RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 PLEKHG1Q9ULL1 1385 aa8.13□□□□□ -1.11
PRPF39-211ENST00000556782 MYO5BQ9ULV0 1848 aa8.13□□□□□ -1.11
PRPF39-211ENST00000556782 ADAMTS2O95450 1211 aa8.13□□□□□ -1.11
PRPF39-211ENST00000556782 GPKOWQ92917 476 aaPredicted RBP eCLIP8.13□□□□□ -1.11
PRPF39-211ENST00000556782 SPHKAPQ2M3C7 1700 aa8.12□□□□□ -1.11
PRPF39-211ENST00000556782 LILRB3O75022 631 aa8.12□□□□□ -1.11
PRPF39-211ENST00000556782 PIP4K2BP78356 416 aa8.12□□□□□ -1.11
PRPF39-211ENST00000556782 ERFEQ4G0M1 354 aa8.12□□□□□ -1.11
PRPF39-211ENST00000556782 LYPD4Q6UWN0 246 aa8.12□□□□□ -1.11
PRPF39-211ENST00000556782 SLC26A8Q96RN1 970 aa8.12□□□□□ -1.11
PRPF39-211ENST00000556782 ENAMQ9NRM1 1142 aa8.12□□□□□ -1.11
PRPF39-211ENST00000556782 LIMD1Q9UGP4 676 aa8.12□□□□□ -1.11
PRPF39-211ENST00000556782 NKTRP30414 1462 aaKnown RBP8.12□□□□□ -1.11
PRPF39-211ENST00000556782 XIRP1Q702N8 1843 aaKnown RBP8.11□□□□□ -1.11
PRPF39-211ENST00000556782 CTSOP43234 321 aaPredicted RBP8.11□□□□□ -1.11
PRPF39-211ENST00000556782 SRSF11Q05519 484 aaKnown RBP8.11□□□□□ -1.11
PRPF39-211ENST00000556782 DHX9Q08211 1270 aaKnown RBP8.11□□□□□ -1.11
PRPF39-211ENST00000556782 XP32Q5T750 250 aa8.11□□□□□ -1.11
PRPF39-211ENST00000556782 HELBQ8NG08 1087 aaPredicted RBP8.11□□□□□ -1.11
PRPF39-211ENST00000556782 TRPM2O94759 1503 aa8.11□□□□□ -1.11
PRPF39-211ENST00000556782 DISP3Q9P2K9 1392 aa8.1□□□□□ -1.11
PRPF39-211ENST00000556782 DIP2AQ14689 1571 aa8.1□□□□□ -1.11
PRPF39-211ENST00000556782 MSTNO14793 375 aa8.1□□□□□ -1.11
PRPF39-211ENST00000556782 PPP1R15AO75807 674 aaPredicted RBP8.1□□□□□ -1.11
PRPF39-211ENST00000556782 KCNA6P17658 529 aa8.1□□□□□ -1.11
PRPF39-211ENST00000556782 HSPA1LP34931 641 aa8.1□□□□□ -1.11
PRPF39-211ENST00000556782 RELBQ01201 579 aa8.1□□□□□ -1.11
PRPF39-211ENST00000556782 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.1□□□□□ -1.11
PRPF39-211ENST00000556782 INSM2Q96T92 566 aaPredicted RBP8.1□□□□□ -1.11
PRPF39-211ENST00000556782 POLMQ9NP87 494 aaPredicted RBP8.1□□□□□ -1.11
PRPF39-211ENST00000556782 CDV3Q9UKY7 258 aaKnown RBP8.1□□□□□ -1.11
PRPF39-211ENST00000556782 TMEM94Q12767 1356 aa8.1□□□□□ -1.11
PRPF39-211ENST00000556782 QPCTQ16769 361 aa8.09□□□□□ -1.11
PRPF39-211ENST00000556782 BCANQ96GW7 911 aa8.09□□□□□ -1.11
PRPF39-211ENST00000556782 AGBL1Q96MI9 1066 aa8.09□□□□□ -1.11
PRPF39-211ENST00000556782 KCTD15Q96SI1 283 aaPredicted RBP8.09□□□□□ -1.11
PRPF39-211ENST00000556782 CLTCL1P53675 1640 aa8.09□□□□□ -1.11
PRPF39-211ENST00000556782 ADAMTS13Q76LX8 1427 aa8.09□□□□□ -1.11
PRPF39-211ENST00000556782 ADAM23O75077 832 aa8.08□□□□□ -1.12
PRPF39-211ENST00000556782 CELA2BP08218 269 aaPredicted RBP8.08□□□□□ -1.12
PRPF39-211ENST00000556782 SLC10A4Q96EP9 437 aa8.08□□□□□ -1.12
PRPF39-211ENST00000556782 RSPH6AQ9H0K4 717 aa8.08□□□□□ -1.12
PRPF39-211ENST00000556782 SETBP1Q9Y6X0 1596 aa8.07□□□□□ -1.12
PRPF39-211ENST00000556782 PHF20L1A8MW92 1017 aa8.07□□□□□ -1.12
PRPF39-211ENST00000556782 PLA2G4EQ3MJ16 856 aa8.07□□□□□ -1.12
PRPF39-211ENST00000556782 PROSER2Q86WR7 435 aaPredicted RBP8.07□□□□□ -1.12
PRPF39-211ENST00000556782 RNF217Q8TC41 542 aa8.07□□□□□ -1.12
PRPF39-211ENST00000556782 TBX22Q9Y458 520 aa8.07□□□□□ -1.12
PRPF39-211ENST00000556782 CHD2O14647 1828 aaKnown RBP8.07□□□□□ -1.12
PRPF39-211ENST00000556782 PIK3R4Q99570 1358 aa8.07□□□□□ -1.12
PRPF39-211ENST00000556782 NRXN3Q9Y4C0 1643 aa8.07□□□□□ -1.12
PRPF39-211ENST00000556782 MED1Q15648 1581 aaPredicted RBP8.06□□□□□ -1.12
PRPF39-211ENST00000556782 SENP3-EIF4A1A0A087X0R7 540 aa8.06□□□□□ -1.12
PRPF39-211ENST00000556782 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
PRPF39-211ENST00000556782 PDXDC2PQ6P474 469 aa8.06□□□□□ -1.12
PRPF39-211ENST00000556782 TRIM52Q96A61 297 aa8.06□□□□□ -1.12
PRPF39-211ENST00000556782 ARHGAP9Q9BRR9 750 aa8.06□□□□□ -1.12
PRPF39-211ENST00000556782 ZNF395Q9H8N7 513 aaPredicted RBP8.06□□□□□ -1.12
PRPF39-211ENST00000556782 NEXMIFQ5QGS0 1516 aa8.06□□□□□ -1.12
PRPF39-211ENST00000556782 FAM135BQ49AJ0 1406 aa8.05□□□□□ -1.12
PRPF39-211ENST00000556782 ZNF326Q5BKZ1 582 aaKnown RBP8.05□□□□□ -1.12
PRPF39-211ENST00000556782 ZBTB33Q86T24 672 aa8.05□□□□□ -1.12
PRPF39-211ENST00000556782 BEND7Q8N7W2 519 aaPredicted RBP8.05□□□□□ -1.12
PRPF39-211ENST00000556782 DCAF5Q96JK2 942 aa8.05□□□□□ -1.12
PRPF39-211ENST00000556782 SPOCK3Q9BQ16 436 aa8.05□□□□□ -1.12
PRPF39-211ENST00000556782 MSH6P52701 1360 aa8.05□□□□□ -1.12
PRPF39-211ENST00000556782 PTPRUQ92729 1446 aa8.04□□□□□ -1.12
PRPF39-211ENST00000556782 NCOA3Q9Y6Q9 1424 aa8.04□□□□□ -1.12
PRPF39-211ENST00000556782 XRN1Q8IZH2 1706 aaKnown RBP8.04□□□□□ -1.12
PRPF39-211ENST00000556782 GAS6Q14393 721 aa8.04□□□□□ -1.12
PRPF39-211ENST00000556782 RTL5Q5HYW3 569 aaPredicted RBP8.04□□□□□ -1.12
PRPF39-211ENST00000556782 ILDR2Q71H61 639 aa8.04□□□□□ -1.12
PRPF39-211ENST00000556782 ROBO1Q9Y6N7 1651 aa8.04□□□□□ -1.12
PRPF39-211ENST00000556782 KIF1BO60333 1816 aa8.03□□□□□ -1.12
PRPF39-211ENST00000556782 INTS6LQ5JSJ4 861 aaKnown RBP8.03□□□□□ -1.12
PRPF39-211ENST00000556782 PODNQ7Z5L7 613 aa8.03□□□□□ -1.12
PRPF39-211ENST00000556782 CNTNAP5Q8WYK1 1306 aa8.03□□□□□ -1.12
PRPF39-211ENST00000556782 SH3D19Q5HYK7 790 aa8.02□□□□□ -1.13
PRPF39-211ENST00000556782 GALNT6Q8NCL4 622 aa8.02□□□□□ -1.13
PRPF39-211ENST00000556782 METP08581 1390 aa8.01□□□□□ -1.13
PRPF39-211ENST00000556782 SKIV2LQ15477 1246 aaKnown RBP8.01□□□□□ -1.13
PRPF39-211ENST00000556782 FOXR1Q6PIV2 292 aa8.01□□□□□ -1.13
PRPF39-211ENST00000556782 LYSMD3Q7Z3D4 306 aa8.01□□□□□ -1.13
PRPF39-211ENST00000556782 NEDD1Q8NHV4 660 aa8.01□□□□□ -1.13
PRPF39-211ENST00000556782 KDM4CQ9H3R0 1056 aa8.01□□□□□ -1.13
PRPF39-211ENST00000556782 CUEDC1Q9NWM3 386 aaPredicted RBP8.01□□□□□ -1.13
PRPF39-211ENST00000556782 AMOTL2Q9Y2J4 779 aa8.01□□□□□ -1.13
PRPF39-211ENST00000556782 SETD1AO15047 1707 aaKnown RBP8□□□□□ -1.13
PRPF39-211ENST00000556782 SIPA1L2Q9P2F8 1722 aaPredicted RBP8□□□□□ -1.13
PRPF39-211ENST00000556782 PPP2R2DQ66LE6 453 aa8□□□□□ -1.13
PRPF39-211ENST00000556782 C14orf37Q86TY3 774 aa8□□□□□ -1.13
PRPF39-211ENST00000556782 DDRGK1Q96HY6 314 aa8□□□□□ -1.13
PRPF39-211ENST00000556782 GMCL1Q96IK5 515 aa8□□□□□ -1.13
PRPF39-211ENST00000556782 MPHOSPH9Q99550 1183 aa8□□□□□ -1.13
PRPF39-211ENST00000556782 GNL3Q9BVP2 549 aaKnown RBP eCLIP8□□□□□ -1.13
PRPF39-211ENST00000556782 MBIPQ9NS73 344 aa8□□□□□ -1.13
PRPF39-211ENST00000556782 SLAIN2Q9P270 581 aa8□□□□□ -1.13
PRPF39-211ENST00000556782 FKBPLQ9UIM3 349 aa8□□□□□ -1.13
PRPF39-211ENST00000556782 CCDC144AA2RUR9 1427 aa8□□□□□ -1.13
PRPF39-211ENST00000556782 DCCP43146 1447 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms