RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 FMNL1O95466 1100 aaPredicted RBP9.99□□□□□ -0.81
CCDC60-205ENST00000546345 CLK2P49760 499 aaKnown RBP9.99□□□□□ -0.81
CCDC60-205ENST00000546345 STRN4Q9NRL3 753 aa9.99□□□□□ -0.81
CCDC60-205ENST00000546345 LIMD1Q9UGP4 676 aa9.99□□□□□ -0.81
CCDC60-205ENST00000546345 PCDHGC3Q9UN70 934 aa9.99□□□□□ -0.81
CCDC60-205ENST00000546345 SALL2Q9Y467 1007 aaPredicted RBP9.99□□□□□ -0.81
CCDC60-205ENST00000546345 DHX57Q6P158 1386 aaKnown RBP9.99□□□□□ -0.81
CCDC60-205ENST00000546345 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
CCDC60-205ENST00000546345 PCDHB15Q9Y5E8 787 aa9.98□□□□□ -0.81
CCDC60-205ENST00000546345 ANKRD30BQ9BXX2 1392 aa9.98□□□□□ -0.81
CCDC60-205ENST00000546345 TRPM1Q7Z4N2 1603 aa9.97□□□□□ -0.81
CCDC60-205ENST00000546345 PLSCR1O15162 318 aa9.97□□□□□ -0.81
CCDC60-205ENST00000546345 TUSC1Q2TAM9 212 aa9.97□□□□□ -0.81
CCDC60-205ENST00000546345 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
CCDC60-205ENST00000546345 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
CCDC60-205ENST00000546345 PCMTD1Q96MG8 357 aaPredicted RBP9.97□□□□□ -0.81
CCDC60-205ENST00000546345 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
CCDC60-205ENST00000546345 C6orf229H3BNL8 230 aa9.96□□□□□ -0.82
CCDC60-205ENST00000546345 PDE3BQ13370 1112 aa9.96□□□□□ -0.82
CCDC60-205ENST00000546345 CSPP1Q1MSJ5 1256 aa9.96□□□□□ -0.82
CCDC60-205ENST00000546345 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
CCDC60-205ENST00000546345 THAP11Q96EK4 314 aa9.96□□□□□ -0.82
CCDC60-205ENST00000546345 SPSB2Q99619 263 aa9.96□□□□□ -0.82
CCDC60-205ENST00000546345 GPRASP1Q5JY77 1395 aa9.96□□□□□ -0.82
CCDC60-205ENST00000546345 AATKQ6ZMQ8 1374 aa9.96□□□□□ -0.82
CCDC60-205ENST00000546345 BCL9O00512 1426 aa9.96□□□□□ -0.82
CCDC60-205ENST00000546345 WDR90Q96KV7 1748 aa9.96□□□□□ -0.82
CCDC60-205ENST00000546345 SAFB2Q14151 953 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC60-205ENST00000546345 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
CCDC60-205ENST00000546345 RNF19BQ6ZMZ0 732 aa9.95□□□□□ -0.82
CCDC60-205ENST00000546345 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
CCDC60-205ENST00000546345 NKX2-3Q8TAU0 364 aa9.95□□□□□ -0.82
CCDC60-205ENST00000546345 SYMPKQ92797 1274 aaKnown RBP9.95□□□□□ -0.82
CCDC60-205ENST00000546345 CPDO75976 1380 aa9.95□□□□□ -0.82
CCDC60-205ENST00000546345 PIK3C2AO00443 1686 aa9.95□□□□□ -0.82
CCDC60-205ENST00000546345 SLIT3O75094 1523 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 CRB1P82279 1406 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 ATP10DQ9P241 1426 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 TLL1O43897 1013 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 ADH1BP00325 375 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 ITGAEP38570 1179 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 MTMR2Q13614 643 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 PRPF38BQ5VTL8 546 aaKnown RBP9.94□□□□□ -0.82
CCDC60-205ENST00000546345 TCP11L2Q8N4U5 519 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 PRAM1Q96QH2 718 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 MTFR1LQ9H019 292 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 ZBTB3Q9H5J0 574 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 KAT6BQ8WYB5 2073 aa9.94□□□□□ -0.82
CCDC60-205ENST00000546345 LY75O60449 1722 aa9.93□□□□□ -0.82
CCDC60-205ENST00000546345 QRICH2Q9H0J4 1663 aa9.93□□□□□ -0.82
CCDC60-205ENST00000546345 ADCY9O60503 1353 aa9.93□□□□□ -0.82
CCDC60-205ENST00000546345 SPDYE5A6NIY4 337 aa9.93□□□□□ -0.82
CCDC60-205ENST00000546345 ZC3H6P61129 1189 aaKnown RBP9.93□□□□□ -0.82
CCDC60-205ENST00000546345 USB1Q9BQ65 265 aaKnown RBP9.93□□□□□ -0.82
CCDC60-205ENST00000546345 USP19O94966 1318 aa9.92□□□□□ -0.82
CCDC60-205ENST00000546345 LILRB3O75022 631 aa9.92□□□□□ -0.82
CCDC60-205ENST00000546345 RETREG3Q86VR2 466 aa9.92□□□□□ -0.82
CCDC60-205ENST00000546345 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC60-205ENST00000546345 ABCC6O95255 1503 aa9.92□□□□□ -0.82
CCDC60-205ENST00000546345 EIF3AQ14152 1382 aaKnown RBP9.91□□□□□ -0.82
CCDC60-205ENST00000546345 SLC15A2Q16348 729 aa9.91□□□□□ -0.82
CCDC60-205ENST00000546345 C14orf93Q9H972 538 aaKnown RBP9.91□□□□□ -0.82
CCDC60-205ENST00000546345 POLR3AO14802 1390 aaPredicted RBP9.9□□□□□ -0.82
CCDC60-205ENST00000546345 QPCTQ16769 361 aa9.9□□□□□ -0.82
CCDC60-205ENST00000546345 FAM160A2Q8N612 972 aaPredicted RBP9.9□□□□□ -0.82
CCDC60-205ENST00000546345 ARXQ96QS3 562 aa9.9□□□□□ -0.82
CCDC60-205ENST00000546345 HIRIP3Q9BW71 556 aaPredicted RBP9.9□□□□□ -0.82
CCDC60-205ENST00000546345 SLC6A16Q9GZN6 736 aa9.9□□□□□ -0.82
CCDC60-205ENST00000546345 THRAP3Q9Y2W1 955 aaKnown RBP9.9□□□□□ -0.82
CCDC60-205ENST00000546345 HSPA6P17066 643 aa9.89□□□□□ -0.83
CCDC60-205ENST00000546345 TXNRD1Q16881 649 aa9.89□□□□□ -0.83
CCDC60-205ENST00000546345 RGL3Q3MIN7 710 aa9.89□□□□□ -0.83
CCDC60-205ENST00000546345 MSS51Q4VC12 460 aa9.89□□□□□ -0.83
CCDC60-205ENST00000546345 CFAP70Q5T0N1 1121 aa9.89□□□□□ -0.83
CCDC60-205ENST00000546345 DOT1LQ8TEK3 1739 aa9.89□□□□□ -0.83
CCDC60-205ENST00000546345 TNS2Q63HR2 1409 aa9.89□□□□□ -0.83
CCDC60-205ENST00000546345 YBX3P16989 372 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCDC60-205ENST00000546345 GGCXP38435 758 aa9.88□□□□□ -0.83
CCDC60-205ENST00000546345 NUTM2GQ5VZR2 741 aa9.88□□□□□ -0.83
CCDC60-205ENST00000546345 MARCH10Q8NA82 808 aaPredicted RBP9.88□□□□□ -0.83
CCDC60-205ENST00000546345 PRR7Q8TB68 274 aa9.88□□□□□ -0.83
CCDC60-205ENST00000546345 STK32BQ9NY57 414 aa9.88□□□□□ -0.83
CCDC60-205ENST00000546345 TAF1LQ8IZX4 1826 aa9.88□□□□□ -0.83
CCDC60-205ENST00000546345 CICQ96RK0 1608 aaPredicted RBP9.88□□□□□ -0.83
CCDC60-205ENST00000546345 USP54Q70EL1 1684 aa9.87□□□□□ -0.83
CCDC60-205ENST00000546345 C11orf95C9JLR9 678 aaPredicted RBP9.87□□□□□ -0.83
CCDC60-205ENST00000546345 GPR162Q16538 588 aa9.87□□□□□ -0.83
CCDC60-205ENST00000546345 ZNF827Q17R98 1081 aa9.87□□□□□ -0.83
CCDC60-205ENST00000546345 RTL5Q5HYW3 569 aaPredicted RBP9.87□□□□□ -0.83
CCDC60-205ENST00000546345 PPP2R2DQ66LE6 453 aa9.87□□□□□ -0.83
CCDC60-205ENST00000546345 NLGN2Q8NFZ4 835 aa9.87□□□□□ -0.83
CCDC60-205ENST00000546345 LTN1O94822 1766 aa9.87□□□□□ -0.83
CCDC60-205ENST00000546345 KIAA1551Q9HCM1 1747 aa9.87□□□□□ -0.83
CCDC60-205ENST00000546345 S1PR4O95977 384 aa9.86□□□□□ -0.83
CCDC60-205ENST00000546345 TOGARAM1Q9Y4F4 1720 aa9.86□□□□□ -0.83
CCDC60-205ENST00000546345 WASLO00401 505 aaPredicted RBP9.85□□□□□ -0.83
CCDC60-205ENST00000546345 EVA1CP58658 441 aa9.85□□□□□ -0.83
CCDC60-205ENST00000546345 PPP1R18Q6NYC8 613 aa9.85□□□□□ -0.83
CCDC60-205ENST00000546345 NGDNQ8NEJ9 315 aaKnown RBP9.85□□□□□ -0.83
CCDC60-205ENST00000546345 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms