RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 MTMR7Q9Y216 660 aa10.09□□□□□ -0.79
DDX47-211ENST00000544497 GNEQ9Y223 722 aaKnown RBP10.09□□□□□ -0.79
DDX47-211ENST00000544497 HRH3Q9Y5N1 445 aa10.09□□□□□ -0.79
DDX47-211ENST00000544497 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
DDX47-211ENST00000544497 SHISA8B8ZZ34 492 aa10.08□□□□□ -0.8
DDX47-211ENST00000544497 ARID4AP29374 1257 aaPredicted RBP10.08□□□□□ -0.8
DDX47-211ENST00000544497 LBRQ14739 615 aaKnown RBP10.08□□□□□ -0.8
DDX47-211ENST00000544497 KLRG1Q96E93 195 aa10.08□□□□□ -0.8
DDX47-211ENST00000544497 XAGE2Q96GT9 111 aa10.08□□□□□ -0.8
DDX47-211ENST00000544497 PCDHGA11Q9Y5H2 935 aa10.08□□□□□ -0.8
DDX47-211ENST00000544497 PRMT3O60678 531 aa10.07□□□□□ -0.8
DDX47-211ENST00000544497 UBAP2LQ14157 1087 aaKnown RBP10.07□□□□□ -0.8
DDX47-211ENST00000544497 CCDC27Q2M243 656 aa10.07□□□□□ -0.8
DDX47-211ENST00000544497 GNASQ5JWF2 1037 aa10.07□□□□□ -0.8
DDX47-211ENST00000544497 RGS22Q8NE09 1264 aa10.07□□□□□ -0.8
DDX47-211ENST00000544497 FHDC1Q9C0D6 1143 aaPredicted RBP10.07□□□□□ -0.8
DDX47-211ENST00000544497 GDF2Q9UK05 429 aaPredicted RBP10.07□□□□□ -0.8
DDX47-211ENST00000544497 MKL2Q9ULH7 1088 aa10.07□□□□□ -0.8
DDX47-211ENST00000544497 DKK1O94907 266 aa10.06□□□□□ -0.8
DDX47-211ENST00000544497 GTF2E1P29083 439 aaPredicted RBP10.06□□□□□ -0.8
DDX47-211ENST00000544497 C1orf229Q6ZS94 237 aaPredicted RBP10.06□□□□□ -0.8
DDX47-211ENST00000544497 TXNDC2Q86VQ3 553 aa10.06□□□□□ -0.8
DDX47-211ENST00000544497 HINFPQ9BQA5 517 aa10.06□□□□□ -0.8
DDX47-211ENST00000544497 C4orf17Q53FE4 359 aa10.05□□□□□ -0.8
DDX47-211ENST00000544497 TMEM214Q6NUQ4 689 aaKnown RBP10.05□□□□□ -0.8
DDX47-211ENST00000544497 ALYREFQ86V81 257 aaKnown RBP10.05□□□□□ -0.8
DDX47-211ENST00000544497 LGR5O75473 907 aa10.04□□□□□ -0.8
DDX47-211ENST00000544497 ESCO1Q5FWF5 840 aa10.04□□□□□ -0.8
DDX47-211ENST00000544497 PGBD3Q8N328 593 aa10.04□□□□□ -0.8
DDX47-211ENST00000544497 GOLGA6L1Q8N7Z2 621 aa10.04□□□□□ -0.8
DDX47-211ENST00000544497 EDARADDQ8WWZ3 215 aa10.04□□□□□ -0.8
DDX47-211ENST00000544497 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
DDX47-211ENST00000544497 RUBCNLQ9H714 662 aa10.04□□□□□ -0.8
DDX47-211ENST00000544497 ATXN7L1Q9ULK2 861 aaPredicted RBP10.04□□□□□ -0.8
DDX47-211ENST00000544497 NCAPD3P42695 1498 aa10.04□□□□□ -0.8
DDX47-211ENST00000544497 KRBA1A5PL33 1030 aa10.03□□□□□ -0.8
DDX47-211ENST00000544497 MSX1P28360 303 aa10.03□□□□□ -0.8
DDX47-211ENST00000544497 XP32Q5T750 250 aa10.03□□□□□ -0.8
DDX47-211ENST00000544497 FOXD4L4Q8WXT5 416 aaPredicted RBP10.03□□□□□ -0.8
DDX47-211ENST00000544497 EFHC2Q5JST6 749 aa10.02□□□□□ -0.81
DDX47-211ENST00000544497 RRAGCQ9HB90 399 aa10.02□□□□□ -0.81
DDX47-211ENST00000544497 K7ELQ4 463 aaPredicted RBP10.01□□□□□ -0.81
DDX47-211ENST00000544497 BMP4P12644 408 aa10.01□□□□□ -0.81
DDX47-211ENST00000544497 COL8A1P27658 744 aa10.01□□□□□ -0.81
DDX47-211ENST00000544497 SCNN1AP37088 669 aa10.01□□□□□ -0.81
DDX47-211ENST00000544497 SERPINB4P48594 390 aa10.01□□□□□ -0.81
DDX47-211ENST00000544497 SLCO4C1Q6ZQN7 724 aa10.01□□□□□ -0.81
DDX47-211ENST00000544497 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.01□□□□□ -0.81
DDX47-211ENST00000544497 RHBDD1Q8TEB9 315 aa10.01□□□□□ -0.81
DDX47-211ENST00000544497 KIF21AQ7Z4S6 1674 aa10.01□□□□□ -0.81
DDX47-211ENST00000544497 BAG6P46379 1132 aa10□□□□□ -0.81
DDX47-211ENST00000544497 TSEN2Q8NCE0 465 aaKnown RBP10□□□□□ -0.81
DDX47-211ENST00000544497 ABHD17AQ96GS6 310 aa10□□□□□ -0.81
DDX47-211ENST00000544497 NDFIP2Q9NV92 336 aa10□□□□□ -0.81
DDX47-211ENST00000544497 CXXC1Q9P0U4 656 aaPredicted RBP10□□□□□ -0.81
DDX47-211ENST00000544497 SMARCA2P51531 1590 aa10□□□□□ -0.81
DDX47-211ENST00000544497 C2CD2LO14523 706 aa9.99□□□□□ -0.81
DDX47-211ENST00000544497 FGFR3P22607 806 aa9.99□□□□□ -0.81
DDX47-211ENST00000544497 PPARGC1BQ86YN6 1023 aaKnown RBP9.99□□□□□ -0.81
DDX47-211ENST00000544497 CRISPLD1Q9H336 500 aa9.99□□□□□ -0.81
DDX47-211ENST00000544497 ETNK1Q9HBU6 452 aa9.99□□□□□ -0.81
DDX47-211ENST00000544497 HOXB4P17483 251 aaPredicted RBP9.98□□□□□ -0.81
DDX47-211ENST00000544497 OCLNQ16625 522 aa9.98□□□□□ -0.81
DDX47-211ENST00000544497 C1orf216Q8TAB5 229 aa9.98□□□□□ -0.81
DDX47-211ENST00000544497 ZNF358Q9NW07 568 aa9.98□□□□□ -0.81
DDX47-211ENST00000544497 ATAD2BQ9ULI0 1458 aa9.98□□□□□ -0.81
DDX47-211ENST00000544497 BNIP3LO60238 219 aa9.97□□□□□ -0.81
DDX47-211ENST00000544497 ABL1P00519 1130 aa9.97□□□□□ -0.81
DDX47-211ENST00000544497 AMPD1P23109 780 aa9.97□□□□□ -0.81
DDX47-211ENST00000544497 TLR1Q15399 786 aa9.97□□□□□ -0.81
DDX47-211ENST00000544497 LINC00114Q6XXX2 140 aa9.97□□□□□ -0.81
DDX47-211ENST00000544497 GGA1Q9UJY5 639 aa9.97□□□□□ -0.81
DDX47-211ENST00000544497 HMGXB3Q12766 1538 aa9.97□□□□□ -0.81
DDX47-211ENST00000544497 SOWAHDA6NJG2 315 aa9.96□□□□□ -0.82
DDX47-211ENST00000544497 M0R2N6 131 aa9.96□□□□□ -0.82
DDX47-211ENST00000544497 CTBSQ01459 385 aa9.96□□□□□ -0.82
DDX47-211ENST00000544497 GRIN2CQ14957 1233 aa9.96□□□□□ -0.82
DDX47-211ENST00000544497 MKNK1Q9BUB5 465 aa9.96□□□□□ -0.82
DDX47-211ENST00000544497 BIN2Q9UBW5 565 aaPredicted RBP9.96□□□□□ -0.82
DDX47-211ENST00000544497 PIK3R2O00459 728 aa9.95□□□□□ -0.82
DDX47-211ENST00000544497 STAU1O95793 577 aaKnown RBP9.95□□□□□ -0.82
DDX47-211ENST00000544497 GDF10P55107 478 aa9.95□□□□□ -0.82
DDX47-211ENST00000544497 SUV39H2Q9H5I1 410 aa9.95□□□□□ -0.82
DDX47-211ENST00000544497 TMEM229AB2RXF0 380 aa9.94□□□□□ -0.82
DDX47-211ENST00000544497 GNB5O14775 395 aa9.94□□□□□ -0.82
DDX47-211ENST00000544497 BACH1O14867 736 aa9.94□□□□□ -0.82
DDX47-211ENST00000544497 ARAFP10398 606 aa9.94□□□□□ -0.82
DDX47-211ENST00000544497 EPXP11678 715 aa9.94□□□□□ -0.82
DDX47-211ENST00000544497 PLA2G4AP47712 749 aa9.94□□□□□ -0.82
DDX47-211ENST00000544497 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
DDX47-211ENST00000544497 FIGNL1Q6PIW4 674 aa9.94□□□□□ -0.82
DDX47-211ENST00000544497 SERTAD1Q9UHV2 236 aa9.94□□□□□ -0.82
DDX47-211ENST00000544497 WEE1P30291 646 aa9.93□□□□□ -0.82
DDX47-211ENST00000544497 SCNN1DP51172 638 aa9.93□□□□□ -0.82
DDX47-211ENST00000544497 BTBD6Q96KE9 485 aa9.93□□□□□ -0.82
DDX47-211ENST00000544497 ZNF211Q13398 564 aaPredicted RBP9.92□□□□□ -0.82
DDX47-211ENST00000544497 TNS4Q8IZW8 715 aa9.92□□□□□ -0.82
DDX47-211ENST00000544497 GAS2L2Q8NHY3 880 aa9.92□□□□□ -0.82
DDX47-211ENST00000544497 ANO2Q9NQ90 1003 aa9.92□□□□□ -0.82
DDX47-211ENST00000544497 PCDHGC4Q9Y5F7 938 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms