RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CNBD1Q8NA66 436 aa22.44■■□□□ 1.18
CHMP1A-208ENST00000550102 ARFGEF2Q9Y6D5 1785 aa22.44■■□□□ 1.18
CHMP1A-208ENST00000550102 ATP10DQ9P241 1426 aa22.43■■□□□ 1.18
CHMP1A-208ENST00000550102 MAP3K15Q6ZN16 1313 aa22.43■■□□□ 1.18
CHMP1A-208ENST00000550102 NPHP1O15259 732 aa22.43■■□□□ 1.18
CHMP1A-208ENST00000550102 HOXB7P09629 217 aa22.43■■□□□ 1.18
CHMP1A-208ENST00000550102 GNAI1P63096 354 aa22.43■■□□□ 1.18
CHMP1A-208ENST00000550102 KRT24Q2M2I5 525 aa22.43■■□□□ 1.18
CHMP1A-208ENST00000550102 MBIPQ9NS73 344 aa22.43■■□□□ 1.18
CHMP1A-208ENST00000550102 BCS1LQ9Y276 419 aa22.43■■□□□ 1.18
CHMP1A-208ENST00000550102 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
CHMP1A-208ENST00000550102 KCNA3P22001 575 aa22.42■■□□□ 1.18
CHMP1A-208ENST00000550102 CHRNA5P30532 468 aa22.42■■□□□ 1.18
CHMP1A-208ENST00000550102 PRR5LQ6MZQ0 368 aa22.42■■□□□ 1.18
CHMP1A-208ENST00000550102 PIM2Q9P1W9 311 aa22.42■■□□□ 1.18
CHMP1A-208ENST00000550102 ERVV-1B6SEH8 477 aa22.41■■□□□ 1.18
CHMP1A-208ENST00000550102 CCDC27Q2M243 656 aa22.41■■□□□ 1.18
CHMP1A-208ENST00000550102 NIP7Q9Y221 180 aaKnown RBP eCLIP22.41■■□□□ 1.18
CHMP1A-208ENST00000550102 ST5P78524 1137 aa22.4■■□□□ 1.18
CHMP1A-208ENST00000550102 TTLL7Q6ZT98 887 aa22.4■■□□□ 1.18
CHMP1A-208ENST00000550102 NBPF5PQ86XG9 351 aaPredicted RBP22.4■■□□□ 1.18
CHMP1A-208ENST00000550102 PDIA6Q15084 440 aa22.39■■□□□ 1.17
CHMP1A-208ENST00000550102 HLFQ16534 295 aa22.39■■□□□ 1.17
CHMP1A-208ENST00000550102 DALRD3Q5D0E6 543 aaKnown RBP22.39■■□□□ 1.17
CHMP1A-208ENST00000550102 HDGFL1Q5TGJ6 251 aa22.39■■□□□ 1.17
CHMP1A-208ENST00000550102 NECTIN2Q92692 538 aa22.39■■□□□ 1.17
CHMP1A-208ENST00000550102 BRIP1Q9BX63 1249 aa22.39■■□□□ 1.17
CHMP1A-208ENST00000550102 PROSER3Q2NL68 480 aa22.38■■□□□ 1.17
CHMP1A-208ENST00000550102 LRP10Q7Z4F1 713 aa22.38■■□□□ 1.17
CHMP1A-208ENST00000550102 C2CD5Q86YS7 1000 aa22.38■■□□□ 1.17
CHMP1A-208ENST00000550102 ZBTB3Q9H5J0 574 aa22.38■■□□□ 1.17
CHMP1A-208ENST00000550102 TNRC6CQ9HCJ0 1690 aaKnown RBP22.38■■□□□ 1.17
CHMP1A-208ENST00000550102 H0YIN7 160 aa22.37■■□□□ 1.17
CHMP1A-208ENST00000550102 ANXA1P04083 346 aa22.37■■□□□ 1.17
CHMP1A-208ENST00000550102 PDE6BP35913 854 aa22.37■■□□□ 1.17
CHMP1A-208ENST00000550102 NCBP3Q53F19 620 aaKnown RBP22.37■■□□□ 1.17
CHMP1A-208ENST00000550102 DUSP27Q5VZP5 1158 aa22.37■■□□□ 1.17
CHMP1A-208ENST00000550102 DDX21Q9NR30 783 aaKnown RBP eCLIP22.37■■□□□ 1.17
CHMP1A-208ENST00000550102 PDZRN3Q9UPQ7 1066 aa22.37■■□□□ 1.17
CHMP1A-208ENST00000550102 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
CHMP1A-208ENST00000550102 WWC1Q8IX03 1113 aa22.36■■□□□ 1.17
CHMP1A-208ENST00000550102 CCDC24Q8N4L8 307 aa22.36■■□□□ 1.17
CHMP1A-208ENST00000550102 ZNF784Q8NCA9 323 aaPredicted RBP22.36■■□□□ 1.17
CHMP1A-208ENST00000550102 CHPF2Q9P2E5 772 aa22.36■■□□□ 1.17
CHMP1A-208ENST00000550102 IBTKQ9P2D0 1353 aaPredicted RBP22.36■■□□□ 1.17
CHMP1A-208ENST00000550102 FAM9BQ8IZU0 186 aa22.35■■□□□ 1.17
CHMP1A-208ENST00000550102 SBF1O95248 1867 aa22.34■■□□□ 1.17
CHMP1A-208ENST00000550102 IL16Q14005 1332 aa22.34■■□□□ 1.17
CHMP1A-208ENST00000550102 TPTE2Q6XPS3 522 aa22.34■■□□□ 1.17
CHMP1A-208ENST00000550102 GIGYF2Q6Y7W6 1299 aaKnown RBP22.34■■□□□ 1.17
CHMP1A-208ENST00000550102 ADCY9O60503 1353 aa22.34■■□□□ 1.17
CHMP1A-208ENST00000550102 XAGE3Q8WTP9 111 aa22.33■■□□□ 1.17
CHMP1A-208ENST00000550102 NYXQ9GZU5 481 aa22.33■■□□□ 1.17
CHMP1A-208ENST00000550102 DBF4Q9UBU7 674 aaPredicted RBP22.33■■□□□ 1.17
CHMP1A-208ENST00000550102 FAM177BA6PVY3 158 aa22.32■■□□□ 1.16
CHMP1A-208ENST00000550102 GPTP24298 496 aa22.32■■□□□ 1.16
CHMP1A-208ENST00000550102 ARHGAP27Q6ZUM4 889 aa22.32■■□□□ 1.16
CHMP1A-208ENST00000550102 TTLL6Q8N841 843 aa22.32■■□□□ 1.16
CHMP1A-208ENST00000550102 UBN2Q6ZU65 1347 aa22.31■■□□□ 1.16
CHMP1A-208ENST00000550102 RIC1Q4ADV7 1423 aa22.31■■□□□ 1.16
CHMP1A-208ENST00000550102 SLX4Q8IY92 1834 aa22.31■■□□□ 1.16
CHMP1A-208ENST00000550102 COPS6Q7L5N1 327 aa22.31■■□□□ 1.16
CHMP1A-208ENST00000550102 TSR2Q969E8 191 aaKnown RBP22.31■■□□□ 1.16
CHMP1A-208ENST00000550102 FER1L6Q2WGJ9 1857 aa22.3■■□□□ 1.16
CHMP1A-208ENST00000550102 CCDC88AQ3V6T2 1871 aa22.3■■□□□ 1.16
CHMP1A-208ENST00000550102 ABCC12Q96J65 1359 aa22.3■■□□□ 1.16
CHMP1A-208ENST00000550102 GTF2E1P29083 439 aaPredicted RBP22.3■■□□□ 1.16
CHMP1A-208ENST00000550102 AIMP1Q12904 312 aaKnown RBP22.3■■□□□ 1.16
CHMP1A-208ENST00000550102 HYPKQ9NX55 129 aa22.3■■□□□ 1.16
CHMP1A-208ENST00000550102 CACNA1FO60840 1977 aa22.3■■□□□ 1.16
CHMP1A-208ENST00000550102 LAMB2P55268 1798 aa22.3■■□□□ 1.16
CHMP1A-208ENST00000550102 TIAM2Q8IVF5 1701 aa22.29■■□□□ 1.16
CHMP1A-208ENST00000550102 ZNF34Q8IZ26 560 aa22.29■■□□□ 1.16
CHMP1A-208ENST00000550102 ZNF622Q969S3 477 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHMP1A-208ENST00000550102 CHMP4AQ9BY43 222 aa22.29■■□□□ 1.16
CHMP1A-208ENST00000550102 ELL2O00472 640 aaPredicted RBP22.28■■□□□ 1.16
CHMP1A-208ENST00000550102 SRGNP10124 158 aa22.28■■□□□ 1.16
CHMP1A-208ENST00000550102 PARP10Q53GL7 1025 aa22.28■■□□□ 1.16
CHMP1A-208ENST00000550102 HSP90AB3PQ58FF7 597 aa22.28■■□□□ 1.16
CHMP1A-208ENST00000550102 STYK1Q6J9G0 422 aa22.28■■□□□ 1.16
CHMP1A-208ENST00000550102 C8orf58Q8NAV2 365 aa22.28■■□□□ 1.16
CHMP1A-208ENST00000550102 WDR63Q8IWG1 891 aa22.27■■□□□ 1.16
CHMP1A-208ENST00000550102 SALL2Q9Y467 1007 aaPredicted RBP22.27■■□□□ 1.16
CHMP1A-208ENST00000550102 PPP1R42Q7Z4L9 355 aa22.26■■□□□ 1.15
CHMP1A-208ENST00000550102 CNKSR1Q969H4 720 aa22.26■■□□□ 1.15
CHMP1A-208ENST00000550102 MASTLQ96GX5 879 aa22.26■■□□□ 1.15
CHMP1A-208ENST00000550102 FANCIQ9NVI1 1328 aa22.26■■□□□ 1.15
CHMP1A-208ENST00000550102 KLRG2A4D1S0 409 aaPredicted RBP22.25■■□□□ 1.15
CHMP1A-208ENST00000550102 NTSR2O95665 410 aa22.25■■□□□ 1.15
CHMP1A-208ENST00000550102 NPR1P16066 1061 aa22.25■■□□□ 1.15
CHMP1A-208ENST00000550102 CCDC30Q5VVM6 783 aa22.25■■□□□ 1.15
CHMP1A-208ENST00000550102 SUSD4Q5VX71 490 aa22.25■■□□□ 1.15
CHMP1A-208ENST00000550102 NUTM1Q86Y26 1132 aa22.25■■□□□ 1.15
CHMP1A-208ENST00000550102 PLBD2Q8NHP8 589 aa22.25■■□□□ 1.15
CHMP1A-208ENST00000550102 DICER1Q9UPY3 1922 aaKnown RBP22.25■■□□□ 1.15
CHMP1A-208ENST00000550102 RNF123Q5XPI4 1314 aa22.25■■□□□ 1.15
CHMP1A-208ENST00000550102 DDX60Q8IY21 1712 aaKnown RBP22.24■■□□□ 1.15
CHMP1A-208ENST00000550102 ERFEQ4G0M1 354 aa22.24■■□□□ 1.15
CHMP1A-208ENST00000550102 PRPF40BQ6NWY9 871 aaKnown RBP22.24■■□□□ 1.15
CHMP1A-208ENST00000550102 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms