RNA–Protein interactions for RNA: ENST00000545484.1

CCND1-206, Transcript of cyclin D1, humanhuman

TSL 5

Gene CCND1, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-206ENST00000545484 NUP98P52948 1817 aa28.13■■■□□ 2.09
CCND1-206ENST00000545484 H0YIN7 160 aa28.12■■■□□ 2.09
CCND1-206ENST00000545484 APAF1O14727 1248 aa28.12■■■□□ 2.09
CCND1-206ENST00000545484 RGL2O15211 777 aa28.12■■■□□ 2.09
CCND1-206ENST00000545484 BRIP1Q9BX63 1249 aa28.12■■■□□ 2.09
CCND1-206ENST00000545484 NIP7Q9Y221 180 aaKnown RBP eCLIP28.12■■■□□ 2.09
CCND1-206ENST00000545484 ERBB4Q15303 1308 aa28.12■■■□□ 2.09
CCND1-206ENST00000545484 CHL1O00533 1208 aa28.11■■■□□ 2.09
CCND1-206ENST00000545484 ANP32CO43423 234 aa28.11■■■□□ 2.09
CCND1-206ENST00000545484 EIF2S2P20042 333 aaKnown RBP28.11■■■□□ 2.09
CCND1-206ENST00000545484 ST5P78524 1137 aa28.11■■■□□ 2.09
CCND1-206ENST00000545484 HLFQ16534 295 aa28.11■■■□□ 2.09
CCND1-206ENST00000545484 NBPF5PQ86XG9 351 aaPredicted RBP28.11■■■□□ 2.09
CCND1-206ENST00000545484 PDE6BP35913 854 aa28.1■■■□□ 2.09
CCND1-206ENST00000545484 KIF6Q6ZMV9 814 aa28.1■■■□□ 2.09
CCND1-206ENST00000545484 MAP3K15Q6ZN16 1313 aa28.09■■■□□ 2.09
CCND1-206ENST00000545484 CACNA1SQ13698 1873 aa28.08■■■□□ 2.09
CCND1-206ENST00000545484 KRT24Q2M2I5 525 aa28.08■■■□□ 2.09
CCND1-206ENST00000545484 TTLL7Q6ZT98 887 aa28.08■■■□□ 2.09
CCND1-206ENST00000545484 TTLL6Q8N841 843 aa28.08■■■□□ 2.09
CCND1-206ENST00000545484 ERVV-1B6SEH8 477 aa28.07■■■□□ 2.08
CCND1-206ENST00000545484 ZNF526Q8TF50 670 aaPredicted RBP28.07■■■□□ 2.08
CCND1-206ENST00000545484 ZBTB3Q9H5J0 574 aa28.07■■■□□ 2.08
CCND1-206ENST00000545484 FAM177BA6PVY3 158 aa28.06■■■□□ 2.08
CCND1-206ENST00000545484 NECTIN2Q92692 538 aa28.06■■■□□ 2.08
CCND1-206ENST00000545484 ZNF622Q969S3 477 aaKnown RBP eCLIP28.06■■■□□ 2.08
CCND1-206ENST00000545484 PDZRN3Q9UPQ7 1066 aa28.06■■■□□ 2.08
CCND1-206ENST00000545484 CFAP44Q96MT7 982 aa28.05■■■□□ 2.08
CCND1-206ENST00000545484 MRS2Q9HD23 443 aa28.05■■■□□ 2.08
CCND1-206ENST00000545484 ANXA1P04083 346 aa28.04■■■□□ 2.08
CCND1-206ENST00000545484 PDIA6Q15084 440 aa28.04■■■□□ 2.08
CCND1-206ENST00000545484 PROSER3Q2NL68 480 aa28.04■■■□□ 2.08
CCND1-206ENST00000545484 TPTE2Q6XPS3 522 aa28.04■■■□□ 2.08
CCND1-206ENST00000545484 GPBP1L1Q9HC44 474 aaPredicted RBP28.04■■■□□ 2.08
CCND1-206ENST00000545484 SBF1O95248 1867 aa28.04■■■□□ 2.08
CCND1-206ENST00000545484 MBIPQ9NS73 344 aa28.02■■■□□ 2.08
CCND1-206ENST00000545484 ARFGEF2Q9Y6D5 1785 aa28.01■■■□□ 2.08
CCND1-206ENST00000545484 CALD1Q05682 793 aaKnown RBP28.01■■■□□ 2.07
CCND1-206ENST00000545484 C9orf131Q5VYM1 1079 aa28.01■■■□□ 2.07
CCND1-206ENST00000545484 LRP10Q7Z4F1 713 aa28.01■■■□□ 2.07
CCND1-206ENST00000545484 GPTP24298 496 aa28■■■□□ 2.07
CCND1-206ENST00000545484 GTF2E1P29083 439 aaPredicted RBP28■■■□□ 2.07
CCND1-206ENST00000545484 SRGNP10124 158 aa27.99■■■□□ 2.07
CCND1-206ENST00000545484 IFT57Q9NWB7 429 aa27.99■■■□□ 2.07
CCND1-206ENST00000545484 TNRC6CQ9HCJ0 1690 aaKnown RBP27.99■■■□□ 2.07
CCND1-206ENST00000545484 SLX4Q8IY92 1834 aa27.99■■■□□ 2.07
CCND1-206ENST00000545484 SENP3-EIF4A1A0A087X0R7 540 aa27.98■■■□□ 2.07
CCND1-206ENST00000545484 RASSF7Q02833 373 aa27.98■■■□□ 2.07
CCND1-206ENST00000545484 HDGFL1Q5TGJ6 251 aa27.98■■■□□ 2.07
CCND1-206ENST00000545484 STYK1Q6J9G0 422 aa27.98■■■□□ 2.07
CCND1-206ENST00000545484 GIGYF2Q6Y7W6 1299 aaKnown RBP27.98■■■□□ 2.07
CCND1-206ENST00000545484 NYXQ9GZU5 481 aa27.98■■■□□ 2.07
CCND1-206ENST00000545484 RNF181Q9P0P0 153 aa27.98■■■□□ 2.07
CCND1-206ENST00000545484 ZNF219Q9P2Y4 722 aaPredicted RBP27.98■■■□□ 2.07
CCND1-206ENST00000545484 ANKRD36CQ5JPF3 1778 aa27.98■■■□□ 2.07
CCND1-206ENST00000545484 UBN2Q6ZU65 1347 aa27.97■■■□□ 2.07
CCND1-206ENST00000545484 HOXB7P09629 217 aa27.97■■■□□ 2.07
CCND1-206ENST00000545484 ZNF853P0CG23 659 aa27.97■■■□□ 2.07
CCND1-206ENST00000545484 GNAI1P63096 354 aa27.97■■■□□ 2.07
CCND1-206ENST00000545484 CNKSR1Q969H4 720 aa27.97■■■□□ 2.07
CCND1-206ENST00000545484 MASTLQ96GX5 879 aa27.97■■■□□ 2.07
CCND1-206ENST00000545484 DDX21Q9NR30 783 aaKnown RBP eCLIP27.97■■■□□ 2.07
CCND1-206ENST00000545484 CHPF2Q9P2E5 772 aa27.97■■■□□ 2.07
CCND1-206ENST00000545484 CCDC88AQ3V6T2 1871 aa27.97■■■□□ 2.07
CCND1-206ENST00000545484 AIMP1Q12904 312 aaKnown RBP27.96■■■□□ 2.07
CCND1-206ENST00000545484 C21orf2O43822 256 aa27.95■■■□□ 2.06
CCND1-206ENST00000545484 C1QTNF8P60827 252 aa27.95■■■□□ 2.06
CCND1-206ENST00000545484 DUSP27Q5VZP5 1158 aa27.95■■■□□ 2.06
CCND1-206ENST00000545484 COPS6Q7L5N1 327 aa27.95■■■□□ 2.06
CCND1-206ENST00000545484 NUTM1Q86Y26 1132 aa27.95■■■□□ 2.06
CCND1-206ENST00000545484 XAGE3Q8WTP9 111 aa27.95■■■□□ 2.06
CCND1-206ENST00000545484 ABCC12Q96J65 1359 aa27.95■■■□□ 2.06
CCND1-206ENST00000545484 FER1L6Q2WGJ9 1857 aa27.94■■■□□ 2.06
CCND1-206ENST00000545484 PRPF40BQ6NWY9 871 aaKnown RBP27.94■■■□□ 2.06
CCND1-206ENST00000545484 ZNF34Q8IZ26 560 aa27.94■■■□□ 2.06
CCND1-206ENST00000545484 IBTKQ9P2D0 1353 aaPredicted RBP27.94■■■□□ 2.06
CCND1-206ENST00000545484 NPR1P16066 1061 aa27.93■■■□□ 2.06
CCND1-206ENST00000545484 TIAM2Q8IVF5 1701 aa27.92■■■□□ 2.06
CCND1-206ENST00000545484 KLRG2A4D1S0 409 aaPredicted RBP27.92■■■□□ 2.06
CCND1-206ENST00000545484 ERFEQ4G0M1 354 aa27.92■■■□□ 2.06
CCND1-206ENST00000545484 SUSD4Q5VX71 490 aa27.92■■■□□ 2.06
CCND1-206ENST00000545484 NFKBIEO00221 500 aa27.91■■■□□ 2.06
CCND1-206ENST00000545484 DBF4Q9UBU7 674 aaPredicted RBP27.91■■■□□ 2.06
CCND1-206ENST00000545484 LMNB1P20700 586 aa27.9■■■□□ 2.06
CCND1-206ENST00000545484 PARP10Q53GL7 1025 aa27.9■■■□□ 2.06
CCND1-206ENST00000545484 ELL2O00472 640 aaPredicted RBP27.89■■■□□ 2.06
CCND1-206ENST00000545484 PPP1R42Q7Z4L9 355 aa27.89■■■□□ 2.06
CCND1-206ENST00000545484 NTSR2O95665 410 aa27.88■■■□□ 2.05
CCND1-206ENST00000545484 PRELPP51888 382 aa27.88■■■□□ 2.05
CCND1-206ENST00000545484 CCDC27Q2M243 656 aa27.88■■■□□ 2.05
CCND1-206ENST00000545484 RIC1Q4ADV7 1423 aa27.88■■■□□ 2.05
CCND1-206ENST00000545484 HSP90AB3PQ58FF7 597 aa27.87■■■□□ 2.05
CCND1-206ENST00000545484 WWC1Q8IX03 1113 aa27.87■■■□□ 2.05
CCND1-206ENST00000545484 SOGA3Q5TF21 947 aa27.86■■■□□ 2.05
CCND1-206ENST00000545484 HYPKQ9NX55 129 aa27.86■■■□□ 2.05
CCND1-206ENST00000545484 DICER1Q9UPY3 1922 aaKnown RBP27.85■■■□□ 2.05
CCND1-206ENST00000545484 CRY2Q49AN0 593 aa27.85■■■□□ 2.05
CCND1-206ENST00000545484 UTP14AQ9BVJ6 771 aaKnown RBP27.85■■■□□ 2.05
CCND1-206ENST00000545484 KIF3CO14782 793 aa27.84■■■□□ 2.05
CCND1-206ENST00000545484 C8orf58Q8NAV2 365 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms