RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SETDB2Q96T68 719 aa12.54□□□□□ -0.4
ACTN1-215ENST00000555616 ANKRD31Q8N7Z5 1873 aa12.54□□□□□ -0.4
ACTN1-215ENST00000555616 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-215ENST00000555616 APAF1O14727 1248 aa12.53□□□□□ -0.4
ACTN1-215ENST00000555616 DALRD3Q5D0E6 543 aaKnown RBP12.53□□□□□ -0.4
ACTN1-215ENST00000555616 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
ACTN1-215ENST00000555616 CNBD1Q8NA66 436 aa12.53□□□□□ -0.4
ACTN1-215ENST00000555616 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
ACTN1-215ENST00000555616 ERVV-1B6SEH8 477 aa12.52□□□□□ -0.41
ACTN1-215ENST00000555616 PDIA6Q15084 440 aa12.52□□□□□ -0.41
ACTN1-215ENST00000555616 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
ACTN1-215ENST00000555616 CFAP44Q96MT7 982 aa12.52□□□□□ -0.41
ACTN1-215ENST00000555616 PDZRN3Q9UPQ7 1066 aa12.52□□□□□ -0.41
ACTN1-215ENST00000555616 MAP3K15Q6ZN16 1313 aa12.52□□□□□ -0.41
ACTN1-215ENST00000555616 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-215ENST00000555616 HOXB7P09629 217 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 MYL6BP14649 208 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 PDE6BP35913 854 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 ST5P78524 1137 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 CALD1Q05682 793 aaKnown RBP12.51□□□□□ -0.41
ACTN1-215ENST00000555616 HLFQ16534 295 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 TTLL7Q6ZT98 887 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 C2CD5Q86YS7 1000 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
ACTN1-215ENST00000555616 H0YIN7 160 aa12.5□□□□□ -0.41
ACTN1-215ENST00000555616 CENPBP07199 599 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-215ENST00000555616 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
ACTN1-215ENST00000555616 PROSER3Q2NL68 480 aa12.5□□□□□ -0.41
ACTN1-215ENST00000555616 NBPF5PQ86XG9 351 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-215ENST00000555616 NIP7Q9Y221 180 aaKnown RBP eCLIP12.5□□□□□ -0.41
ACTN1-215ENST00000555616 RIC1Q4ADV7 1423 aa12.49□□□□□ -0.41
ACTN1-215ENST00000555616 EIF2S2P20042 333 aaKnown RBP12.49□□□□□ -0.41
ACTN1-215ENST00000555616 ARHGAP27Q6ZUM4 889 aa12.49□□□□□ -0.41
ACTN1-215ENST00000555616 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
ACTN1-215ENST00000555616 TTLL6Q8N841 843 aa12.49□□□□□ -0.41
ACTN1-215ENST00000555616 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
ACTN1-215ENST00000555616 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
ACTN1-215ENST00000555616 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
ACTN1-215ENST00000555616 ABCC12Q96J65 1359 aa12.48□□□□□ -0.41
ACTN1-215ENST00000555616 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
ACTN1-215ENST00000555616 UBN2Q6ZU65 1347 aa12.48□□□□□ -0.41
ACTN1-215ENST00000555616 NPHP1O15259 732 aa12.48□□□□□ -0.41
ACTN1-215ENST00000555616 GNAI1P63096 354 aa12.48□□□□□ -0.41
ACTN1-215ENST00000555616 CCDC27Q2M243 656 aa12.48□□□□□ -0.41
ACTN1-215ENST00000555616 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
ACTN1-215ENST00000555616 ZBTB3Q9H5J0 574 aa12.48□□□□□ -0.41
ACTN1-215ENST00000555616 KLRG2A4D1S0 409 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-215ENST00000555616 SRGNP10124 158 aa12.47□□□□□ -0.41
ACTN1-215ENST00000555616 HDGFL1Q5TGJ6 251 aa12.47□□□□□ -0.41
ACTN1-215ENST00000555616 STYK1Q6J9G0 422 aa12.47□□□□□ -0.41
ACTN1-215ENST00000555616 TPTE2Q6XPS3 522 aa12.47□□□□□ -0.41
ACTN1-215ENST00000555616 GIGYF2Q6Y7W6 1299 aaKnown RBP12.47□□□□□ -0.41
ACTN1-215ENST00000555616 DDX21Q9NR30 783 aaKnown RBP eCLIP12.47□□□□□ -0.41
ACTN1-215ENST00000555616 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
ACTN1-215ENST00000555616 NUP98P52948 1817 aa12.46□□□□□ -0.41
ACTN1-215ENST00000555616 SENP3-EIF4A1A0A087X0R7 540 aa12.46□□□□□ -0.41
ACTN1-215ENST00000555616 ANXA1P04083 346 aa12.46□□□□□ -0.41
ACTN1-215ENST00000555616 DUSP27Q5VZP5 1158 aa12.46□□□□□ -0.41
ACTN1-215ENST00000555616 ZNF34Q8IZ26 560 aa12.46□□□□□ -0.41
ACTN1-215ENST00000555616 NECTIN2Q92692 538 aa12.46□□□□□ -0.41
ACTN1-215ENST00000555616 NYXQ9GZU5 481 aa12.46□□□□□ -0.41
ACTN1-215ENST00000555616 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.41
ACTN1-215ENST00000555616 C9orf131Q5VYM1 1079 aa12.45□□□□□ -0.42
ACTN1-215ENST00000555616 XAGE3Q8WTP9 111 aa12.45□□□□□ -0.42
ACTN1-215ENST00000555616 ZNF622Q969S3 477 aaKnown RBP eCLIP12.45□□□□□ -0.42
ACTN1-215ENST00000555616 MASTLQ96GX5 879 aa12.45□□□□□ -0.42
ACTN1-215ENST00000555616 DBF4Q9UBU7 674 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-215ENST00000555616 ANKRD36CQ5JPF3 1778 aa12.45□□□□□ -0.42
ACTN1-215ENST00000555616 IL16Q14005 1332 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 FAM177BA6PVY3 158 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 NFKBIEO00221 500 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 NTSR2O95665 410 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 NPR1P16066 1061 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 GPTP24298 496 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 RASSF7Q02833 373 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 CRY2Q49AN0 593 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
ACTN1-215ENST00000555616 COPS6Q7L5N1 327 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 WWC1Q8IX03 1113 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
ACTN1-215ENST00000555616 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-215ENST00000555616 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-215ENST00000555616 ZC3H4Q9UPT8 1303 aaKnown RBP12.43□□□□□ -0.42
ACTN1-215ENST00000555616 HSP90AB3PQ58FF7 597 aa12.43□□□□□ -0.42
ACTN1-215ENST00000555616 SUSD4Q5VX71 490 aa12.43□□□□□ -0.42
ACTN1-215ENST00000555616 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
ACTN1-215ENST00000555616 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
ACTN1-215ENST00000555616 LTBP3Q9NS15 1303 aa12.42□□□□□ -0.42
ACTN1-215ENST00000555616 C21orf2O43822 256 aa12.42□□□□□ -0.42
ACTN1-215ENST00000555616 LMNB1P20700 586 aa12.42□□□□□ -0.42
ACTN1-215ENST00000555616 GTF2E1P29083 439 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-215ENST00000555616 PRELPP51888 382 aa12.42□□□□□ -0.42
ACTN1-215ENST00000555616 AIMP1Q12904 312 aaKnown RBP12.42□□□□□ -0.42
ACTN1-215ENST00000555616 ERFEQ4G0M1 354 aa12.42□□□□□ -0.42
ACTN1-215ENST00000555616 C8orf58Q8NAV2 365 aa12.42□□□□□ -0.42
ACTN1-215ENST00000555616 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms