RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RPLP1P05386 114 aaKnown RBP5.37□□□□□ -1.55
TDP1-217ENST00000557782 ZAP70P43403 619 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 GJA8P48165 433 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 SMTNP53814 917 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 ANAPC15P60006 121 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 SH3BP2P78314 561 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 DHX9Q08211 1270 aaKnown RBP5.37□□□□□ -1.55
TDP1-217ENST00000557782 TCEAL1Q15170 157 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 MTFR1Q15390 333 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 C11orf91Q3C1V1 193 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 TBCELQ5QJ74 424 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 JAZF1Q86VZ6 243 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 NBPF15Q8N660 670 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 NGLY1Q96IV0 654 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 BRINP2Q9C0B6 783 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 SRA1Q9HD15 236 aaKnown RBP5.37□□□□□ -1.55
TDP1-217ENST00000557782 FAM13BQ9NYF5 915 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 CPNE3O75131 537 aaKnown RBP5.36□□□□□ -1.55
TDP1-217ENST00000557782 STAU1O95793 577 aaKnown RBP5.36□□□□□ -1.55
TDP1-217ENST00000557782 ATF4P18848 351 aaPredicted RBP5.36□□□□□ -1.55
TDP1-217ENST00000557782 ORC1Q13415 861 aa5.36□□□□□ -1.55
TDP1-217ENST00000557782 GPRASP2Q96D09 838 aa5.36□□□□□ -1.55
TDP1-217ENST00000557782 GPATCH3Q96I76 525 aa5.36□□□□□ -1.55
TDP1-217ENST00000557782 C12orf49Q9H741 205 aa5.36□□□□□ -1.55
TDP1-217ENST00000557782 WBP1LQ9NX94 342 aa5.36□□□□□ -1.55
TDP1-217ENST00000557782 DMGDHQ9UI17 866 aaKnown RBP5.36□□□□□ -1.55
TDP1-217ENST00000557782 NOP58Q9Y2X3 529 aaKnown RBP5.36□□□□□ -1.55
TDP1-217ENST00000557782 USP31Q70CQ4 1352 aa5.36□□□□□ -1.55
TDP1-217ENST00000557782 SERTM1A2A2V5 107 aa5.35□□□□□ -1.55
TDP1-217ENST00000557782 K7ELQ4 463 aaPredicted RBP5.35□□□□□ -1.55
TDP1-217ENST00000557782 HRO43593 1189 aa5.35□□□□□ -1.55
TDP1-217ENST00000557782 SSBP05455 408 aaKnown RBP eCLIP5.35□□□□□ -1.55
TDP1-217ENST00000557782 XRCC5P13010 732 aaKnown RBP5.35□□□□□ -1.55
TDP1-217ENST00000557782 VARSP26640 1264 aaKnown RBP5.35□□□□□ -1.55
TDP1-217ENST00000557782 PAK2Q13177 524 aa5.35□□□□□ -1.55
TDP1-217ENST00000557782 DGKZQ13574 1117 aa5.35□□□□□ -1.55
TDP1-217ENST00000557782 TAF1CQ15572 869 aaPredicted RBP5.35□□□□□ -1.55
TDP1-217ENST00000557782 RTN1Q16799 776 aa5.35□□□□□ -1.55
TDP1-217ENST00000557782 C8orf34Q49A92 452 aa5.35□□□□□ -1.55
TDP1-217ENST00000557782 SP7Q8TDD2 431 aaPredicted RBP5.35□□□□□ -1.55
TDP1-217ENST00000557782 FCF1Q9Y324 198 aaKnown RBP5.35□□□□□ -1.55
TDP1-217ENST00000557782 CDK2AP1O14519 115 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 OPLAHO14841 1288 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 ST13P50502 369 aaKnown RBP5.34□□□□□ -1.55
TDP1-217ENST00000557782 HIRAP54198 1017 aaPredicted RBP5.34□□□□□ -1.55
TDP1-217ENST00000557782 LSM11P83369 360 aaKnown RBP eCLIP5.34□□□□□ -1.55
TDP1-217ENST00000557782 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.34□□□□□ -1.55
TDP1-217ENST00000557782 FAM26DQ5JW98 314 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 POTEAQ6S8J7 498 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 ETFBKMTQ8IXQ9 262 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 ALDH16A1Q8IZ83 802 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 MKL1Q969V6 931 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 IFT43Q96FT9 208 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 TMPRSS4Q9NRS4 437 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 FAM8A1Q9UBU6 413 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 ZNF232Q9UNY5 417 aa5.34□□□□□ -1.55
TDP1-217ENST00000557782 MRPL42Q9Y6G3 142 aaKnown RBP5.34□□□□□ -1.55
TDP1-217ENST00000557782 ENPP3O14638 875 aa5.33□□□□□ -1.56
TDP1-217ENST00000557782 EMP3P54852 163 aa5.33□□□□□ -1.56
TDP1-217ENST00000557782 TLR1Q15399 786 aa5.33□□□□□ -1.56
TDP1-217ENST00000557782 CCDC181Q5TID7 509 aa5.33□□□□□ -1.56
TDP1-217ENST00000557782 NYAP1Q6ZVC0 841 aa5.33□□□□□ -1.56
TDP1-217ENST00000557782 ZNF784Q8NCA9 323 aaPredicted RBP5.33□□□□□ -1.56
TDP1-217ENST00000557782 RASGRP4Q8TDF6 673 aa5.33□□□□□ -1.56
TDP1-217ENST00000557782 NUDT16Q96DE0 195 aaKnown RBP5.33□□□□□ -1.56
TDP1-217ENST00000557782 SEC16BQ96JE7 1060 aa5.33□□□□□ -1.56
TDP1-217ENST00000557782 NEUROD4Q9HD90 331 aa5.33□□□□□ -1.56
TDP1-217ENST00000557782 EML1O00423 815 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 U2SURPO15042 1029 aaKnown RBP5.32□□□□□ -1.56
TDP1-217ENST00000557782 FSHRP23945 695 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 WNT7BP56706 349 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 NFX1Q12986 1120 aaKnown RBP5.32□□□□□ -1.56
TDP1-217ENST00000557782 ARID5BQ14865 1188 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 TEAD4Q15561 434 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 NKX2-3Q8TAU0 364 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 GPR152Q8TDT2 470 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 MTRQ99707 1265 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 SRCIN1Q9C0H9 1055 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 RAB6BQ9NRW1 208 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 SIRPGQ9P1W8 387 aa5.32□□□□□ -1.56
TDP1-217ENST00000557782 V9GY48 417 aaPredicted RBP5.32□□□□□ -1.56
TDP1-217ENST00000557782 USP17L7P0C7H9 530 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 NOS2P35228 1153 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 SERINC3Q13530 473 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 MEI1Q5TIA1 1274 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 ERMP1Q7Z2K6 904 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 FILIP1Q7Z7B0 1213 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 TREML1Q86YW5 311 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 CERS3Q8IU89 383 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 CCDC74AQ96AQ1 378 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 XAGE2Q96GT9 111 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 SRPK1Q96SB4 655 aaKnown RBP5.31□□□□□ -1.56
TDP1-217ENST00000557782 TRIM55Q9BYV6 548 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 SLKQ9H2G2 1235 aaPredicted RBP5.31□□□□□ -1.56
TDP1-217ENST00000557782 TMX1Q9H3N1 280 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 IL21Q9HBE4 155 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 ARHGEF10LQ9HCE6 1279 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 CABP1Q9NZU7 370 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 KLK14Q9P0G3 267 aa5.31□□□□□ -1.56
TDP1-217ENST00000557782 HCN4Q9Y3Q4 1203 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms