RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ST5P78524 1137 aa16.97■□□□□ 0.31
ACTN1-207ENST00000553290 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
ACTN1-207ENST00000553290 ERVV-1B6SEH8 477 aa16.96■□□□□ 0.31
ACTN1-207ENST00000553290 C1QTNF8P60827 252 aa16.96■□□□□ 0.31
ACTN1-207ENST00000553290 NBPF5PQ86XG9 351 aaPredicted RBP16.96■□□□□ 0.31
ACTN1-207ENST00000553290 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
ACTN1-207ENST00000553290 CHL1O00533 1208 aa16.95■□□□□ 0.3
ACTN1-207ENST00000553290 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
ACTN1-207ENST00000553290 CCDC24Q8N4L8 307 aa16.95■□□□□ 0.3
ACTN1-207ENST00000553290 NGEFQ8N5V2 710 aa16.95■□□□□ 0.3
ACTN1-207ENST00000553290 NIP7Q9Y221 180 aaKnown RBP eCLIP16.95■□□□□ 0.3
ACTN1-207ENST00000553290 MYL6BP14649 208 aa16.94■□□□□ 0.3
ACTN1-207ENST00000553290 HLFQ16534 295 aa16.94■□□□□ 0.3
ACTN1-207ENST00000553290 TPTE2Q6XPS3 522 aa16.94■□□□□ 0.3
ACTN1-207ENST00000553290 ZNF526Q8TF50 670 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-207ENST00000553290 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.32e-7■□□□□ 10.5
ACTN1-207ENST00000553290 MAP3K15Q6ZN16 1313 aa16.94■□□□□ 0.3
ACTN1-207ENST00000553290 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
ACTN1-207ENST00000553290 C9orf131Q5VYM1 1079 aa16.93■□□□□ 0.3
ACTN1-207ENST00000553290 NUP98P52948 1817 aa16.93■□□□□ 0.3
ACTN1-207ENST00000553290 TTLL7Q6ZT98 887 aa16.92■□□□□ 0.3
ACTN1-207ENST00000553290 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
ACTN1-207ENST00000553290 SBF1O95248 1867 aa16.91■□□□□ 0.3
ACTN1-207ENST00000553290 COL11A2P13942 1736 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-207ENST00000553290 APAF1O14727 1248 aa16.91■□□□□ 0.3
ACTN1-207ENST00000553290 SRGNP10124 158 aa16.91■□□□□ 0.3
ACTN1-207ENST00000553290 STYK1Q6J9G0 422 aa16.91■□□□□ 0.3
ACTN1-207ENST00000553290 CNKSR1Q969H4 720 aa16.91■□□□□ 0.3
ACTN1-207ENST00000553290 MASTLQ96GX5 879 aa16.91■□□□□ 0.3
ACTN1-207ENST00000553290 RNF181Q9P0P0 153 aa16.91■□□□□ 0.3
ACTN1-207ENST00000553290 PDIA6Q15084 440 aa16.9■□□□□ 0.3
ACTN1-207ENST00000553290 CFAP44Q96MT7 982 aa16.9■□□□□ 0.3
ACTN1-207ENST00000553290 NYXQ9GZU5 481 aa16.9■□□□□ 0.3
ACTN1-207ENST00000553290 KLRG2A4D1S0 409 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-207ENST00000553290 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
ACTN1-207ENST00000553290 GTF2E1P29083 439 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-207ENST00000553290 CALD1Q05682 793 aaKnown RBP16.89■□□□□ 0.29
ACTN1-207ENST00000553290 LRP10Q7Z4F1 713 aa16.89■□□□□ 0.29
ACTN1-207ENST00000553290 ZBTB3Q9H5J0 574 aa16.89■□□□□ 0.29
ACTN1-207ENST00000553290 ANP32CO43423 234 aa16.88■□□□□ 0.29
ACTN1-207ENST00000553290 HOXB7P09629 217 aa16.88■□□□□ 0.29
ACTN1-207ENST00000553290 LMNB1P20700 586 aa16.88■□□□□ 0.29
ACTN1-207ENST00000553290 RASSF7Q02833 373 aa16.88■□□□□ 0.29
ACTN1-207ENST00000553290 GIGYF2Q6Y7W6 1299 aaKnown RBP16.88■□□□□ 0.29
ACTN1-207ENST00000553290 C21orf2O43822 256 aa16.87■□□□□ 0.29
ACTN1-207ENST00000553290 NPR1P16066 1061 aa16.87■□□□□ 0.29
ACTN1-207ENST00000553290 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
ACTN1-207ENST00000553290 ZC3H4Q9UPT8 1303 aaKnown RBP16.87■□□□□ 0.29
ACTN1-207ENST00000553290 IBTKQ9P2D0 1353 aaPredicted RBP16.87■□□□□ 0.29
ACTN1-207ENST00000553290 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
ACTN1-207ENST00000553290 GNAI1P63096 354 aa16.86■□□□□ 0.29
ACTN1-207ENST00000553290 KRT24Q2M2I5 525 aa16.86■□□□□ 0.29
ACTN1-207ENST00000553290 PROSER3Q2NL68 480 aa16.86■□□□□ 0.29
ACTN1-207ENST00000553290 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
ACTN1-207ENST00000553290 SOGA3Q5TF21 947 aa16.86■□□□□ 0.29
ACTN1-207ENST00000553290 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
ACTN1-207ENST00000553290 ZNF34Q8IZ26 560 aa16.86■□□□□ 0.29
ACTN1-207ENST00000553290 DDX21Q9NR30 783 aaKnown RBP eCLIP16.86■□□□□ 0.29
ACTN1-207ENST00000553290 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
ACTN1-207ENST00000553290 SLX4Q8IY92 1834 aa16.86■□□□□ 0.29
ACTN1-207ENST00000553290 CACNA1SQ13698 1873 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 NFKBIEO00221 500 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 KIF3CO14782 793 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 ANXA1P04083 346 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 ZNF853P0CG23 659 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 GPTP24298 496 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 PARP10Q53GL7 1025 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 HDGFL1Q5TGJ6 251 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 COPS6Q7L5N1 327 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 MBIPQ9NS73 344 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 ZNF219Q9P2Y4 722 aaPredicted RBP16.85■□□□□ 0.29
ACTN1-207ENST00000553290 UBN2Q6ZU65 1347 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 KDM2BQ8NHM5 1336 aa16.85■□□□□ 0.29
ACTN1-207ENST00000553290 FER1L6Q2WGJ9 1857 aa16.84■□□□□ 0.29
ACTN1-207ENST00000553290 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
ACTN1-207ENST00000553290 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
ACTN1-207ENST00000553290 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
ACTN1-207ENST00000553290 SUSD4Q5VX71 490 aa16.84■□□□□ 0.29
ACTN1-207ENST00000553290 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
ACTN1-207ENST00000553290 AIMP1Q12904 312 aaKnown RBP16.83■□□□□ 0.28
ACTN1-207ENST00000553290 RIC1Q4ADV7 1423 aa16.83■□□□□ 0.28
ACTN1-207ENST00000553290 ERFEQ4G0M1 354 aa16.83■□□□□ 0.28
ACTN1-207ENST00000553290 HSP90AB3PQ58FF7 597 aa16.83■□□□□ 0.28
ACTN1-207ENST00000553290 DUSP27Q5VZP5 1158 aa16.83■□□□□ 0.28
ACTN1-207ENST00000553290 NUTM1Q86Y26 1132 aa16.83■□□□□ 0.28
ACTN1-207ENST00000553290 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
ACTN1-207ENST00000553290 MRS2Q9HD23 443 aa16.83■□□□□ 0.28
ACTN1-207ENST00000553290 LTBP3Q9NS15 1303 aa16.83■□□□□ 0.28
ACTN1-207ENST00000553290 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-207ENST00000553290 ABCC12Q96J65 1359 aa16.82■□□□□ 0.28
ACTN1-207ENST00000553290 NTSR2O95665 410 aa16.82■□□□□ 0.28
ACTN1-207ENST00000553290 PRELPP51888 382 aa16.82■□□□□ 0.28
ACTN1-207ENST00000553290 CRY2Q49AN0 593 aa16.82■□□□□ 0.28
ACTN1-207ENST00000553290 TAOK3Q9H2K8 898 aa16.82■□□□□ 0.28
ACTN1-207ENST00000553290 NMRK2Q9NPI5 230 aa16.82■□□□□ 0.28
ACTN1-207ENST00000553290 CHPF2Q9P2E5 772 aa16.82■□□□□ 0.28
ACTN1-207ENST00000553290 C7orf43Q8WVR3 580 aa16.81■□□□□ 0.28
ACTN1-207ENST00000553290 DICER1Q9UPY3 1922 aaKnown RBP16.8■□□□□ 0.28
ACTN1-207ENST00000553290 ANKRD36CQ5JPF3 1778 aa16.8■□□□□ 0.28
ACTN1-207ENST00000553290 RNF123Q5XPI4 1314 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms