RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 CCDC27Q2M243 656 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 SAMD5Q5TGI4 173 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 RIPOR1Q6ZS17 1223 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 TRIM22Q8IYM9 498 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 PHACTR1Q9C0D0 580 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 GNEQ9Y223 722 aaKnown RBP5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 TGFBR3LH3BV60 316 aa5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 WIPF1O43516 503 aa5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 MSX1P28360 303 aa5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 ITGAEP38570 1179 aa5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 C11orf91Q3C1V1 193 aa5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 ALDH16A1Q8IZ83 802 aa5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 CCDC155Q8N6L0 562 aa5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 HELQQ8TDG4 1101 aa5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 GAS2L1Q99501 681 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 NUCKS1Q9H1E3 243 aaKnown RBP5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 FNDC3AQ9Y2H6 1198 aaKnown RBP5.01□□□□□ -1.61
HMGB1P14-201ENST00000557424 SLC35F4A4IF30 521 aa5□□□□□ -1.61
HMGB1P14-201ENST00000557424 RHOQP17081 205 aa5□□□□□ -1.61
HMGB1P14-201ENST00000557424 ITGA6P23229 1130 aa5□□□□□ -1.61
HMGB1P14-201ENST00000557424 PHKA2P46019 1235 aa5□□□□□ -1.61
HMGB1P14-201ENST00000557424 FKBP5Q13451 457 aaPredicted RBP5□□□□□ -1.61
HMGB1P14-201ENST00000557424 SUZ12Q15022 739 aaKnown RBP5□□□□□ -1.61
HMGB1P14-201ENST00000557424 SND1Q7KZF4 910 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB1P14-201ENST00000557424 SV2AQ7L0J3 742 aa5□□□□□ -1.61
HMGB1P14-201ENST00000557424 GLYCTKQ8IVS8 523 aa5□□□□□ -1.61
HMGB1P14-201ENST00000557424 NGLY1Q96IV0 654 aa5□□□□□ -1.61
HMGB1P14-201ENST00000557424 PRIMPOLQ96LW4 560 aa5□□□□□ -1.61
HMGB1P14-201ENST00000557424 NXF1Q9UBU9 619 aaKnown RBP5□□□□□ -1.61
HMGB1P14-201ENST00000557424 ATXN7L1Q9ULK2 861 aaPredicted RBP5□□□□□ -1.61
HMGB1P14-201ENST00000557424 C21orf2O43822 256 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 WFS1O76024 890 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 NEFLP07196 543 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 FAM157BP0CG42 384 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 FGD1P98174 961 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 EHHADHQ08426 723 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 IRF7Q92985 503 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 CFHR5Q9BXR6 569 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 STIM2Q9P246 746 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 PCDHGC4Q9Y5F7 938 aa4.99□□□□□ -1.61
HMGB1P14-201ENST00000557424 A0A1W2PNR3 127 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 NDUFB5O43674 189 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 ABL1P00519 1130 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 ATP4AP20648 1035 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 ARSDP51689 593 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 INSM1Q01101 510 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 FKBP4Q02790 459 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 TBCELQ5QJ74 424 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 PIK3R5Q8WYR1 880 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 MKNK1Q9BUB5 465 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 GPAMQ9HCL2 828 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 IGSF5Q9NSI5 407 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 AMOTL2Q9Y2J4 779 aa4.98□□□□□ -1.61
HMGB1P14-201ENST00000557424 CDC14CA4D256 554 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 ATXN7O15265 892 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 STAU1O95793 577 aaKnown RBP4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 ERCC3P19447 782 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 MAP2K3P46734 347 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 PDE3BQ13370 1112 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 DGKZQ13574 1117 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 AAMPQ13685 434 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 PCSK7Q16549 785 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 ZNF295-AS1Q8N0V1 137 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 ZDHHC1Q8WTX9 485 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 NANOS1Q8WY41 292 aaKnown RBP4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 CITED4Q96RK1 184 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 HCN4Q9Y3Q4 1203 aa4.97□□□□□ -1.61
HMGB1P14-201ENST00000557424 H3BRB1 525 aa4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 PPFIA3O75145 1194 aa4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 SNRPBP14678 240 aaKnown RBP4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 NFX1Q12986 1120 aaKnown RBP4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 NOM1Q5C9Z4 860 aaKnown RBP4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 GTF3C2Q8WUA4 911 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 IFT43Q96FT9 208 aa4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 SUSD3Q96L08 255 aa4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 CEP63Q96MT8 703 aa4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 PNMA5Q96PV4 448 aa4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 TUT1Q9H6E5 874 aaKnown RBP4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 RUBCNLQ9H714 662 aa4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 QTRT2Q9H974 415 aaKnown RBP4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 AVENQ9NQS1 362 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 KIAA1522Q9P206 1035 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 BIN2Q9UBW5 565 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 PARP3Q9Y6F1 533 aa4.96□□□□□ -1.62
HMGB1P14-201ENST00000557424 H3BM21 787 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 ICMTO60725 284 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 TXLNAP40222 546 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 FAM182BQ5T319 152 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 TXNDC2Q86VQ3 553 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 ZSCAN29Q8IWY8 852 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 ZIC5Q96T25 663 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 BRD7Q9NPI1 651 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 DACH1Q9UI36 760 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 BRPF3Q9ULD4 1205 aa4.95□□□□□ -1.62
HMGB1P14-201ENST00000557424 SENP3-EIF4A1A0A087X0R7 540 aa4.94□□□□□ -1.62
HMGB1P14-201ENST00000557424 PIK3R2O00459 728 aa4.94□□□□□ -1.62
HMGB1P14-201ENST00000557424 TERTO14746 1132 aaKnown RBP4.94□□□□□ -1.62
HMGB1P14-201ENST00000557424 VSIG8P0DPA2 414 aa4.94□□□□□ -1.62
HMGB1P14-201ENST00000557424 LRRC69Q6ZNQ3 347 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms