RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 CNBD1Q8NA66 436 aa21.87■■□□□ 1.09
NEDD4-212ENST00000557845 LAS1LQ9Y4W2 734 aaKnown RBP21.87■■□□□ 1.09
NEDD4-212ENST00000557845 ATP10DQ9P241 1426 aa21.87■■□□□ 1.09
NEDD4-212ENST00000557845 NPHP1O15259 732 aa21.86■■□□□ 1.09
NEDD4-212ENST00000557845 EIF2S2P20042 333 aaKnown RBP21.86■■□□□ 1.09
NEDD4-212ENST00000557845 CCDC184Q52MB2 194 aa21.86■■□□□ 1.09
NEDD4-212ENST00000557845 TTLL6Q8N841 843 aa21.86■■□□□ 1.09
NEDD4-212ENST00000557845 PDZRN3Q9UPQ7 1066 aa21.86■■□□□ 1.09
NEDD4-212ENST00000557845 ERBB4Q15303 1308 aa21.85■■□□□ 1.09
NEDD4-212ENST00000557845 ERVV-1B6SEH8 477 aa21.85■■□□□ 1.09
NEDD4-212ENST00000557845 APAF1O14727 1248 aa21.85■■□□□ 1.09
NEDD4-212ENST00000557845 NIP7Q9Y221 180 aaKnown RBP eCLIP21.85■■□□□ 1.09
NEDD4-212ENST00000557845 ST5P78524 1137 aa21.84■■□□□ 1.09
NEDD4-212ENST00000557845 TTLL7Q6ZT98 887 aa21.84■■□□□ 1.09
NEDD4-212ENST00000557845 NBPF5PQ86XG9 351 aaPredicted RBP21.84■■□□□ 1.09
NEDD4-212ENST00000557845 NUP98P52948 1817 aa21.84■■□□□ 1.09
NEDD4-212ENST00000557845 MAP3K15Q6ZN16 1313 aa21.83■■□□□ 1.09
NEDD4-212ENST00000557845 TPTE2Q6XPS3 522 aa21.83■■□□□ 1.09
NEDD4-212ENST00000557845 ANP32CO43423 234 aa21.82■■□□□ 1.08
NEDD4-212ENST00000557845 PDIA6Q15084 440 aa21.82■■□□□ 1.08
NEDD4-212ENST00000557845 KIF6Q6ZMV9 814 aa21.82■■□□□ 1.08
NEDD4-212ENST00000557845 ZNF622Q969S3 477 aaKnown RBP eCLIP21.82■■□□□ 1.08
NEDD4-212ENST00000557845 CFAP44Q96MT7 982 aa21.82■■□□□ 1.08
NEDD4-212ENST00000557845 GPBP1L1Q9HC44 474 aaPredicted RBP21.82■■□□□ 1.08
NEDD4-212ENST00000557845 ZNF526Q8TF50 670 aaPredicted RBP21.81■■□□□ 1.08
NEDD4-212ENST00000557845 FAM177BA6PVY3 158 aa21.8■■□□□ 1.08
NEDD4-212ENST00000557845 KRT24Q2M2I5 525 aa21.8■■□□□ 1.08
NEDD4-212ENST00000557845 LRP10Q7Z4F1 713 aa21.8■■□□□ 1.08
NEDD4-212ENST00000557845 SBF1O95248 1867 aa21.79■■□□□ 1.08
NEDD4-212ENST00000557845 SRGNP10124 158 aa21.79■■□□□ 1.08
NEDD4-212ENST00000557845 C1QTNF8P60827 252 aa21.79■■□□□ 1.08
NEDD4-212ENST00000557845 C9orf131Q5VYM1 1079 aa21.79■■□□□ 1.08
NEDD4-212ENST00000557845 NECTIN2Q92692 538 aa21.79■■□□□ 1.08
NEDD4-212ENST00000557845 ZBTB3Q9H5J0 574 aa21.79■■□□□ 1.08
NEDD4-212ENST00000557845 COL11A2P13942 1736 aaPredicted RBP21.78■■□□□ 1.08
NEDD4-212ENST00000557845 ANXA1P04083 346 aa21.78■■□□□ 1.08
NEDD4-212ENST00000557845 PROSER3Q2NL68 480 aa21.78■■□□□ 1.08
NEDD4-212ENST00000557845 ZNF853P0CG23 659 aa21.77■■□□□ 1.08
NEDD4-212ENST00000557845 STYK1Q6J9G0 422 aa21.77■■□□□ 1.08
NEDD4-212ENST00000557845 GIGYF2Q6Y7W6 1299 aaKnown RBP21.77■■□□□ 1.08
NEDD4-212ENST00000557845 CNKSR1Q969H4 720 aa21.77■■□□□ 1.08
NEDD4-212ENST00000557845 MASTLQ96GX5 879 aa21.77■■□□□ 1.08
NEDD4-212ENST00000557845 KLRG2A4D1S0 409 aaPredicted RBP21.76■■□□□ 1.07
NEDD4-212ENST00000557845 GTF2E1P29083 439 aaPredicted RBP21.76■■□□□ 1.07
NEDD4-212ENST00000557845 CALD1Q05682 793 aaKnown RBP21.76■■□□□ 1.07
NEDD4-212ENST00000557845 MBIPQ9NS73 344 aa21.76■■□□□ 1.07
NEDD4-212ENST00000557845 COPS6Q7L5N1 327 aa21.75■■□□□ 1.07
NEDD4-212ENST00000557845 ZNF34Q8IZ26 560 aa21.75■■□□□ 1.07
NEDD4-212ENST00000557845 NYXQ9GZU5 481 aa21.75■■□□□ 1.07
NEDD4-212ENST00000557845 MRS2Q9HD23 443 aa21.75■■□□□ 1.07
NEDD4-212ENST00000557845 DDX21Q9NR30 783 aaKnown RBP eCLIP21.75■■□□□ 1.07
NEDD4-212ENST00000557845 RNF181Q9P0P0 153 aa21.75■■□□□ 1.07
NEDD4-212ENST00000557845 C21orf2O43822 256 aa21.74■■□□□ 1.07
NEDD4-212ENST00000557845 HOXB7P09629 217 aa21.74■■□□□ 1.07
NEDD4-212ENST00000557845 GPTP24298 496 aa21.74■■□□□ 1.07
NEDD4-212ENST00000557845 GNAI1P63096 354 aa21.74■■□□□ 1.07
NEDD4-212ENST00000557845 RASSF7Q02833 373 aa21.74■■□□□ 1.07
NEDD4-212ENST00000557845 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
NEDD4-212ENST00000557845 SLX4Q8IY92 1834 aa21.73■■□□□ 1.07
NEDD4-212ENST00000557845 CACNA1SQ13698 1873 aa21.73■■□□□ 1.07
NEDD4-212ENST00000557845 CCDC88AQ3V6T2 1871 aa21.73■■□□□ 1.07
NEDD4-212ENST00000557845 NPR1P16066 1061 aa21.73■■□□□ 1.07
NEDD4-212ENST00000557845 AIMP1Q12904 312 aaKnown RBP21.73■■□□□ 1.07
NEDD4-212ENST00000557845 SUSD4Q5VX71 490 aa21.73■■□□□ 1.07
NEDD4-212ENST00000557845 ZNF219Q9P2Y4 722 aaPredicted RBP21.73■■□□□ 1.07
NEDD4-212ENST00000557845 UBN2Q6ZU65 1347 aa21.73■■□□□ 1.07
NEDD4-212ENST00000557845 HDGFL1Q5TGJ6 251 aa21.72■■□□□ 1.07
NEDD4-212ENST00000557845 DUSP27Q5VZP5 1158 aa21.72■■□□□ 1.07
NEDD4-212ENST00000557845 NUTM1Q86Y26 1132 aa21.72■■□□□ 1.07
NEDD4-212ENST00000557845 XAGE3Q8WTP9 111 aa21.72■■□□□ 1.07
NEDD4-212ENST00000557845 CHPF2Q9P2E5 772 aa21.72■■□□□ 1.07
NEDD4-212ENST00000557845 LMNB1P20700 586 aa21.71■■□□□ 1.07
NEDD4-212ENST00000557845 PRELPP51888 382 aa21.71■■□□□ 1.07
NEDD4-212ENST00000557845 ERFEQ4G0M1 354 aa21.71■■□□□ 1.07
NEDD4-212ENST00000557845 PRPF40BQ6NWY9 871 aaKnown RBP21.71■■□□□ 1.07
NEDD4-212ENST00000557845 ARFGEF2Q9Y6D5 1785 aa21.7■■□□□ 1.06
NEDD4-212ENST00000557845 NFKBIEO00221 500 aa21.7■■□□□ 1.06
NEDD4-212ENST00000557845 PPP1R42Q7Z4L9 355 aa21.7■■□□□ 1.06
NEDD4-212ENST00000557845 DBF4Q9UBU7 674 aaPredicted RBP21.7■■□□□ 1.06
NEDD4-212ENST00000557845 FER1L6Q2WGJ9 1857 aa21.7■■□□□ 1.06
NEDD4-212ENST00000557845 SENP3-EIF4A1A0A087X0R7 540 aa21.69■■□□□ 1.06
NEDD4-212ENST00000557845 KIF3CO14782 793 aa21.69■■□□□ 1.06
NEDD4-212ENST00000557845 CCDC27Q2M243 656 aa21.69■■□□□ 1.06
NEDD4-212ENST00000557845 PARP10Q53GL7 1025 aa21.69■■□□□ 1.06
NEDD4-212ENST00000557845 IBTKQ9P2D0 1353 aaPredicted RBP21.69■■□□□ 1.06
NEDD4-212ENST00000557845 NTSR2O95665 410 aa21.68■■□□□ 1.06
NEDD4-212ENST00000557845 ALDH1B1P30837 517 aa21.68■■□□□ 1.06
NEDD4-212ENST00000557845 HSP90AB3PQ58FF7 597 aa21.68■■□□□ 1.06
NEDD4-212ENST00000557845 C7orf43Q8WVR3 580 aa21.68■■□□□ 1.06
NEDD4-212ENST00000557845 ABCC12Q96J65 1359 aa21.67■■□□□ 1.06
NEDD4-212ENST00000557845 ELL2O00472 640 aaPredicted RBP21.67■■□□□ 1.06
NEDD4-212ENST00000557845 TCIRG1Q13488 830 aa21.67■■□□□ 1.06
NEDD4-212ENST00000557845 SOGA3Q5TF21 947 aa21.67■■□□□ 1.06
NEDD4-212ENST00000557845 CRY2Q49AN0 593 aa21.66■■□□□ 1.06
NEDD4-212ENST00000557845 NCBP3Q53F19 620 aaKnown RBP21.66■■□□□ 1.06
NEDD4-212ENST00000557845 WWC1Q8IX03 1113 aa21.66■■□□□ 1.06
NEDD4-212ENST00000557845 UTP14AQ9BVJ6 771 aaKnown RBP21.66■■□□□ 1.06
NEDD4-212ENST00000557845 HYPKQ9NX55 129 aa21.66■■□□□ 1.06
NEDD4-212ENST00000557845 TNRC6CQ9HCJ0 1690 aaKnown RBP21.66■■□□□ 1.06
NEDD4-212ENST00000557845 ZC3H4Q9UPT8 1303 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms