RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 KRT24Q2M2I5 525 aa8.94□□□□□ -0.98
PCNX1-210ENST00000555780 VSIG10Q8N0Z9 540 aa8.94□□□□□ -0.98
PCNX1-210ENST00000555780 BCL2L12Q9HB09 334 aa8.94□□□□□ -0.98
PCNX1-210ENST00000555780 SPON1Q9HCB6 807 aa8.94□□□□□ -0.98
PCNX1-210ENST00000555780 MRS2Q9HD23 443 aa8.94□□□□□ -0.98
PCNX1-210ENST00000555780 SRP68Q9UHB9 627 aaKnown RBP8.94□□□□□ -0.98
PCNX1-210ENST00000555780 SOS1Q07889 1333 aaPredicted RBP8.94□□□□□ -0.98
PCNX1-210ENST00000555780 DLG5Q8TDM6 1919 aa8.93□□□□□ -0.98
PCNX1-210ENST00000555780 POTEB3A0JP26 581 aa8.93□□□□□ -0.98
PCNX1-210ENST00000555780 NBPF26B4DH59 902 aa8.93□□□□□ -0.98
PCNX1-210ENST00000555780 SSFA2P28290 1259 aa8.93□□□□□ -0.98
PCNX1-210ENST00000555780 NBPF10Q6P3W6 841 aaKnown RBP8.93□□□□□ -0.98
PCNX1-210ENST00000555780 POTEBQ6S5H4 581 aa8.93□□□□□ -0.98
PCNX1-210ENST00000555780 NBPF15Q8N660 670 aa8.93□□□□□ -0.98
PCNX1-210ENST00000555780 RTF1Q92541 710 aaKnown RBP8.93□□□□□ -0.98
PCNX1-210ENST00000555780 AK7Q96M32 723 aa8.93□□□□□ -0.98
PCNX1-210ENST00000555780 CCDC87Q9NVE4 849 aa8.93□□□□□ -0.98
PCNX1-210ENST00000555780 MAPK8IP3Q9UPT6 1336 aa8.93□□□□□ -0.98
PCNX1-210ENST00000555780 CHL1O00533 1208 aa8.92□□□□□ -0.98
PCNX1-210ENST00000555780 ZNF853P0CG23 659 aa8.92□□□□□ -0.98
PCNX1-210ENST00000555780 GYS1P13807 737 aa8.92□□□□□ -0.98
PCNX1-210ENST00000555780 EIF5P55010 431 aaKnown RBP8.92□□□□□ -0.98
PCNX1-210ENST00000555780 SLC16A10Q8TF71 515 aa8.92□□□□□ -0.98
PCNX1-210ENST00000555780 FMNL2Q96PY5 1086 aa8.92□□□□□ -0.98
PCNX1-210ENST00000555780 KDM3BQ7LBC6 1761 aa8.91□□□□□ -0.98
PCNX1-210ENST00000555780 GIGYF1O75420 1035 aaPredicted RBP8.91□□□□□ -0.98
PCNX1-210ENST00000555780 CANXP27824 592 aaKnown RBP8.91□□□□□ -0.98
PCNX1-210ENST00000555780 FKBP8Q14318 412 aa8.91□□□□□ -0.98
PCNX1-210ENST00000555780 TRAPPC3LQ5T215 181 aa8.91□□□□□ -0.98
PCNX1-210ENST00000555780 LRP10Q7Z4F1 713 aa8.91□□□□□ -0.98
PCNX1-210ENST00000555780 PLCD3Q8N3E9 789 aa8.91□□□□□ -0.98
PCNX1-210ENST00000555780 PNNQ9H307 717 aaKnown RBP8.91□□□□□ -0.98
PCNX1-210ENST00000555780 RTCBQ9Y3I0 505 aaKnown RBP8.91□□□□□ -0.98
PCNX1-210ENST00000555780 DDR1Q08345 913 aa8.9□□□□□ -0.98
PCNX1-210ENST00000555780 PDIA6Q15084 440 aa8.9□□□□□ -0.98
PCNX1-210ENST00000555780 TTC5Q8N0Z6 440 aa8.9□□□□□ -0.98
PCNX1-210ENST00000555780 NLGN2Q8NFZ4 835 aa8.9□□□□□ -0.98
PCNX1-210ENST00000555780 ARXQ96QS3 562 aa8.9□□□□□ -0.98
PCNX1-210ENST00000555780 FHDC1Q9C0D6 1143 aaPredicted RBP8.9□□□□□ -0.98
PCNX1-210ENST00000555780 USP42Q9H9J4 1324 aaKnown RBP8.89□□□□□ -0.99
PCNX1-210ENST00000555780 SNRPA1P09661 255 aaKnown RBP8.89□□□□□ -0.99
PCNX1-210ENST00000555780 TM4SF1P30408 202 aa8.89□□□□□ -0.99
PCNX1-210ENST00000555780 USPL1Q5W0Q7 1092 aa8.89□□□□□ -0.99
PCNX1-210ENST00000555780 C3orf67Q6ZVT6 689 aa8.89□□□□□ -0.99
PCNX1-210ENST00000555780 FAM9BQ8IZU0 186 aa8.89□□□□□ -0.99
PCNX1-210ENST00000555780 FLAD1Q8NFF5 587 aa8.89□□□□□ -0.99
PCNX1-210ENST00000555780 SYT17Q9BSW7 474 aa8.89□□□□□ -0.99
PCNX1-210ENST00000555780 C4AP0C0L4 1744 aa8.88□□□□□ -0.99
PCNX1-210ENST00000555780 ANXA1P04083 346 aa8.88□□□□□ -0.99
PCNX1-210ENST00000555780 PROSER3Q2NL68 480 aa8.88□□□□□ -0.99
PCNX1-210ENST00000555780 WWC1Q8IX03 1113 aa8.88□□□□□ -0.99
PCNX1-210ENST00000555780 MBIPQ9NS73 344 aa8.88□□□□□ -0.99
PCNX1-210ENST00000555780 NARFQ9UHQ1 456 aa8.88□□□□□ -0.99
PCNX1-210ENST00000555780 TSPYL4Q9UJ04 414 aa8.88□□□□□ -0.99
PCNX1-210ENST00000555780 TBC1D2BQ9UPU7 963 aa8.88□□□□□ -0.99
PCNX1-210ENST00000555780 COL15A1P39059 1388 aa8.87□□□□□ -0.99
PCNX1-210ENST00000555780 CAMTA2O94983 1202 aa8.87□□□□□ -0.99
PCNX1-210ENST00000555780 NEFMP07197 916 aa8.87□□□□□ -0.99
PCNX1-210ENST00000555780 IL6STP40189 918 aaPredicted RBP8.87□□□□□ -0.99
PCNX1-210ENST00000555780 NUBP1P53384 320 aa8.87□□□□□ -0.99
PCNX1-210ENST00000555780 TTLL7Q6ZT98 887 aa8.87□□□□□ -0.99
PCNX1-210ENST00000555780 C8orf58Q8NAV2 365 aa8.87□□□□□ -0.99
PCNX1-210ENST00000555780 CFAP44Q96MT7 982 aa8.87□□□□□ -0.99
PCNX1-210ENST00000555780 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
PCNX1-210ENST00000555780 ZNF521Q96K83 1311 aa8.86□□□□□ -0.99
PCNX1-210ENST00000555780 POLRMTO00411 1230 aaKnown RBP8.86□□□□□ -0.99
PCNX1-210ENST00000555780 STARD3NLO95772 234 aa8.86□□□□□ -0.99
PCNX1-210ENST00000555780 MMP10P09238 476 aa8.86□□□□□ -0.99
PCNX1-210ENST00000555780 RFC4P35249 363 aa8.86□□□□□ -0.99
PCNX1-210ENST00000555780 NFIXQ14938 502 aa8.86□□□□□ -0.99
PCNX1-210ENST00000555780 CCDC27Q2M243 656 aa8.86□□□□□ -0.99
PCNX1-210ENST00000555780 TSPYL6Q8N831 410 aa8.86□□□□□ -0.99
PCNX1-210ENST00000555780 TSR2Q969E8 191 aaKnown RBP8.86□□□□□ -0.99
PCNX1-210ENST00000555780 FAM212AQ96EL1 285 aa8.86□□□□□ -0.99
PCNX1-210ENST00000555780 TEX13AQ9BXU3 409 aaPredicted RBP8.86□□□□□ -0.99
PCNX1-210ENST00000555780 BABAM1Q9NWV8 329 aa8.86□□□□□ -0.99
PCNX1-210ENST00000555780 LAS1LQ9Y4W2 734 aaKnown RBP8.86□□□□□ -0.99
PCNX1-210ENST00000555780 LMOD3Q0VAK6 560 aa8.85□□□□□ -0.99
PCNX1-210ENST00000555780 HLFQ16534 295 aa8.85□□□□□ -0.99
PCNX1-210ENST00000555780 TBC1D9BQ66K14 1250 aa8.85□□□□□ -0.99
PCNX1-210ENST00000555780 DIEXFQ68CQ4 756 aaKnown RBP8.85□□□□□ -0.99
PCNX1-210ENST00000555780 NECTIN2Q92692 538 aa8.85□□□□□ -0.99
PCNX1-210ENST00000555780 UTRNP46939 3433 aa8.84□□□□□ -0.99
PCNX1-210ENST00000555780 CCER2I3L3R5 266 aa8.84□□□□□ -0.99
PCNX1-210ENST00000555780 EIF2S2P20042 333 aaKnown RBP8.84□□□□□ -0.99
PCNX1-210ENST00000555780 KCNA3P22001 575 aa8.84□□□□□ -0.99
PCNX1-210ENST00000555780 POLD1P28340 1107 aa8.84□□□□□ -0.99
PCNX1-210ENST00000555780 NLGN1Q8N2Q7 840 aa8.84□□□□□ -0.99
PCNX1-210ENST00000555780 KIAA1551Q9HCM1 1747 aa8.84□□□□□ -0.99
PCNX1-210ENST00000555780 IFT57Q9NWB7 429 aa8.84□□□□□ -0.99
PCNX1-210ENST00000555780 PPP1R1BQ9UD71 204 aaPredicted RBP8.84□□□□□ -0.99
PCNX1-210ENST00000555780 CARMIL3Q8ND23 1372 aa8.84□□□□□ -0.99
PCNX1-210ENST00000555780 C10orf71Q711Q0 1435 aa8.83□□□□□ -1
PCNX1-210ENST00000555780 ELL2O00472 640 aaPredicted RBP8.83□□□□□ -1
PCNX1-210ENST00000555780 YBX3P16989 372 aaKnown RBP eCLIP8.83□□□□□ -1
PCNX1-210ENST00000555780 HMGB2P26583 209 aaKnown RBP8.83□□□□□ -1
PCNX1-210ENST00000555780 DUSP27Q5VZP5 1158 aa8.83□□□□□ -1
PCNX1-210ENST00000555780 DZIP3Q86Y13 1208 aaKnown RBP8.83□□□□□ -1
PCNX1-210ENST00000555780 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
PCNX1-210ENST00000555780 NGEFQ8N5V2 710 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms