RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 PROSER3Q2NL68 480 aa26.51■■□□□ 1.83
FOXA1-203ENST00000553751 TTLL7Q6ZT98 887 aa26.51■■□□□ 1.83
FOXA1-203ENST00000553751 SETDB2Q96T68 719 aa26.5■■□□□ 1.83
FOXA1-203ENST00000553751 MAP3K15Q6ZN16 1313 aa26.49■■□□□ 1.83
FOXA1-203ENST00000553751 GRIN3BO60391 1043 aa26.49■■□□□ 1.83
FOXA1-203ENST00000553751 KCNA3P22001 575 aa26.49■■□□□ 1.83
FOXA1-203ENST00000553751 HLFQ16534 295 aa26.49■■□□□ 1.83
FOXA1-203ENST00000553751 NECTIN2Q92692 538 aa26.49■■□□□ 1.83
FOXA1-203ENST00000553751 CHD4Q14839 1912 aa26.48■■□□□ 1.83
FOXA1-203ENST00000553751 ERVV-1B6SEH8 477 aa26.48■■□□□ 1.83
FOXA1-203ENST00000553751 ANXA1P04083 346 aa26.48■■□□□ 1.83
FOXA1-203ENST00000553751 DUSP27Q5VZP5 1158 aa26.48■■□□□ 1.83
FOXA1-203ENST00000553751 PRR5LQ6MZQ0 368 aa26.48■■□□□ 1.83
FOXA1-203ENST00000553751 KIF6Q6ZMV9 814 aa26.48■■□□□ 1.83
FOXA1-203ENST00000553751 ANKRD31Q8N7Z5 1873 aa26.47■■□□□ 1.83
FOXA1-203ENST00000553751 NUP98P52948 1817 aa26.46■■□□□ 1.83
FOXA1-203ENST00000553751 YY1P25490 414 aa26.46■■□□□ 1.83
FOXA1-203ENST00000553751 CHRNA5P30532 468 aa26.46■■□□□ 1.83
FOXA1-203ENST00000553751 HDGFL1Q5TGJ6 251 aa26.46■■□□□ 1.83
FOXA1-203ENST00000553751 ATP10DQ9P241 1426 aa26.46■■□□□ 1.83
FOXA1-203ENST00000553751 DLEC1Q9Y238 1755 aa26.46■■□□□ 1.83
FOXA1-203ENST00000553751 IL16Q14005 1332 aa26.45■■□□□ 1.83
FOXA1-203ENST00000553751 CNBD1Q8NA66 436 aa26.45■■□□□ 1.82
FOXA1-203ENST00000553751 ZBTB3Q9H5J0 574 aa26.45■■□□□ 1.82
FOXA1-203ENST00000553751 DDX21Q9NR30 783 aaKnown RBP eCLIP26.45■■□□□ 1.82
FOXA1-203ENST00000553751 CHPF2Q9P2E5 772 aa26.45■■□□□ 1.82
FOXA1-203ENST00000553751 NIP7Q9Y221 180 aaKnown RBP eCLIP26.45■■□□□ 1.82
FOXA1-203ENST00000553751 CCDC24Q8N4L8 307 aa26.43■■□□□ 1.82
FOXA1-203ENST00000553751 TSR2Q969E8 191 aaKnown RBP26.43■■□□□ 1.82
FOXA1-203ENST00000553751 PIM2Q9P1W9 311 aa26.43■■□□□ 1.82
FOXA1-203ENST00000553751 BCS1LQ9Y276 419 aa26.43■■□□□ 1.82
FOXA1-203ENST00000553751 NBPF5PQ86XG9 351 aaPredicted RBP26.42■■□□□ 1.82
FOXA1-203ENST00000553751 C8orf58Q8NAV2 365 aa26.42■■□□□ 1.82
FOXA1-203ENST00000553751 BRIP1Q9BX63 1249 aa26.42■■□□□ 1.82
FOXA1-203ENST00000553751 SALL2Q9Y467 1007 aaPredicted RBP26.42■■□□□ 1.82
FOXA1-203ENST00000553751 COL11A2P13942 1736 aaPredicted RBP26.42■■□□□ 1.82
FOXA1-203ENST00000553751 XAGE3Q8WTP9 111 aa26.41■■□□□ 1.82
FOXA1-203ENST00000553751 ARFGEF1Q9Y6D6 1849 aa26.41■■□□□ 1.82
FOXA1-203ENST00000553751 CCER2I3L3R5 266 aa26.4■■□□□ 1.82
FOXA1-203ENST00000553751 ELL2O00472 640 aaPredicted RBP26.4■■□□□ 1.82
FOXA1-203ENST00000553751 GIGYF2Q6Y7W6 1299 aaKnown RBP26.4■■□□□ 1.82
FOXA1-203ENST00000553751 COPS6Q7L5N1 327 aa26.4■■□□□ 1.82
FOXA1-203ENST00000553751 DBF4Q9UBU7 674 aaPredicted RBP26.4■■□□□ 1.82
FOXA1-203ENST00000553751 NPHP1O15259 732 aa26.39■■□□□ 1.82
FOXA1-203ENST00000553751 ST5P78524 1137 aa26.39■■□□□ 1.82
FOXA1-203ENST00000553751 C2CD5Q86YS7 1000 aa26.39■■□□□ 1.82
FOXA1-203ENST00000553751 WDR63Q8IWG1 891 aa26.39■■□□□ 1.82
FOXA1-203ENST00000553751 UBN2Q6ZU65 1347 aa26.39■■□□□ 1.81
FOXA1-203ENST00000553751 AIMP1Q12904 312 aaKnown RBP26.38■■□□□ 1.81
FOXA1-203ENST00000553751 DALRD3Q5D0E6 543 aaKnown RBP26.38■■□□□ 1.81
FOXA1-203ENST00000553751 PDE6BP35913 854 aa26.37■■□□□ 1.81
FOXA1-203ENST00000553751 ZNF34Q8IZ26 560 aa26.37■■□□□ 1.81
FOXA1-203ENST00000553751 TSPYL6Q8N831 410 aa26.37■■□□□ 1.81
FOXA1-203ENST00000553751 FANCIQ9NVI1 1328 aa26.37■■□□□ 1.81
FOXA1-203ENST00000553751 IBTKQ9P2D0 1353 aaPredicted RBP26.36■■□□□ 1.81
FOXA1-203ENST00000553751 FAM177BA6PVY3 158 aa26.36■■□□□ 1.81
FOXA1-203ENST00000553751 H0YIN7 160 aa26.36■■□□□ 1.81
FOXA1-203ENST00000553751 GPTP24298 496 aa26.36■■□□□ 1.81
FOXA1-203ENST00000553751 TPTE2Q6XPS3 522 aa26.36■■□□□ 1.81
FOXA1-203ENST00000553751 ANKRD36CQ5JPF3 1778 aa26.35■■□□□ 1.81
FOXA1-203ENST00000553751 HYPKQ9NX55 129 aa26.35■■□□□ 1.81
FOXA1-203ENST00000553751 PDZRN3Q9UPQ7 1066 aa26.35■■□□□ 1.81
FOXA1-203ENST00000553751 ABCC12Q96J65 1359 aa26.33■■□□□ 1.81
FOXA1-203ENST00000553751 TNRC6CQ9HCJ0 1690 aaKnown RBP26.33■■□□□ 1.81
FOXA1-203ENST00000553751 ZNF521Q96K83 1311 aa26.33■■□□□ 1.81
FOXA1-203ENST00000553751 DIEXFQ68CQ4 756 aaKnown RBP26.32■■□□□ 1.8
FOXA1-203ENST00000553751 NYXQ9GZU5 481 aa26.32■■□□□ 1.8
FOXA1-203ENST00000553751 SPINK5Q9NQ38 1064 aaPredicted RBP26.32■■□□□ 1.8
FOXA1-203ENST00000553751 SUSD4Q5VX71 490 aa26.31■■□□□ 1.8
FOXA1-203ENST00000553751 TTLL6Q8N841 843 aa26.31■■□□□ 1.8
FOXA1-203ENST00000553751 KLRG2A4D1S0 409 aaPredicted RBP26.3■■□□□ 1.8
FOXA1-203ENST00000553751 NTSR2O95665 410 aa26.3■■□□□ 1.8
FOXA1-203ENST00000553751 SRGNP10124 158 aa26.3■■□□□ 1.8
FOXA1-203ENST00000553751 TWISTNBQ3B726 338 aaPredicted RBP26.3■■□□□ 1.8
FOXA1-203ENST00000553751 PARP10Q53GL7 1025 aa26.3■■□□□ 1.8
FOXA1-203ENST00000553751 HSP90AB3PQ58FF7 597 aa26.3■■□□□ 1.8
FOXA1-203ENST00000553751 CCDC30Q5VVM6 783 aa26.3■■□□□ 1.8
FOXA1-203ENST00000553751 NUTM1Q86Y26 1132 aa26.3■■□□□ 1.8
FOXA1-203ENST00000553751 PLBD2Q8NHP8 589 aa26.3■■□□□ 1.8
FOXA1-203ENST00000553751 RIC1Q4ADV7 1423 aa26.3■■□□□ 1.8
FOXA1-203ENST00000553751 ARFGEF2Q9Y6D5 1785 aa26.29■■□□□ 1.8
FOXA1-203ENST00000553751 GTF2E1P29083 439 aaPredicted RBP26.29■■□□□ 1.8
FOXA1-203ENST00000553751 ERFEQ4G0M1 354 aa26.29■■□□□ 1.8
FOXA1-203ENST00000553751 ANKRD13DQ6ZTN6 518 aa26.29■■□□□ 1.8
FOXA1-203ENST00000553751 ZNF622Q969S3 477 aaKnown RBP eCLIP26.29■■□□□ 1.8
FOXA1-203ENST00000553751 CHMP4AQ9BY43 222 aa26.29■■□□□ 1.8
FOXA1-203ENST00000553751 PHAXQ9H814 394 aaKnown RBP26.29■■□□□ 1.8
FOXA1-203ENST00000553751 TCIRG1Q13488 830 aa26.28■■□□□ 1.8
FOXA1-203ENST00000553751 STYK1Q6J9G0 422 aa26.28■■□□□ 1.8
FOXA1-203ENST00000553751 ARHGAP27Q6ZUM4 889 aa26.28■■□□□ 1.8
FOXA1-203ENST00000553751 ADCY9O60503 1353 aa26.28■■□□□ 1.8
FOXA1-203ENST00000553751 ZNF784Q8NCA9 323 aaPredicted RBP26.27■■□□□ 1.8
FOXA1-203ENST00000553751 MASTLQ96GX5 879 aa26.27■■□□□ 1.8
FOXA1-203ENST00000553751 PPP1R42Q7Z4L9 355 aa26.26■■□□□ 1.79
FOXA1-203ENST00000553751 NLRP10Q86W26 655 aa26.26■■□□□ 1.79
FOXA1-203ENST00000553751 MYH16Q9H6N6 1097 aa26.26■■□□□ 1.79
FOXA1-203ENST00000553751 GOLGA2Q08379 1002 aa26.25■■□□□ 1.79
FOXA1-203ENST00000553751 CACNA1SQ13698 1873 aa26.24■■□□□ 1.79
FOXA1-203ENST00000553751 RNF123Q5XPI4 1314 aa26.24■■□□□ 1.79
FOXA1-203ENST00000553751 EXOSC9Q06265 439 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms