RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 CNBD1Q8NA66 436 aa22.39■■□□□ 1.17
LRRC28-210ENST00000558879 RUNDC1Q96C34 613 aa22.39■■□□□ 1.17
LRRC28-210ENST00000558879 BRIP1Q9BX63 1249 aa22.39■■□□□ 1.17
LRRC28-210ENST00000558879 PDZRN3Q9UPQ7 1066 aa22.39■■□□□ 1.17
LRRC28-210ENST00000558879 ERBB4Q15303 1308 aa22.38■■□□□ 1.17
LRRC28-210ENST00000558879 TSPYL4Q9UJ04 414 aa22.38■■□□□ 1.17
LRRC28-210ENST00000558879 LAMB2P55268 1798 aa22.38■■□□□ 1.17
LRRC28-210ENST00000558879 H0YIN7 160 aa22.37■■□□□ 1.17
LRRC28-210ENST00000558879 PDE6BP35913 854 aa22.37■■□□□ 1.17
LRRC28-210ENST00000558879 TTLL6Q8N841 843 aa22.37■■□□□ 1.17
LRRC28-210ENST00000558879 ADAMTS8Q9UP79 889 aa22.37■■□□□ 1.17
LRRC28-210ENST00000558879 RRP7AQ9Y3A4 280 aaKnown RBP22.37■■□□□ 1.17
LRRC28-210ENST00000558879 TRIM35Q9UPQ4 493 aa22.36■■□□□ 1.17
LRRC28-210ENST00000558879 CCDC24Q8N4L8 307 aa22.35■■□□□ 1.17
LRRC28-210ENST00000558879 ZNF526Q8TF50 670 aaPredicted RBP22.35■■□□□ 1.17
LRRC28-210ENST00000558879 ST5P78524 1137 aa22.34■■□□□ 1.17
LRRC28-210ENST00000558879 HLFQ16534 295 aa22.34■■□□□ 1.17
LRRC28-210ENST00000558879 C9orf131Q5VYM1 1079 aa22.34■■□□□ 1.17
LRRC28-210ENST00000558879 LRP10Q7Z4F1 713 aa22.34■■□□□ 1.17
LRRC28-210ENST00000558879 MAP3K15Q6ZN16 1313 aa22.33■■□□□ 1.17
LRRC28-210ENST00000558879 ERVV-1B6SEH8 477 aa22.33■■□□□ 1.17
LRRC28-210ENST00000558879 NIP7Q9Y221 180 aaKnown RBP eCLIP22.33■■□□□ 1.17
LRRC28-210ENST00000558879 IBTKQ9P2D0 1353 aaPredicted RBP22.33■■□□□ 1.17
LRRC28-210ENST00000558879 RIC1Q4ADV7 1423 aa22.32■■□□□ 1.16
LRRC28-210ENST00000558879 KIF3CO14782 793 aa22.32■■□□□ 1.16
LRRC28-210ENST00000558879 RASSF7Q02833 373 aa22.32■■□□□ 1.16
LRRC28-210ENST00000558879 NBPF5PQ86XG9 351 aaPredicted RBP22.32■■□□□ 1.16
LRRC28-210ENST00000558879 CHL1O00533 1208 aa22.31■■□□□ 1.16
LRRC28-210ENST00000558879 SRGNP10124 158 aa22.31■■□□□ 1.16
LRRC28-210ENST00000558879 NEUROD2Q15784 382 aa22.31■■□□□ 1.16
LRRC28-210ENST00000558879 TTLL7Q6ZT98 887 aa22.31■■□□□ 1.16
LRRC28-210ENST00000558879 RNF181Q9P0P0 153 aa22.31■■□□□ 1.16
LRRC28-210ENST00000558879 NFKBIEO00221 500 aa22.3■■□□□ 1.16
LRRC28-210ENST00000558879 MYL6BP14649 208 aa22.3■■□□□ 1.16
LRRC28-210ENST00000558879 PRELPP51888 382 aa22.3■■□□□ 1.16
LRRC28-210ENST00000558879 PDIA6Q15084 440 aa22.3■■□□□ 1.16
LRRC28-210ENST00000558879 STYK1Q6J9G0 422 aa22.3■■□□□ 1.16
LRRC28-210ENST00000558879 ZC3H4Q9UPT8 1303 aaKnown RBP22.3■■□□□ 1.16
LRRC28-210ENST00000558879 ABCC12Q96J65 1359 aa22.29■■□□□ 1.16
LRRC28-210ENST00000558879 KLRG2A4D1S0 409 aaPredicted RBP22.29■■□□□ 1.16
LRRC28-210ENST00000558879 NPHP1O15259 732 aa22.29■■□□□ 1.16
LRRC28-210ENST00000558879 KIF6Q6ZMV9 814 aa22.29■■□□□ 1.16
LRRC28-210ENST00000558879 ZNF622Q969S3 477 aaKnown RBP eCLIP22.29■■□□□ 1.16
LRRC28-210ENST00000558879 WDR90Q96KV7 1748 aa22.28■■□□□ 1.16
LRRC28-210ENST00000558879 NGEFQ8N5V2 710 aa22.28■■□□□ 1.16
LRRC28-210ENST00000558879 UBN2Q6ZU65 1347 aa22.28■■□□□ 1.16
LRRC28-210ENST00000558879 TPTE2Q6XPS3 522 aa22.27■■□□□ 1.16
LRRC28-210ENST00000558879 DDX60Q8IY21 1712 aaKnown RBP22.27■■□□□ 1.16
LRRC28-210ENST00000558879 CNKSR1Q969H4 720 aa22.27■■□□□ 1.16
LRRC28-210ENST00000558879 MASTLQ96GX5 879 aa22.27■■□□□ 1.16
LRRC28-210ENST00000558879 LTBP3Q9NS15 1303 aa22.27■■□□□ 1.16
LRRC28-210ENST00000558879 SENP3-EIF4A1A0A087X0R7 540 aa22.26■■□□□ 1.15
LRRC28-210ENST00000558879 LMNB1P20700 586 aa22.26■■□□□ 1.15
LRRC28-210ENST00000558879 GIGYF2Q6Y7W6 1299 aaKnown RBP22.26■■□□□ 1.15
LRRC28-210ENST00000558879 ZBTB3Q9H5J0 574 aa22.26■■□□□ 1.15
LRRC28-210ENST00000558879 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
LRRC28-210ENST00000558879 PROSER3Q2NL68 480 aa22.25■■□□□ 1.15
LRRC28-210ENST00000558879 PRPF40BQ6NWY9 871 aaKnown RBP22.25■■□□□ 1.15
LRRC28-210ENST00000558879 SNED1Q8TER0 1413 aa22.24■■□□□ 1.15
LRRC28-210ENST00000558879 C21orf2O43822 256 aa22.24■■□□□ 1.15
LRRC28-210ENST00000558879 EIF2S2P20042 333 aaKnown RBP22.24■■□□□ 1.15
LRRC28-210ENST00000558879 CFAP44Q96MT7 982 aa22.24■■□□□ 1.15
LRRC28-210ENST00000558879 NYXQ9GZU5 481 aa22.24■■□□□ 1.15
LRRC28-210ENST00000558879 NMRK2Q9NPI5 230 aa22.24■■□□□ 1.15
LRRC28-210ENST00000558879 HOXB7P09629 217 aa22.23■■□□□ 1.15
LRRC28-210ENST00000558879 NPR1P16066 1061 aa22.23■■□□□ 1.15
LRRC28-210ENST00000558879 ZNF34Q8IZ26 560 aa22.23■■□□□ 1.15
LRRC28-210ENST00000558879 FAM177BA6PVY3 158 aa22.22■■□□□ 1.15
LRRC28-210ENST00000558879 APAF1O14727 1248 aa22.22■■□□□ 1.15
LRRC28-210ENST00000558879 ANXA1P04083 346 aa22.22■■□□□ 1.15
LRRC28-210ENST00000558879 ZNF853P0CG23 659 aa22.22■■□□□ 1.15
LRRC28-210ENST00000558879 CRY2Q49AN0 593 aa22.22■■□□□ 1.15
LRRC28-210ENST00000558879 CCDC184Q52MB2 194 aa22.22■■□□□ 1.15
LRRC28-210ENST00000558879 ZNF316A6NFI3 1004 aaPredicted RBP22.21■■□□□ 1.15
LRRC28-210ENST00000558879 NTSR2O95665 410 aa22.21■■□□□ 1.15
LRRC28-210ENST00000558879 C7orf43Q8WVR3 580 aa22.21■■□□□ 1.15
LRRC28-210ENST00000558879 DDX21Q9NR30 783 aaKnown RBP eCLIP22.21■■□□□ 1.15
LRRC28-210ENST00000558879 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
LRRC28-210ENST00000558879 TAF1P21675 1872 aa22.21■■□□□ 1.15
LRRC28-210ENST00000558879 CACNA1FO60840 1977 aa22.21■■□□□ 1.15
LRRC28-210ENST00000558879 GPTP24298 496 aa22.2■■□□□ 1.14
LRRC28-210ENST00000558879 SOGA3Q5TF21 947 aa22.2■■□□□ 1.14
LRRC28-210ENST00000558879 NUTM1Q86Y26 1132 aa22.2■■□□□ 1.14
LRRC28-210ENST00000558879 MBIPQ9NS73 344 aa22.2■■□□□ 1.14
LRRC28-210ENST00000558879 ZNF219Q9P2Y4 722 aaPredicted RBP22.2■■□□□ 1.14
LRRC28-210ENST00000558879 LAS1LQ9Y4W2 734 aaKnown RBP22.2■■□□□ 1.14
LRRC28-210ENST00000558879 ERFEQ4G0M1 354 aa22.19■■□□□ 1.14
LRRC28-210ENST00000558879 SUSD4Q5VX71 490 aa22.19■■□□□ 1.14
LRRC28-210ENST00000558879 SCN4AP35499 1836 aa22.19■■□□□ 1.14
LRRC28-210ENST00000558879 LRRC37AA6NMS7 1700 aa22.18■■□□□ 1.14
LRRC28-210ENST00000558879 TOMM70O94826 608 aa22.18■■□□□ 1.14
LRRC28-210ENST00000558879 PARP10Q53GL7 1025 aa22.18■■□□□ 1.14
LRRC28-210ENST00000558879 NECTIN2Q92692 538 aa22.18■■□□□ 1.14
LRRC28-210ENST00000558879 TAOK3Q9H2K8 898 aa22.18■■□□□ 1.14
LRRC28-210ENST00000558879 IFT57Q9NWB7 429 aa22.18■■□□□ 1.14
LRRC28-210ENST00000558879 GTF2E1P29083 439 aaPredicted RBP22.17■■□□□ 1.14
LRRC28-210ENST00000558879 HDGFL1Q5TGJ6 251 aa22.17■■□□□ 1.14
LRRC28-210ENST00000558879 COPS6Q7L5N1 327 aa22.17■■□□□ 1.14
LRRC28-210ENST00000558879 XAGE3Q8WTP9 111 aa22.17■■□□□ 1.14
LRRC28-210ENST00000558879 CHPF2Q9P2E5 772 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms