RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 ERVV-1B6SEH8 477 aa13.67□□□□□ -0.22
MTHFD1-214ENST00000556771 POLRMTO00411 1230 aaKnown RBP13.67□□□□□ -0.22
MTHFD1-214ENST00000556771 DDR1Q08345 913 aa13.67□□□□□ -0.22
MTHFD1-214ENST00000556771 HDGFL1Q5TGJ6 251 aa13.67□□□□□ -0.22
MTHFD1-214ENST00000556771 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
MTHFD1-214ENST00000556771 DDX21Q9NR30 783 aaKnown RBP eCLIP13.67□□□□□ -0.22
MTHFD1-214ENST00000556771 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
MTHFD1-214ENST00000556771 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 MYL6BP14649 208 aa13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 TGFB2P61812 414 aa13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 PDIA6Q15084 440 aa13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 MIER1Q8N108 512 aa13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 NRXN2Q9P2S2 1712 aa13.66□□□□□ -0.22
MTHFD1-214ENST00000556771 CAPN15O75808 1086 aa13.65□□□□□ -0.22
MTHFD1-214ENST00000556771 SERPINB2P05120 415 aa13.65□□□□□ -0.22
MTHFD1-214ENST00000556771 TBC1D9BQ66K14 1250 aa13.65□□□□□ -0.22
MTHFD1-214ENST00000556771 LRP10Q7Z4F1 713 aa13.65□□□□□ -0.22
MTHFD1-214ENST00000556771 MYH16Q9H6N6 1097 aa13.65□□□□□ -0.22
MTHFD1-214ENST00000556771 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
MTHFD1-214ENST00000556771 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
MTHFD1-214ENST00000556771 NLGN2Q8NFZ4 835 aa13.64□□□□□ -0.23
MTHFD1-214ENST00000556771 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
MTHFD1-214ENST00000556771 ATP10DQ9P241 1426 aa13.64□□□□□ -0.23
MTHFD1-214ENST00000556771 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
MTHFD1-214ENST00000556771 AFDNP55196 1824 aaKnown RBP13.63□□□□□ -0.23
MTHFD1-214ENST00000556771 SENP3-EIF4A1A0A087X0R7 540 aa13.63□□□□□ -0.23
MTHFD1-214ENST00000556771 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
MTHFD1-214ENST00000556771 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
MTHFD1-214ENST00000556771 TTLL7Q6ZT98 887 aa13.63□□□□□ -0.23
MTHFD1-214ENST00000556771 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
MTHFD1-214ENST00000556771 NECTIN2Q92692 538 aa13.63□□□□□ -0.23
MTHFD1-214ENST00000556771 TSR2Q969E8 191 aaKnown RBP13.63□□□□□ -0.23
MTHFD1-214ENST00000556771 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
MTHFD1-214ENST00000556771 PXDNLA1KZ92 1463 aa13.62□□□□□ -0.23
MTHFD1-214ENST00000556771 PROSER3Q2NL68 480 aa13.62□□□□□ -0.23
MTHFD1-214ENST00000556771 TWISTNBQ3B726 338 aaPredicted RBP13.62□□□□□ -0.23
MTHFD1-214ENST00000556771 GIGYF2Q6Y7W6 1299 aaKnown RBP13.62□□□□□ -0.23
MTHFD1-214ENST00000556771 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
MTHFD1-214ENST00000556771 NIP7Q9Y221 180 aaKnown RBP eCLIP13.62□□□□□ -0.23
MTHFD1-214ENST00000556771 NUP98P52948 1817 aa13.62□□□□□ -0.23
MTHFD1-214ENST00000556771 ELL2O00472 640 aaPredicted RBP13.61□□□□□ -0.23
MTHFD1-214ENST00000556771 HSP90AB3PQ58FF7 597 aa13.61□□□□□ -0.23
MTHFD1-214ENST00000556771 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
MTHFD1-214ENST00000556771 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
MTHFD1-214ENST00000556771 ZBTB3Q9H5J0 574 aa13.61□□□□□ -0.23
MTHFD1-214ENST00000556771 IBTKQ9P2D0 1353 aaPredicted RBP13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 E9PSI1 815 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 NPHP1O15259 732 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 ANXA1P04083 346 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 ST5P78524 1137 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 HLFQ16534 295 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 GPR162Q16538 588 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 PARP10Q53GL7 1025 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 TPTE2Q6XPS3 522 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 NBPF5PQ86XG9 351 aaPredicted RBP13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 TSPYL6Q8N831 410 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 PLBD2Q8NHP8 589 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 XAGE3Q8WTP9 111 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 STK31Q9BXU1 1019 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 NYXQ9GZU5 481 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 KIAA1551Q9HCM1 1747 aa13.6□□□□□ -0.23
MTHFD1-214ENST00000556771 GRIN3BO60391 1043 aa13.59□□□□□ -0.23
MTHFD1-214ENST00000556771 PDE6BP35913 854 aa13.59□□□□□ -0.23
MTHFD1-214ENST00000556771 AIMP1Q12904 312 aaKnown RBP13.59□□□□□ -0.23
MTHFD1-214ENST00000556771 PRR5LQ6MZQ0 368 aa13.59□□□□□ -0.23
MTHFD1-214ENST00000556771 BRIP1Q9BX63 1249 aa13.59□□□□□ -0.23
MTHFD1-214ENST00000556771 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
MTHFD1-214ENST00000556771 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-214ENST00000556771 MKRN4PQ13434 485 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-214ENST00000556771 POLA2Q14181 598 aa13.58□□□□□ -0.24
MTHFD1-214ENST00000556771 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
MTHFD1-214ENST00000556771 ZNF34Q8IZ26 560 aa13.58□□□□□ -0.24
MTHFD1-214ENST00000556771 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.24
MTHFD1-214ENST00000556771 N4BP2Q86UW6 1770 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-214ENST00000556771 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
MTHFD1-214ENST00000556771 DPEP1P16444 411 aa13.57□□□□□ -0.24
MTHFD1-214ENST00000556771 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-214ENST00000556771 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
MTHFD1-214ENST00000556771 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-214ENST00000556771 PIM2Q9P1W9 311 aa13.57□□□□□ -0.24
MTHFD1-214ENST00000556771 ANKRD36CQ5JPF3 1778 aa13.57□□□□□ -0.24
MTHFD1-214ENST00000556771 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-214ENST00000556771 DLEC1Q9Y238 1755 aa13.56□□□□□ -0.24
MTHFD1-214ENST00000556771 H0YIN7 160 aa13.56□□□□□ -0.24
MTHFD1-214ENST00000556771 VAMP4O75379 141 aa13.56□□□□□ -0.24
MTHFD1-214ENST00000556771 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-214ENST00000556771 TCIRG1Q13488 830 aa13.56□□□□□ -0.24
MTHFD1-214ENST00000556771 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
MTHFD1-214ENST00000556771 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
MTHFD1-214ENST00000556771 KCNA3P22001 575 aa13.55□□□□□ -0.24
MTHFD1-214ENST00000556771 GPTP24298 496 aa13.55□□□□□ -0.24
MTHFD1-214ENST00000556771 SLFN5Q08AF3 891 aa13.55□□□□□ -0.24
MTHFD1-214ENST00000556771 UBN2Q6ZU65 1347 aa13.55□□□□□ -0.24
MTHFD1-214ENST00000556771 ARFGEF2Q9Y6D5 1785 aa13.54□□□□□ -0.24
MTHFD1-214ENST00000556771 YBX3P16989 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
MTHFD1-214ENST00000556771 TRIM28Q13263 835 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms