RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 PI4KAP2A4QPH2 592 aa12.82□□□□□ -0.36
MMP19-209ENST00000552872 PHF14O94880 888 aa12.82□□□□□ -0.36
MMP19-209ENST00000552872 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
MMP19-209ENST00000552872 ITPRIPQ8IWB1 547 aa12.82□□□□□ -0.36
MMP19-209ENST00000552872 PI4KAP1Q8N8J0 262 aa12.82□□□□□ -0.36
MMP19-209ENST00000552872 ZBTB3Q9H5J0 574 aa12.82□□□□□ -0.36
MMP19-209ENST00000552872 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
MMP19-209ENST00000552872 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
MMP19-209ENST00000552872 LRP10Q7Z4F1 713 aa12.81□□□□□ -0.36
MMP19-209ENST00000552872 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
MMP19-209ENST00000552872 DDX21Q9NR30 783 aaKnown RBP eCLIP12.81□□□□□ -0.36
MMP19-209ENST00000552872 STARD3NLO95772 234 aa12.8□□□□□ -0.36
MMP19-209ENST00000552872 INTS5Q6P9B9 1019 aaKnown RBP12.8□□□□□ -0.36
MMP19-209ENST00000552872 C1orf115Q9H7X2 142 aa12.8□□□□□ -0.36
MMP19-209ENST00000552872 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
MMP19-209ENST00000552872 HOXB7P09629 217 aa12.8□□□□□ -0.36
MMP19-209ENST00000552872 MAP3K2Q9Y2U5 619 aa12.8□□□□□ -0.36
MMP19-209ENST00000552872 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
MMP19-209ENST00000552872 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.79□□□□□ -0.36
MMP19-209ENST00000552872 SMARCC1Q92922 1105 aaPredicted RBP12.79□□□□□ -0.36
MMP19-209ENST00000552872 ADCY9O60503 1353 aa12.79□□□□□ -0.36
MMP19-209ENST00000552872 EZH2Q15910 746 aaKnown RBP12.79□□□□□ -0.36
MMP19-209ENST00000552872 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
MMP19-209ENST00000552872 LY75O60449 1722 aa12.78□□□□□ -0.36
MMP19-209ENST00000552872 GNPATO15228 680 aa12.78□□□□□ -0.36
MMP19-209ENST00000552872 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
MMP19-209ENST00000552872 TNS1Q9HBL0 1735 aaKnown RBP12.78□□□□□ -0.36
MMP19-209ENST00000552872 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
MMP19-209ENST00000552872 ILDR2Q71H61 639 aa12.78□□□□□ -0.36
MMP19-209ENST00000552872 RIC3Q7Z5B4 369 aa12.78□□□□□ -0.36
MMP19-209ENST00000552872 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
MMP19-209ENST00000552872 CACNA1FO60840 1977 aa12.77□□□□□ -0.36
MMP19-209ENST00000552872 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.36
MMP19-209ENST00000552872 HLFQ16534 295 aa12.77□□□□□ -0.36
MMP19-209ENST00000552872 HYPKQ9NX55 129 aa12.77□□□□□ -0.36
MMP19-209ENST00000552872 COL5A3P25940 1745 aaPredicted RBP12.77□□□□□ -0.37
MMP19-209ENST00000552872 FAM177BA6PVY3 158 aa12.77□□□□□ -0.37
MMP19-209ENST00000552872 MYD88Q99836 296 aa12.76□□□□□ -0.37
MMP19-209ENST00000552872 GPTP24298 496 aa12.76□□□□□ -0.37
MMP19-209ENST00000552872 ANKRD13DQ6ZTN6 518 aa12.76□□□□□ -0.37
MMP19-209ENST00000552872 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
MMP19-209ENST00000552872 ABCC4O15439 1325 aa12.75□□□□□ -0.37
MMP19-209ENST00000552872 BRPF1P55201 1214 aaPredicted RBP12.75□□□□□ -0.37
MMP19-209ENST00000552872 MVPQ14764 893 aaKnown RBP12.75□□□□□ -0.37
MMP19-209ENST00000552872 ZNF827Q17R98 1081 aa12.75□□□□□ -0.37
MMP19-209ENST00000552872 MEIS3Q99687 375 aa12.75□□□□□ -0.37
MMP19-209ENST00000552872 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
MMP19-209ENST00000552872 TEX13AQ9BXU3 409 aaPredicted RBP12.74□□□□□ -0.37
MMP19-209ENST00000552872 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
MMP19-209ENST00000552872 PTPRCP08575 1304 aa12.74□□□□□ -0.37
MMP19-209ENST00000552872 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
MMP19-209ENST00000552872 SLC4A3P48751 1232 aa12.74□□□□□ -0.37
MMP19-209ENST00000552872 PDE3AQ14432 1141 aa12.74□□□□□ -0.37
MMP19-209ENST00000552872 KSR2Q6VAB6 950 aa12.74□□□□□ -0.37
MMP19-209ENST00000552872 BICDL1Q6ZP65 573 aa12.74□□□□□ -0.37
MMP19-209ENST00000552872 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
MMP19-209ENST00000552872 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
MMP19-209ENST00000552872 AK7Q96M32 723 aa12.73□□□□□ -0.37
MMP19-209ENST00000552872 SOS1Q07889 1333 aaPredicted RBP12.73□□□□□ -0.37
MMP19-209ENST00000552872 RRP9O43818 475 aaKnown RBP12.73□□□□□ -0.37
MMP19-209ENST00000552872 IGKV5-2P06315 115 aa12.73□□□□□ -0.37
MMP19-209ENST00000552872 SYNE4Q8N205 404 aa12.73□□□□□ -0.37
MMP19-209ENST00000552872 PDGFDQ9GZP0 370 aaPredicted RBP12.73□□□□□ -0.37
MMP19-209ENST00000552872 RRAGDQ9NQL2 400 aaPredicted RBP12.73□□□□□ -0.37
MMP19-209ENST00000552872 FRAT2O75474 233 aaPredicted RBP12.72□□□□□ -0.37
MMP19-209ENST00000552872 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
MMP19-209ENST00000552872 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
MMP19-209ENST00000552872 COL15A1P39059 1388 aa12.72□□□□□ -0.37
MMP19-209ENST00000552872 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
MMP19-209ENST00000552872 NBPF7P0C2Y1 421 aaPredicted RBP12.72□□□□□ -0.37
MMP19-209ENST00000552872 SF3B2Q13435 895 aaKnown RBP12.72□□□□□ -0.37
MMP19-209ENST00000552872 BEND3Q5T5X7 828 aa12.72□□□□□ -0.37
MMP19-209ENST00000552872 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
MMP19-209ENST00000552872 CCDC24Q8N4L8 307 aa12.72□□□□□ -0.37
MMP19-209ENST00000552872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.37
MMP19-209ENST00000552872 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
MMP19-209ENST00000552872 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
MMP19-209ENST00000552872 PCDHB15Q9Y5E8 787 aa12.71□□□□□ -0.37
MMP19-209ENST00000552872 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.37
MMP19-209ENST00000552872 DDX58O95786 925 aaKnown RBP12.71□□□□□ -0.38
MMP19-209ENST00000552872 IL6STP40189 918 aaPredicted RBP12.71□□□□□ -0.38
MMP19-209ENST00000552872 HSP90AA2PQ14568 343 aaPredicted RBP12.71□□□□□ -0.38
MMP19-209ENST00000552872 PLBD2Q8NHP8 589 aa12.71□□□□□ -0.38
MMP19-209ENST00000552872 CAMKK2Q96RR4 588 aa12.71□□□□□ -0.38
MMP19-209ENST00000552872 TFCP2L1Q9NZI6 479 aa12.71□□□□□ -0.38
MMP19-209ENST00000552872 NUP98P52948 1817 aa12.71□□□□□ -0.38
MMP19-209ENST00000552872 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
MMP19-209ENST00000552872 PLSCR1O15162 318 aa12.7□□□□□ -0.38
MMP19-209ENST00000552872 SRCIN1Q9C0H9 1055 aa12.7□□□□□ -0.38
MMP19-209ENST00000552872 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
MMP19-209ENST00000552872 INTS3Q68E01 1043 aaKnown RBP12.7□□□□□ -0.38
MMP19-209ENST00000552872 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
MMP19-209ENST00000552872 MAP3K15Q6ZN16 1313 aa12.69□□□□□ -0.38
MMP19-209ENST00000552872 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
MMP19-209ENST00000552872 MSL1Q68DK7 614 aa12.69□□□□□ -0.38
MMP19-209ENST00000552872 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
MMP19-209ENST00000552872 USP44Q9H0E7 712 aa12.69□□□□□ -0.38
MMP19-209ENST00000552872 UBR3Q6ZT12 1888 aa12.69□□□□□ -0.38
MMP19-209ENST00000552872 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
MMP19-209ENST00000552872 NEURL1BA8MQ27 555 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms