RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
YBX3-217ENST00000546164 BICDL1Q6ZP65 573 aa15.45■□□□□ 0.06
YBX3-217ENST00000546164 WWC1Q8IX03 1113 aa15.45■□□□□ 0.06
YBX3-217ENST00000546164 PELP1Q8IZL8 1130 aaKnown RBP15.45■□□□□ 0.06
YBX3-217ENST00000546164 SETDB2Q96T68 719 aa15.45■□□□□ 0.06
YBX3-217ENST00000546164 A0A0G2JLW4 131 aa15.44■□□□□ 0.06
YBX3-217ENST00000546164 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
YBX3-217ENST00000546164 KCNA3P22001 575 aa15.44■□□□□ 0.06
YBX3-217ENST00000546164 IL16Q14005 1332 aa15.43■□□□□ 0.06
YBX3-217ENST00000546164 MAP3K15Q6ZN16 1313 aa15.43■□□□□ 0.06
YBX3-217ENST00000546164 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
YBX3-217ENST00000546164 MYL6BP14649 208 aa15.43■□□□□ 0.06
YBX3-217ENST00000546164 PRR5LQ6MZQ0 368 aa15.43■□□□□ 0.06
YBX3-217ENST00000546164 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
YBX3-217ENST00000546164 NGEFQ8N5V2 710 aa15.43■□□□□ 0.06
YBX3-217ENST00000546164 HLFQ16534 295 aa15.42■□□□□ 0.06
YBX3-217ENST00000546164 PROSER3Q2NL68 480 aa15.42■□□□□ 0.06
YBX3-217ENST00000546164 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
YBX3-217ENST00000546164 KIF6Q6ZMV9 814 aa15.42■□□□□ 0.06
YBX3-217ENST00000546164 FAM9BQ8IZU0 186 aa15.42■□□□□ 0.06
YBX3-217ENST00000546164 DDX21Q9NR30 783 aaKnown RBP eCLIP15.42■□□□□ 0.06
YBX3-217ENST00000546164 ATP10DQ9P241 1426 aa15.42■□□□□ 0.06
YBX3-217ENST00000546164 YY1P25490 414 aa15.41■□□□□ 0.06
YBX3-217ENST00000546164 HDGFL1Q5TGJ6 251 aa15.41■□□□□ 0.06
YBX3-217ENST00000546164 CNBD1Q8NA66 436 aa15.41■□□□□ 0.06
YBX3-217ENST00000546164 BRIP1Q9BX63 1249 aa15.41■□□□□ 0.06
YBX3-217ENST00000546164 PIM2Q9P1W9 311 aa15.41■□□□□ 0.06
YBX3-217ENST00000546164 PDZRN3Q9UPQ7 1066 aa15.41■□□□□ 0.06
YBX3-217ENST00000546164 NIP7Q9Y221 180 aaKnown RBP eCLIP15.41■□□□□ 0.06
YBX3-217ENST00000546164 N4BP2Q86UW6 1770 aaPredicted RBP15.4■□□□□ 0.06
YBX3-217ENST00000546164 CCER2I3L3R5 266 aa15.4■□□□□ 0.06
YBX3-217ENST00000546164 CHRNA5P30532 468 aa15.4■□□□□ 0.06
YBX3-217ENST00000546164 WDR63Q8IWG1 891 aa15.4■□□□□ 0.06
YBX3-217ENST00000546164 DBF4Q9UBU7 674 aaPredicted RBP15.4■□□□□ 0.06
YBX3-217ENST00000546164 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
YBX3-217ENST00000546164 ANXA1P04083 346 aa15.39■□□□□ 0.05
YBX3-217ENST00000546164 KCNA4P22459 653 aa15.39■□□□□ 0.05
YBX3-217ENST00000546164 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
YBX3-217ENST00000546164 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.05
YBX3-217ENST00000546164 NECTIN2Q92692 538 aa15.39■□□□□ 0.05
YBX3-217ENST00000546164 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
YBX3-217ENST00000546164 CHPF2Q9P2E5 772 aa15.39■□□□□ 0.05
YBX3-217ENST00000546164 BCS1LQ9Y276 419 aa15.39■□□□□ 0.05
YBX3-217ENST00000546164 IBTKQ9P2D0 1353 aaPredicted RBP15.38■□□□□ 0.05
YBX3-217ENST00000546164 PDE6BP35913 854 aa15.38■□□□□ 0.05
YBX3-217ENST00000546164 ST5P78524 1137 aa15.38■□□□□ 0.05
YBX3-217ENST00000546164 DALRD3Q5D0E6 543 aaKnown RBP15.38■□□□□ 0.05
YBX3-217ENST00000546164 TPTE2Q6XPS3 522 aa15.38■□□□□ 0.05
YBX3-217ENST00000546164 COPS6Q7L5N1 327 aa15.38■□□□□ 0.05
YBX3-217ENST00000546164 C8orf58Q8NAV2 365 aa15.38■□□□□ 0.05
YBX3-217ENST00000546164 ZBTB3Q9H5J0 574 aa15.38■□□□□ 0.05
YBX3-217ENST00000546164 WWC3Q9ULE0 1092 aa15.38■□□□□ 0.05
YBX3-217ENST00000546164 CHD4Q14839 1912 aa15.38■□□□□ 0.05
YBX3-217ENST00000546164 SENP3-EIF4A1A0A087X0R7 540 aa15.37■□□□□ 0.05
YBX3-217ENST00000546164 H0YIN7 160 aa15.37■□□□□ 0.05
YBX3-217ENST00000546164 C2CD5Q86YS7 1000 aa15.37■□□□□ 0.05
YBX3-217ENST00000546164 ZNF34Q8IZ26 560 aa15.37■□□□□ 0.05
YBX3-217ENST00000546164 XAGE3Q8WTP9 111 aa15.37■□□□□ 0.05
YBX3-217ENST00000546164 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
YBX3-217ENST00000546164 KLRG2A4D1S0 409 aaPredicted RBP15.36■□□□□ 0.05
YBX3-217ENST00000546164 NPHP1O15259 732 aa15.36■□□□□ 0.05
YBX3-217ENST00000546164 TSR2Q969E8 191 aaKnown RBP15.36■□□□□ 0.05
YBX3-217ENST00000546164 UBN2Q6ZU65 1347 aa15.36■□□□□ 0.05
YBX3-217ENST00000546164 ANKRD31Q8N7Z5 1873 aa15.35■□□□□ 0.05
YBX3-217ENST00000546164 ELL2O00472 640 aaPredicted RBP15.35■□□□□ 0.05
YBX3-217ENST00000546164 PARP10Q53GL7 1025 aa15.35■□□□□ 0.05
YBX3-217ENST00000546164 HSP90AB3PQ58FF7 597 aa15.35■□□□□ 0.05
YBX3-217ENST00000546164 CCDC24Q8N4L8 307 aa15.35■□□□□ 0.05
YBX3-217ENST00000546164 NYXQ9GZU5 481 aa15.35■□□□□ 0.05
YBX3-217ENST00000546164 NUP98P52948 1817 aa15.35■□□□□ 0.05
YBX3-217ENST00000546164 RIC1Q4ADV7 1423 aa15.34■□□□□ 0.05
YBX3-217ENST00000546164 DLEC1Q9Y238 1755 aa15.34■□□□□ 0.05
YBX3-217ENST00000546164 AIMP1Q12904 312 aaKnown RBP15.34■□□□□ 0.05
YBX3-217ENST00000546164 TSPYL6Q8N831 410 aa15.34■□□□□ 0.05
YBX3-217ENST00000546164 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
YBX3-217ENST00000546164 PLBD2Q8NHP8 589 aa15.34■□□□□ 0.05
YBX3-217ENST00000546164 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
YBX3-217ENST00000546164 ZNF521Q96K83 1311 aa15.34■□□□□ 0.05
YBX3-217ENST00000546164 FANCIQ9NVI1 1328 aa15.34■□□□□ 0.05
YBX3-217ENST00000546164 ARFGEF1Q9Y6D6 1849 aa15.33■□□□□ 0.05
YBX3-217ENST00000546164 SRGNP10124 158 aa15.33■□□□□ 0.04
YBX3-217ENST00000546164 GPTP24298 496 aa15.33■□□□□ 0.04
YBX3-217ENST00000546164 CCDC30Q5VVM6 783 aa15.33■□□□□ 0.04
YBX3-217ENST00000546164 SUSD4Q5VX71 490 aa15.33■□□□□ 0.04
YBX3-217ENST00000546164 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
YBX3-217ENST00000546164 NTSR2O95665 410 aa15.32■□□□□ 0.04
YBX3-217ENST00000546164 TCIRG1Q13488 830 aa15.32■□□□□ 0.04
YBX3-217ENST00000546164 TWISTNBQ3B726 338 aaPredicted RBP15.32■□□□□ 0.04
YBX3-217ENST00000546164 STYK1Q6J9G0 422 aa15.32■□□□□ 0.04
YBX3-217ENST00000546164 ANKRD13DQ6ZTN6 518 aa15.32■□□□□ 0.04
YBX3-217ENST00000546164 COL11A2P13942 1736 aaPredicted RBP15.31■□□□□ 0.04
YBX3-217ENST00000546164 FAM177BA6PVY3 158 aa15.31■□□□□ 0.04
YBX3-217ENST00000546164 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
YBX3-217ENST00000546164 DIEXFQ68CQ4 756 aaKnown RBP15.31■□□□□ 0.04
YBX3-217ENST00000546164 ARHGAP27Q6ZUM4 889 aa15.31■□□□□ 0.04
YBX3-217ENST00000546164 PPP1R42Q7Z4L9 355 aa15.31■□□□□ 0.04
YBX3-217ENST00000546164 MASTLQ96GX5 879 aa15.31■□□□□ 0.04
YBX3-217ENST00000546164 MYH16Q9H6N6 1097 aa15.31■□□□□ 0.04
YBX3-217ENST00000546164 ADCY9O60503 1353 aa15.31■□□□□ 0.04
YBX3-217ENST00000546164 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms