC4-208ENST00000559151 C7orf43Q8WVR3 580 aa18.38■□□□□ 0.53
CASC4-208ENST00000559151 EDEM1Q92611 657 aa18.38■□□□□ 0.53
CASC4-208ENST00000559151 FAM129BQ96TA1 746 aa18.38■□□□□ 0.53
CASC4-208ENST00000559151 IGHA2P01877 340 aa18.36■□□□□ 0.53
CASC4-208ENST00000559151 LYSMD3Q7Z3D4 306 aa18.36■□□□□ 0.53
CASC4-208ENST00000559151 GPR182O15218 404 aa18.35■□□□□ 0.53
CASC4-208ENST00000559151 BMP1P13497 986 aa18.35■□□□□ 0.53
CASC4-208ENST00000559151 MZF1P28698 734 aaPredicted RBP18.35■□□□□ 0.53
CASC4-208ENST00000559151 DMRTB1Q96MA1 342 aa18.35■□□□□ 0.53
CASC4-208ENST00000559151 PDGFAP04085 211 aa18.34■□□□□ 0.53
CASC4-208ENST00000559151 TATP17735 454 aaPredicted RBP18.34■□□□□ 0.53
CASC4-208ENST00000559151 FMR1Q06787 632 aaKnown RBP eCLIP18.34■□□□□ 0.53
CASC4-208ENST00000559151 AVPP01185 164 aa18.33■□□□□ 0.52
CASC4-208ENST00000559151 RHOQP17081 205 aa18.33■□□□□ 0.52
CASC4-208ENST00000559151 DSC3Q14574 896 aa18.33■□□□□ 0.52
CASC4-208ENST00000559151 GJD3Q8N144 294 aa18.33■□□□□ 0.52
CASC4-208ENST00000559151 ATP4AP20648 1035 aa18.32■□□□□ 0.52
CASC4-208ENST00000559151 PDE3BQ13370 1112 aa18.32■□□□□ 0.52
CASC4-208ENST00000559151 ZNF280CQ8ND82 737 aa18.32■□□□□ 0.52
CASC4-208ENST00000559151 GPR152Q8TDT2 470 aa18.32■□□□□ 0.52
CASC4-208ENST00000559151 HSH2DQ96JZ2 352 aa18.32■□□□□ 0.52
CASC4-208ENST00000559151 SUSD3Q96L08 255 aa18.32■□□□□ 0.52
CASC4-208ENST00000559151 TTLL8A6PVC2 850 aa18.31■□□□□ 0.52
CASC4-208ENST00000559151 TGFBR3LH3BV60 316 aa18.3■□□□□ 0.52
CASC4-208ENST00000559151 RGS20O76081 388 aa18.3■□□□□ 0.52
CASC4-208ENST00000559151 MICAL2O94851 1124 aa18.3■□□□□ 0.52
CASC4-208ENST00000559151 PLCB3Q01970 1234 aa18.3■□□□□ 0.52
CASC4-208ENST00000559151 EHHADHQ08426 723 aa18.3■□□□□ 0.52
CASC4-208ENST00000559151 SCARF1Q14162 830 aa18.3■□□□□ 0.52
CASC4-208ENST00000559151 HIF1AQ16665 826 aa18.3■□□□□ 0.52
CASC4-208ENST00000559151 BICDL1Q6ZP65 573 aa18.3■□□□□ 0.52
CASC4-208ENST00000559151 FIGNL2A6NMB9 653 aa18.29■□□□□ 0.52
CASC4-208ENST00000559151 TRIM46Q7Z4K8 759 aa18.29■□□□□ 0.52
CASC4-208ENST00000559151 MAPK8P45983 427 aa18.28■□□□□ 0.52
CASC4-208ENST00000559151 WDR44Q5JSH3 913 aa18.28■□□□□ 0.52
CASC4-208ENST00000559151 NUDT16Q96DE0 195 aaKnown RBP18.28■□□□□ 0.52
CASC4-208ENST00000559151 TIMMDC1Q9NPL8 285 aa18.28■□□□□ 0.52
CASC4-208ENST00000559151 GPC6Q9Y625 555 aaPredicted RBP18.28■□□□□ 0.52
CASC4-208ENST00000559151 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
CASC4-208ENST00000559151 USP5P45974 858 aa18.27■□□□□ 0.52
CASC4-208ENST00000559151 NIF3L1Q9GZT8 377 aa18.27■□□□□ 0.52
CASC4-208ENST00000559151 ALKBH8Q96BT7 664 aaKnown RBP18.26■□□□□ 0.51
CASC4-208ENST00000559151 DMGDHQ9UI17 866 aaKnown RBP18.26■□□□□ 0.51
CASC4-208ENST00000559151 MSX1P28360 303 aa18.25■□□□□ 0.51
CASC4-208ENST00000559151 ZIC5Q96T25 663 aa18.25■□□□□ 0.51
CASC4-208ENST00000559151 A0A1B0GTH6 734 aa18.24■□□□□ 0.51
CASC4-208ENST00000559151 IER5Q5VY09 327 aa18.24■□□□□ 0.51
CASC4-208ENST00000559151 OPLAHO14841 1288 aa18.23■□□□□ 0.51
CASC4-208ENST00000559151 IDH3AP50213 366 aa18.23■□□□□ 0.51
CASC4-208ENST00000559151 ARSJQ5FYB0 599 aaPredicted RBP18.23■□□□□ 0.51
CASC4-208ENST00000559151 PCSK2P16519 638 aa18.22■□□□□ 0.51
CASC4-208ENST00000559151 ZFP42Q96MM3 310 aa18.22■□□□□ 0.51
CASC4-208ENST00000559151 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
CASC4-208ENST00000559151 FAM13BQ9NYF5 915 aa18.22■□□□□ 0.51
CASC4-208ENST00000559151 A6NHS1 94 aa18.21■□□□□ 0.51
CASC4-208ENST00000559151 LDHBP07195 334 aaKnown RBP18.21■□□□□ 0.51
CASC4-208ENST00000559151 SMCPP49901 116 aaPredicted RBP18.21■□□□□ 0.51
CASC4-208ENST00000559151 CTC1Q2NKJ3 1217 aa18.21■□□□□ 0.51
CASC4-208ENST00000559151 C8orf34Q49A92 452 aa18.21■□□□□ 0.51
CASC4-208ENST00000559151 LRRC69Q6ZNQ3 347 aa18.21■□□□□ 0.51
CASC4-208ENST00000559151 ANKIB1Q9P2G1 1089 aa18.21■□□□□ 0.51
CASC4-208ENST00000559151 PKDCCQ504Y2 493 aa18.2■□□□□ 0.5
CASC4-208ENST00000559151 NEUROD4Q9HD90 331 aa18.2■□□□□ 0.5
CASC4-208ENST00000559151 IGSF5Q9NSI5 407 aa18.2■□□□□ 0.5
CASC4-208ENST00000559151 USP20Q9Y2K6 914 aa18.2■□□□□ 0.5
CASC4-208ENST00000559151 PIK3R5Q8WYR1 880 aa18.19■□□□□ 0.5
CASC4-208ENST00000559151 SETDB2Q96T68 719 aa18.19■□□□□ 0.5
CASC4-208ENST00000559151 WWC3Q9ULE0 1092 aa18.19■□□□□ 0.5
CASC4-208ENST00000559151 DGAT1O75907 488 aa18.18■□□□□ 0.5
CASC4-208ENST00000559151 BTLAQ7Z6A9 289 aa18.18■□□□□ 0.5
CASC4-208ENST00000559151 GPAMQ9HCL2 828 aa18.18■□□□□ 0.5
CASC4-208ENST00000559151 DNMT3LQ9UJW3 386 aa18.18■□□□□ 0.5
CASC4-208ENST00000559151 A0A1W2PNR3 127 aa18.17■□□□□ 0.5
CASC4-208ENST00000559151 VAMP1P23763 118 aa18.17■□□□□ 0.5
CASC4-208ENST00000559151 ARSDP51689 593 aa18.17■□□□□ 0.5
CASC4-208ENST00000559151 AXIN1O15169 862 aa18.16■□□□□ 0.5
CASC4-208ENST00000559151 INPP5BP32019 993 aa18.16■□□□□ 0.5
CASC4-208ENST00000559151 PNMA6FA0A0J9YX94 578 aa18.15■□□□□ 0.5
CASC4-208ENST00000559151 PRPF40AO75400 957 aaKnown RBP18.15■□□□□ 0.5
CASC4-208ENST00000559151 ENOX2Q16206 610 aaKnown RBP18.15■□□□□ 0.5
CASC4-208ENST00000559151 TTC16Q8NEE8 873 aa18.15■□□□□ 0.5
CASC4-208ENST00000559151 RUBCNLQ9H714 662 aa18.15■□□□□ 0.5
CASC4-208ENST00000559151 RNF19AQ9NV58 838 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms