RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 AEBP2Q6ZN18 517 aaPredicted RBP31.85■■■□□ 2.69
DDX47-211ENST00000544497 CHIC1Q5VXU3 224 aa30.2■■■□□ 2.43
DDX47-211ENST00000544497 SENP3Q9H4L4 574 aaPredicted RBP27.21■■□□□ 1.95
DDX47-211ENST00000544497 PHF23Q9BUL5 403 aaPredicted RBP26.83■■□□□ 1.89
DDX47-211ENST00000544497 FOXD1Q16676 465 aa25.35■■□□□ 1.65
DDX47-211ENST00000544497 PLPPR3Q6T4P5 718 aa24.11■■□□□ 1.45
DDX47-211ENST00000544497 MSH5O43196 834 aa23.78■■□□□ 1.4
DDX47-211ENST00000544497 PIAS4Q8N2W9 510 aaPredicted RBP23.68■■□□□ 1.38
DDX47-211ENST00000544497 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
DDX47-211ENST00000544497 ADRA2BP18089 450 aa23.55■■□□□ 1.36
DDX47-211ENST00000544497 POTEDQ86YR6 584 aa23.31■■□□□ 1.32
DDX47-211ENST00000544497 MAPK8IP2Q13387 824 aaPredicted RBP21.65■■□□□ 1.06
DDX47-211ENST00000544497 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.05
DDX47-211ENST00000544497 DMRT2Q9Y5R5 561 aa21.56■■□□□ 1.04
DDX47-211ENST00000544497 PPP4R3CPQ6ZMV5 832 aa21.11■□□□□ 0.97
DDX47-211ENST00000544497 HOXD11P31277 338 aaPredicted RBP20.74■□□□□ 0.91
DDX47-211ENST00000544497 CNKSR2Q8WXI2 1034 aa20.74■□□□□ 0.91
DDX47-211ENST00000544497 DCAF8L1A6NGE4 600 aa20.66■□□□□ 0.9
DDX47-211ENST00000544497 RNF216Q9NWF9 866 aaPredicted RBP20.57■□□□□ 0.88
DDX47-211ENST00000544497 CACNB1Q02641 598 aaPredicted RBP20.43■□□□□ 0.86
DDX47-211ENST00000544497 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
DDX47-211ENST00000544497 RNF39Q9H2S5 420 aa20.27■□□□□ 0.84
DDX47-211ENST00000544497 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
DDX47-211ENST00000544497 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
DDX47-211ENST00000544497 C1QBPQ07021 282 aaKnown RBP19.98■□□□□ 0.79
DDX47-211ENST00000544497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.751e-10■□□□□ 10.7
DDX47-211ENST00000544497 KCNA4P22459 653 aa19.52■□□□□ 0.72
DDX47-211ENST00000544497 U3KPZ7 1027 aaPredicted RBP19.34■□□□□ 0.69
DDX47-211ENST00000544497 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
DDX47-211ENST00000544497 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
DDX47-211ENST00000544497 CAPN15O75808 1086 aa19.04■□□□□ 0.64
DDX47-211ENST00000544497 DSG3P32926 999 aa18.95■□□□□ 0.62
DDX47-211ENST00000544497 APLP2Q06481 763 aa18.82■□□□□ 0.6
DDX47-211ENST00000544497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.78■□□□□ 0.6
DDX47-211ENST00000544497 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
DDX47-211ENST00000544497 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
DDX47-211ENST00000544497 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
DDX47-211ENST00000544497 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
DDX47-211ENST00000544497 ABCB7O75027 752 aa18.59■□□□□ 0.57
DDX47-211ENST00000544497 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
DDX47-211ENST00000544497 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
DDX47-211ENST00000544497 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
DDX47-211ENST00000544497 POTEHQ6S545 545 aa18.26■□□□□ 0.51
DDX47-211ENST00000544497 POLA2Q14181 598 aa18.19■□□□□ 0.5
DDX47-211ENST00000544497 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
DDX47-211ENST00000544497 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
DDX47-211ENST00000544497 ZBTB22O15209 634 aa17.94■□□□□ 0.46
DDX47-211ENST00000544497 ZBTB12Q9Y330 459 aaPredicted RBP17.86■□□□□ 0.45
DDX47-211ENST00000544497 ATXN8OSP0DMR3 200 aa17.72■□□□□ 0.43
DDX47-211ENST00000544497 CHRDL2Q6WN34 429 aa17.72■□□□□ 0.43
DDX47-211ENST00000544497 AKT1S1Q96B36 256 aa17.67■□□□□ 0.42
DDX47-211ENST00000544497 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
DDX47-211ENST00000544497 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
DDX47-211ENST00000544497 REM2Q8IYK8 340 aaPredicted RBP17.49■□□□□ 0.39
DDX47-211ENST00000544497 FBLN2P98095 1184 aa17.38■□□□□ 0.37
DDX47-211ENST00000544497 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
DDX47-211ENST00000544497 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
DDX47-211ENST00000544497 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
DDX47-211ENST00000544497 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
DDX47-211ENST00000544497 PIP4P2Q8N4L2 257 aa17.28■□□□□ 0.36
DDX47-211ENST00000544497 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
DDX47-211ENST00000544497 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDX47-211ENST00000544497 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
DDX47-211ENST00000544497 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
DDX47-211ENST00000544497 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
DDX47-211ENST00000544497 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
DDX47-211ENST00000544497 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
DDX47-211ENST00000544497 HAX1O00165 279 aa16.98■□□□□ 0.31
DDX47-211ENST00000544497 CLEC11AQ9Y240 323 aa16.96■□□□□ 0.31
DDX47-211ENST00000544497 PRKAR2AP13861 404 aaKnown RBP16.86■□□□□ 0.29
DDX47-211ENST00000544497 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
DDX47-211ENST00000544497 EVX2Q03828 476 aa16.75■□□□□ 0.27
DDX47-211ENST00000544497 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
DDX47-211ENST00000544497 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
DDX47-211ENST00000544497 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
DDX47-211ENST00000544497 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
DDX47-211ENST00000544497 GABBR2O75899 941 aa16.39■□□□□ 0.21
DDX47-211ENST00000544497 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
DDX47-211ENST00000544497 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
DDX47-211ENST00000544497 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
DDX47-211ENST00000544497 CREBZFQ9NS37 354 aa16.25■□□□□ 0.19
DDX47-211ENST00000544497 CLCN6P51797 869 aa16.14■□□□□ 0.17
DDX47-211ENST00000544497 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
DDX47-211ENST00000544497 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.16
DDX47-211ENST00000544497 POTEIP0CG38 1075 aa16.03■□□□□ 0.16
DDX47-211ENST00000544497 LHX8Q68G74 356 aa16.02■□□□□ 0.16
DDX47-211ENST00000544497 PROM2Q8N271 834 aa15.99■□□□□ 0.15
DDX47-211ENST00000544497 NPM1P06748 294 aaKnown RBP eCLIP15.96■□□□□ 0.15
DDX47-211ENST00000544497 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
DDX47-211ENST00000544497 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
DDX47-211ENST00000544497 DCBLD2Q96PD2 775 aa15.94■□□□□ 0.14
DDX47-211ENST00000544497 GALR2O43603 387 aaPredicted RBP15.87■□□□□ 0.13
DDX47-211ENST00000544497 PHF12Q96QT6 1004 aa15.84■□□□□ 0.13
DDX47-211ENST00000544497 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
DDX47-211ENST00000544497 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
DDX47-211ENST00000544497 MS4A3Q96HJ5 214 aa15.64■□□□□ 0.09
DDX47-211ENST00000544497 MIER1Q8N108 512 aa15.62■□□□□ 0.09
DDX47-211ENST00000544497 CCDC61Q9Y6R9 512 aa15.6■□□□□ 0.09
DDX47-211ENST00000544497 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
DDX47-211ENST00000544497 ASTLQ6HA08 431 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms