RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 DGKZQ13574 1117 aa8.52□□□□□ -1.05
PRDM4-204ENST00000549416 LBRQ14739 615 aaKnown RBP8.52□□□□□ -1.05
PRDM4-204ENST00000549416 VWA5B2Q8N398 1253 aa8.52□□□□□ -1.05
PRDM4-204ENST00000549416 GTF3C2Q8WUA4 911 aaPredicted RBP8.52□□□□□ -1.05
PRDM4-204ENST00000549416 SUSD3Q96L08 255 aa8.52□□□□□ -1.05
PRDM4-204ENST00000549416 CDC14CA4D256 554 aa8.51□□□□□ -1.05
PRDM4-204ENST00000549416 TNFRSF10BO14763 440 aa8.51□□□□□ -1.05
PRDM4-204ENST00000549416 SERPINB4P48594 390 aa8.51□□□□□ -1.05
PRDM4-204ENST00000549416 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
PRDM4-204ENST00000549416 EFHC2Q5JST6 749 aa8.51□□□□□ -1.05
PRDM4-204ENST00000549416 FAM26DQ5JW98 314 aa8.51□□□□□ -1.05
PRDM4-204ENST00000549416 LRRC69Q6ZNQ3 347 aa8.51□□□□□ -1.05
PRDM4-204ENST00000549416 NLRP8Q86W28 1048 aa8.51□□□□□ -1.05
PRDM4-204ENST00000549416 GMCL1Q96IK5 515 aa8.51□□□□□ -1.05
PRDM4-204ENST00000549416 DNMT3AQ9Y6K1 912 aaPredicted RBP8.51□□□□□ -1.05
PRDM4-204ENST00000549416 NFX1Q12986 1120 aaKnown RBP8.5□□□□□ -1.05
PRDM4-204ENST00000549416 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
PRDM4-204ENST00000549416 GTPBP3Q969Y2 492 aaKnown RBP8.5□□□□□ -1.05
PRDM4-204ENST00000549416 ZNF775Q96BV0 537 aaPredicted RBP8.5□□□□□ -1.05
PRDM4-204ENST00000549416 ZCCHC2Q9C0B9 1178 aaKnown RBP8.5□□□□□ -1.05
PRDM4-204ENST00000549416 KCNA1Q09470 495 aa8.49□□□□□ -1.05
PRDM4-204ENST00000549416 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
PRDM4-204ENST00000549416 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
PRDM4-204ENST00000549416 SV2AQ7L0J3 742 aa8.49□□□□□ -1.05
PRDM4-204ENST00000549416 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
PRDM4-204ENST00000549416 HELQQ8TDG4 1101 aa8.49□□□□□ -1.05
PRDM4-204ENST00000549416 NDFIP2Q9NV92 336 aa8.49□□□□□ -1.05
PRDM4-204ENST00000549416 DMGDHQ9UI17 866 aaKnown RBP8.49□□□□□ -1.05
PRDM4-204ENST00000549416 HCN2Q9UL51 889 aa8.49□□□□□ -1.05
PRDM4-204ENST00000549416 GNEQ9Y223 722 aaKnown RBP8.49□□□□□ -1.05
PRDM4-204ENST00000549416 ERBB4Q15303 1308 aa8.49□□□□□ -1.05
PRDM4-204ENST00000549416 VSIG8P0DPA2 414 aa8.48□□□□□ -1.05
PRDM4-204ENST00000549416 SAMD5Q5TGI4 173 aa8.48□□□□□ -1.05
PRDM4-204ENST00000549416 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
PRDM4-204ENST00000549416 MTMR7Q9Y216 660 aa8.48□□□□□ -1.05
PRDM4-204ENST00000549416 GJA3Q9Y6H8 435 aa8.48□□□□□ -1.05
PRDM4-204ENST00000549416 TGFBR3LH3BV60 316 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 GPR25O00155 361 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 BNIP3LO60238 219 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 ABL1P00519 1130 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 ZNF211Q13398 564 aaPredicted RBP8.47□□□□□ -1.05
PRDM4-204ENST00000549416 HIF1AQ16665 826 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 ETFBKMTQ8IXQ9 262 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 CCER1Q8TC90 406 aaPredicted RBP8.47□□□□□ -1.05
PRDM4-204ENST00000549416 IFT43Q96FT9 208 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 NEUROD4Q9HD90 331 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 PCDHGC4Q9Y5F7 938 aa8.47□□□□□ -1.05
PRDM4-204ENST00000549416 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.06
PRDM4-204ENST00000549416 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
PRDM4-204ENST00000549416 IER5Q5VY09 327 aa8.46□□□□□ -1.06
PRDM4-204ENST00000549416 FIGNL1Q6PIW4 674 aa8.46□□□□□ -1.06
PRDM4-204ENST00000549416 BTLAQ7Z6A9 289 aa8.46□□□□□ -1.06
PRDM4-204ENST00000549416 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.06
PRDM4-204ENST00000549416 STIM2Q9P246 746 aa8.46□□□□□ -1.06
PRDM4-204ENST00000549416 IVNS1ABPQ9Y6Y0 642 aa8.46□□□□□ -1.06
PRDM4-204ENST00000549416 ZBTB39O15060 712 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 EFSO43281 561 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 MICAL2O94851 1124 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 FAM157BP0CG42 384 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 TNP2Q05952 138 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 TYRO3Q06418 890 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 ECM1Q16610 540 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 SLC16A10Q8TF71 515 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 ABHD17AQ96GS6 310 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 EGFL7Q9UHF1 273 aa8.45□□□□□ -1.06
PRDM4-204ENST00000549416 DCDC2BA2VCK2 349 aa8.44□□□□□ -1.06
PRDM4-204ENST00000549416 ICMTO60725 284 aa8.44□□□□□ -1.06
PRDM4-204ENST00000549416 NPR3P17342 541 aa8.44□□□□□ -1.06
PRDM4-204ENST00000549416 MPSTP25325 297 aa8.44□□□□□ -1.06
PRDM4-204ENST00000549416 FKBP4Q02790 459 aaKnown RBP eCLIP8.44□□□□□ -1.06
PRDM4-204ENST00000549416 TREML1Q86YW5 311 aa8.44□□□□□ -1.06
PRDM4-204ENST00000549416 CEP63Q96MT8 703 aa8.44□□□□□ -1.06
PRDM4-204ENST00000549416 OPLAHO14841 1288 aa8.43□□□□□ -1.06
PRDM4-204ENST00000549416 KHNYNO15037 678 aaKnown RBP8.43□□□□□ -1.06
PRDM4-204ENST00000549416 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
PRDM4-204ENST00000549416 GRNP28799 593 aaKnown RBP8.43□□□□□ -1.06
PRDM4-204ENST00000549416 IDH3AP50213 366 aa8.43□□□□□ -1.06
PRDM4-204ENST00000549416 SF3B2Q13435 895 aaKnown RBP8.43□□□□□ -1.06
PRDM4-204ENST00000549416 GAS6Q14393 721 aa8.43□□□□□ -1.06
PRDM4-204ENST00000549416 IRF7Q92985 503 aa8.43□□□□□ -1.06
PRDM4-204ENST00000549416 CFHR5Q9BXR6 569 aa8.43□□□□□ -1.06
PRDM4-204ENST00000549416 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
PRDM4-204ENST00000549416 SOWAHDA6NJG2 315 aa8.42□□□□□ -1.06
PRDM4-204ENST00000549416 H3BRB1 525 aa8.42□□□□□ -1.06
PRDM4-204ENST00000549416 WFS1O76024 890 aa8.42□□□□□ -1.06
PRDM4-204ENST00000549416 INPP5BP32019 993 aa8.42□□□□□ -1.06
PRDM4-204ENST00000549416 SFSWAPQ12872 951 aaKnown RBP8.42□□□□□ -1.06
PRDM4-204ENST00000549416 LCE2AQ5TA79 106 aaPredicted RBP8.42□□□□□ -1.06
PRDM4-204ENST00000549416 FOXR1Q6PIV2 292 aa8.42□□□□□ -1.06
PRDM4-204ENST00000549416 TUT1Q9H6E5 874 aaKnown RBP8.42□□□□□ -1.06
PRDM4-204ENST00000549416 BRD7Q9NPI1 651 aa8.42□□□□□ -1.06
PRDM4-204ENST00000549416 ATXN7L1Q9ULK2 861 aaPredicted RBP8.42□□□□□ -1.06
PRDM4-204ENST00000549416 PATL2C9JE40 543 aaKnown RBP8.41□□□□□ -1.06
PRDM4-204ENST00000549416 KRT76Q01546 638 aa8.41□□□□□ -1.06
PRDM4-204ENST00000549416 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
PRDM4-204ENST00000549416 RNFT1Q5M7Z0 435 aa8.41□□□□□ -1.06
PRDM4-204ENST00000549416 TREML4Q6UXN2 200 aa8.41□□□□□ -1.06
PRDM4-204ENST00000549416 ATCAYQ86WG3 371 aa8.41□□□□□ -1.06
PRDM4-204ENST00000549416 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms