RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 KIF6Q6ZMV9 814 aa20.7■□□□□ 0.9
DDX54-204ENST00000546898 PIM2Q9P1W9 311 aa20.7■□□□□ 0.9
DDX54-204ENST00000546898 WWC3Q9ULE0 1092 aa20.7■□□□□ 0.9
DDX54-204ENST00000546898 ANKRD36CQ5JPF3 1778 aa20.69■□□□□ 0.9
DDX54-204ENST00000546898 ERVV-1B6SEH8 477 aa20.69■□□□□ 0.9
DDX54-204ENST00000546898 EIF2S2P20042 333 aaKnown RBP20.69■□□□□ 0.9
DDX54-204ENST00000546898 PRR5LQ6MZQ0 368 aa20.69■□□□□ 0.9
DDX54-204ENST00000546898 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
DDX54-204ENST00000546898 BCS1LQ9Y276 419 aa20.69■□□□□ 0.9
DDX54-204ENST00000546898 MAP3K15Q6ZN16 1313 aa20.69■□□□□ 0.9
DDX54-204ENST00000546898 ATP10DQ9P241 1426 aa20.69■□□□□ 0.9
DDX54-204ENST00000546898 CNBD1Q8NA66 436 aa20.68■□□□□ 0.9
DDX54-204ENST00000546898 MBIPQ9NS73 344 aa20.68■□□□□ 0.9
DDX54-204ENST00000546898 ARFGEF2Q9Y6D5 1785 aa20.67■□□□□ 0.9
DDX54-204ENST00000546898 CHRNA5P30532 468 aa20.67■□□□□ 0.9
DDX54-204ENST00000546898 PDIA6Q15084 440 aa20.67■□□□□ 0.9
DDX54-204ENST00000546898 NGEFQ8N5V2 710 aa20.67■□□□□ 0.9
DDX54-204ENST00000546898 NIP7Q9Y221 180 aaKnown RBP eCLIP20.67■□□□□ 0.9
DDX54-204ENST00000546898 NPHP1O15259 732 aa20.66■□□□□ 0.9
DDX54-204ENST00000546898 PDE6BP35913 854 aa20.66■□□□□ 0.9
DDX54-204ENST00000546898 ST5P78524 1137 aa20.66■□□□□ 0.9
DDX54-204ENST00000546898 HLFQ16534 295 aa20.66■□□□□ 0.9
DDX54-204ENST00000546898 KRT24Q2M2I5 525 aa20.66■□□□□ 0.9
DDX54-204ENST00000546898 DALRD3Q5D0E6 543 aaKnown RBP20.66■□□□□ 0.9
DDX54-204ENST00000546898 TTLL7Q6ZT98 887 aa20.66■□□□□ 0.9
DDX54-204ENST00000546898 LRP10Q7Z4F1 713 aa20.66■□□□□ 0.9
DDX54-204ENST00000546898 BRIP1Q9BX63 1249 aa20.66■□□□□ 0.9
DDX54-204ENST00000546898 NBPF5PQ86XG9 351 aaPredicted RBP20.65■□□□□ 0.9
DDX54-204ENST00000546898 CACNA1SQ13698 1873 aa20.64■□□□□ 0.9
DDX54-204ENST00000546898 IBTKQ9P2D0 1353 aaPredicted RBP20.64■□□□□ 0.89
DDX54-204ENST00000546898 H0YIN7 160 aa20.64■□□□□ 0.89
DDX54-204ENST00000546898 HDGFL1Q5TGJ6 251 aa20.64■□□□□ 0.89
DDX54-204ENST00000546898 C2CD5Q86YS7 1000 aa20.64■□□□□ 0.89
DDX54-204ENST00000546898 ZNF784Q8NCA9 323 aaPredicted RBP20.64■□□□□ 0.89
DDX54-204ENST00000546898 DDX21Q9NR30 783 aaKnown RBP eCLIP20.64■□□□□ 0.89
DDX54-204ENST00000546898 PROSER3Q2NL68 480 aa20.63■□□□□ 0.89
DDX54-204ENST00000546898 DUSP27Q5VZP5 1158 aa20.63■□□□□ 0.89
DDX54-204ENST00000546898 WWC1Q8IX03 1113 aa20.63■□□□□ 0.89
DDX54-204ENST00000546898 ZBTB3Q9H5J0 574 aa20.63■□□□□ 0.89
DDX54-204ENST00000546898 IL16Q14005 1332 aa20.62■□□□□ 0.89
DDX54-204ENST00000546898 TPTE2Q6XPS3 522 aa20.62■□□□□ 0.89
DDX54-204ENST00000546898 GIGYF2Q6Y7W6 1299 aaKnown RBP20.62■□□□□ 0.89
DDX54-204ENST00000546898 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
DDX54-204ENST00000546898 ADCY9O60503 1353 aa20.61■□□□□ 0.89
DDX54-204ENST00000546898 ANXA1P04083 346 aa20.61■□□□□ 0.89
DDX54-204ENST00000546898 NYXQ9GZU5 481 aa20.61■□□□□ 0.89
DDX54-204ENST00000546898 CHPF2Q9P2E5 772 aa20.61■□□□□ 0.89
DDX54-204ENST00000546898 DBF4Q9UBU7 674 aaPredicted RBP20.61■□□□□ 0.89
DDX54-204ENST00000546898 FAM9BQ8IZU0 186 aa20.6■□□□□ 0.89
DDX54-204ENST00000546898 TTLL6Q8N841 843 aa20.6■□□□□ 0.89
DDX54-204ENST00000546898 CHMP4AQ9BY43 222 aa20.6■□□□□ 0.89
DDX54-204ENST00000546898 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
DDX54-204ENST00000546898 SBF1O95248 1867 aa20.6■□□□□ 0.89
DDX54-204ENST00000546898 RIC1Q4ADV7 1423 aa20.6■□□□□ 0.89
DDX54-204ENST00000546898 COPS6Q7L5N1 327 aa20.59■□□□□ 0.89
DDX54-204ENST00000546898 CCDC24Q8N4L8 307 aa20.59■□□□□ 0.89
DDX54-204ENST00000546898 XAGE3Q8WTP9 111 aa20.59■□□□□ 0.89
DDX54-204ENST00000546898 PARP10Q53GL7 1025 aa20.58■□□□□ 0.89
DDX54-204ENST00000546898 HSP90AB3PQ58FF7 597 aa20.58■□□□□ 0.89
DDX54-204ENST00000546898 ARHGAP27Q6ZUM4 889 aa20.58■□□□□ 0.89
DDX54-204ENST00000546898 ZNF34Q8IZ26 560 aa20.58■□□□□ 0.89
DDX54-204ENST00000546898 UBN2Q6ZU65 1347 aa20.57■□□□□ 0.88
DDX54-204ENST00000546898 GTF2E1P29083 439 aaPredicted RBP20.57■□□□□ 0.88
DDX54-204ENST00000546898 STYK1Q6J9G0 422 aa20.57■□□□□ 0.88
DDX54-204ENST00000546898 HYPKQ9NX55 129 aa20.57■□□□□ 0.88
DDX54-204ENST00000546898 FER1L6Q2WGJ9 1857 aa20.56■□□□□ 0.88
DDX54-204ENST00000546898 CACNA1FO60840 1977 aa20.56■□□□□ 0.88
DDX54-204ENST00000546898 SLX4Q8IY92 1834 aa20.56■□□□□ 0.88
DDX54-204ENST00000546898 KLRG2A4D1S0 409 aaPredicted RBP20.56■□□□□ 0.88
DDX54-204ENST00000546898 FAM177BA6PVY3 158 aa20.56■□□□□ 0.88
DDX54-204ENST00000546898 SRGNP10124 158 aa20.56■□□□□ 0.88
DDX54-204ENST00000546898 GPTP24298 496 aa20.56■□□□□ 0.88
DDX54-204ENST00000546898 AIMP1Q12904 312 aaKnown RBP20.56■□□□□ 0.88
DDX54-204ENST00000546898 WDR63Q8IWG1 891 aa20.56■□□□□ 0.88
DDX54-204ENST00000546898 ZNF622Q969S3 477 aaKnown RBP eCLIP20.56■□□□□ 0.882e-6■■□□□ 14
DDX54-204ENST00000546898 MASTLQ96GX5 879 aa20.56■□□□□ 0.88
DDX54-204ENST00000546898 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
DDX54-204ENST00000546898 PPP1R42Q7Z4L9 355 aa20.55■□□□□ 0.88
DDX54-204ENST00000546898 C8orf58Q8NAV2 365 aa20.55■□□□□ 0.88
DDX54-204ENST00000546898 TSR2Q969E8 191 aaKnown RBP20.55■□□□□ 0.88
DDX54-204ENST00000546898 CNKSR1Q969H4 720 aa20.55■□□□□ 0.88
DDX54-204ENST00000546898 CCDC88AQ3V6T2 1871 aa20.55■□□□□ 0.88
DDX54-204ENST00000546898 RNF123Q5XPI4 1314 aa20.54■□□□□ 0.88
DDX54-204ENST00000546898 ABCC12Q96J65 1359 aa20.54■□□□□ 0.88
DDX54-204ENST00000546898 ELL2O00472 640 aaPredicted RBP20.53■□□□□ 0.88
DDX54-204ENST00000546898 NTSR2O95665 410 aa20.53■□□□□ 0.88
DDX54-204ENST00000546898 NPR1P16066 1061 aa20.53■□□□□ 0.88
DDX54-204ENST00000546898 SUSD4Q5VX71 490 aa20.53■□□□□ 0.88
DDX54-204ENST00000546898 PLBD2Q8NHP8 589 aa20.53■□□□□ 0.88
DDX54-204ENST00000546898 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
DDX54-204ENST00000546898 NUTM1Q86Y26 1132 aa20.52■□□□□ 0.88
DDX54-204ENST00000546898 LAMB2P55268 1798 aa20.51■□□□□ 0.87
DDX54-204ENST00000546898 DICER1Q9UPY3 1922 aaKnown RBP20.51■□□□□ 0.87
DDX54-204ENST00000546898 CCER2I3L3R5 266 aa20.51■□□□□ 0.87
DDX54-204ENST00000546898 TCIRG1Q13488 830 aa20.51■□□□□ 0.87
DDX54-204ENST00000546898 ERFEQ4G0M1 354 aa20.51■□□□□ 0.87
DDX54-204ENST00000546898 ANKRD13DQ6ZTN6 518 aa20.51■□□□□ 0.87
DDX54-204ENST00000546898 SALL2Q9Y467 1007 aaPredicted RBP20.51■□□□□ 0.87
DDX54-204ENST00000546898 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
DDX54-204ENST00000546898 TIAM2Q8IVF5 1701 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms