RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 GTF3C3Q9Y5Q9 886 aa13.78□□□□□ -0.2
DDX11-225ENST00000543511 ATP6V1AP38606 617 aa13.77□□□□□ -0.21
DDX11-225ENST00000543511 IL16Q14005 1332 aa13.77□□□□□ -0.21
DDX11-225ENST00000543511 CASZ1Q86V15 1759 aa13.77□□□□□ -0.21
DDX11-225ENST00000543511 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
DDX11-225ENST00000543511 TSPYL4Q9UJ04 414 aa13.77□□□□□ -0.21
DDX11-225ENST00000543511 C4AP0C0L4 1744 aa13.76□□□□□ -0.21
DDX11-225ENST00000543511 EIF4A1P60842 406 aaKnown RBP13.76□□□□□ -0.21
DDX11-225ENST00000543511 CALD1Q05682 793 aaKnown RBP13.76□□□□□ -0.21
DDX11-225ENST00000543511 ZNF827Q17R98 1081 aa13.76□□□□□ -0.21
DDX11-225ENST00000543511 WDR63Q8IWG1 891 aa13.76□□□□□ -0.21
DDX11-225ENST00000543511 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
DDX11-225ENST00000543511 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
DDX11-225ENST00000543511 MBIPQ9NS73 344 aa13.76□□□□□ -0.21
DDX11-225ENST00000543511 GNAI1P63096 354 aa13.75□□□□□ -0.21
DDX11-225ENST00000543511 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
DDX11-225ENST00000543511 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
DDX11-225ENST00000543511 CNTNAP4Q9C0A0 1308 aa13.74□□□□□ -0.21
DDX11-225ENST00000543511 PRAMEF22A3QJZ6 481 aa13.74□□□□□ -0.21
DDX11-225ENST00000543511 SMYD5Q6GMV2 418 aa13.74□□□□□ -0.21
DDX11-225ENST00000543511 CYP19A1P11511 503 aaPredicted RBP13.73□□□□□ -0.21
DDX11-225ENST00000543511 KRT24Q2M2I5 525 aa13.73□□□□□ -0.21
DDX11-225ENST00000543511 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
DDX11-225ENST00000543511 GIGYF1O75420 1035 aaPredicted RBP13.72□□□□□ -0.21
DDX11-225ENST00000543511 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
DDX11-225ENST00000543511 CRKLP46109 303 aaKnown RBP13.72□□□□□ -0.21
DDX11-225ENST00000543511 HNRNPUQ00839 825 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDX11-225ENST00000543511 SLC15A2Q16348 729 aa13.72□□□□□ -0.21
DDX11-225ENST00000543511 AMIGO3Q86WK7 504 aa13.72□□□□□ -0.21
DDX11-225ENST00000543511 TSR2Q969E8 191 aaKnown RBP13.72□□□□□ -0.21
DDX11-225ENST00000543511 STK32BQ9NY57 414 aa13.72□□□□□ -0.21
DDX11-225ENST00000543511 COL24A1Q17RW2 1714 aa13.71□□□□□ -0.21
DDX11-225ENST00000543511 RC3H1Q5TC82 1133 aaKnown RBP13.71□□□□□ -0.21
DDX11-225ENST00000543511 INTS5Q6P9B9 1019 aaKnown RBP13.71□□□□□ -0.21
DDX11-225ENST00000543511 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.21
DDX11-225ENST00000543511 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
DDX11-225ENST00000543511 BCORQ6W2J9 1755 aa13.71□□□□□ -0.22
DDX11-225ENST00000543511 PNPLA7Q6ZV29 1317 aa13.7□□□□□ -0.22
DDX11-225ENST00000543511 BRPF1P55201 1214 aaPredicted RBP13.7□□□□□ -0.22
DDX11-225ENST00000543511 NBPF14Q5TI25 921 aa13.7□□□□□ -0.22
DDX11-225ENST00000543511 TEX13AQ9BXU3 409 aaPredicted RBP13.7□□□□□ -0.22
DDX11-225ENST00000543511 CCDC87Q9NVE4 849 aa13.7□□□□□ -0.22
DDX11-225ENST00000543511 SCN7AQ01118 1682 aa13.69□□□□□ -0.22
DDX11-225ENST00000543511 HMGB2P26583 209 aaKnown RBP13.69□□□□□ -0.22
DDX11-225ENST00000543511 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
DDX11-225ENST00000543511 AK7Q96M32 723 aa13.69□□□□□ -0.22
DDX11-225ENST00000543511 SLC24A3Q9HC58 644 aa13.69□□□□□ -0.22
DDX11-225ENST00000543511 ZBTB1Q9Y2K1 713 aa13.69□□□□□ -0.22
DDX11-225ENST00000543511 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
DDX11-225ENST00000543511 SOS1Q07889 1333 aaPredicted RBP13.68□□□□□ -0.22
DDX11-225ENST00000543511 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
DDX11-225ENST00000543511 GNPATO15228 680 aa13.68□□□□□ -0.22
DDX11-225ENST00000543511 GALR2O43603 387 aaPredicted RBP13.68□□□□□ -0.22
DDX11-225ENST00000543511 HOXB7P09629 217 aa13.68□□□□□ -0.22
DDX11-225ENST00000543511 SLFN5Q08AF3 891 aa13.68□□□□□ -0.22
DDX11-225ENST00000543511 R3HDM1Q15032 1099 aaKnown RBP13.68□□□□□ -0.22
DDX11-225ENST00000543511 SMIM5Q71RC9 77 aa13.68□□□□□ -0.22
DDX11-225ENST00000543511 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
DDX11-225ENST00000543511 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
DDX11-225ENST00000543511 PSDA5PKW4 1024 aaPredicted RBP13.67□□□□□ -0.22
DDX11-225ENST00000543511 E9PSI1 815 aa13.67□□□□□ -0.22
DDX11-225ENST00000543511 RPS6KA4O75676 772 aa13.67□□□□□ -0.22
DDX11-225ENST00000543511 STARD3NLO95772 234 aa13.67□□□□□ -0.22
DDX11-225ENST00000543511 DUSP27Q5VZP5 1158 aa13.67□□□□□ -0.22
DDX11-225ENST00000543511 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
DDX11-225ENST00000543511 TRMT2AQ8IZ69 625 aaKnown RBP13.67□□□□□ -0.22
DDX11-225ENST00000543511 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
DDX11-225ENST00000543511 MYH16Q9H6N6 1097 aa13.67□□□□□ -0.22
DDX11-225ENST00000543511 NBPF26B4DH59 902 aa13.66□□□□□ -0.22
DDX11-225ENST00000543511 ZMYND10O75800 440 aa13.66□□□□□ -0.22
DDX11-225ENST00000543511 A1BGP04217 495 aa13.66□□□□□ -0.22
DDX11-225ENST00000543511 SSFA2P28290 1259 aa13.66□□□□□ -0.22
DDX11-225ENST00000543511 NBPF10Q6P3W6 841 aaKnown RBP13.66□□□□□ -0.22
DDX11-225ENST00000543511 NBPF15Q8N660 670 aa13.66□□□□□ -0.22
DDX11-225ENST00000543511 PDGFDQ9GZP0 370 aaPredicted RBP13.66□□□□□ -0.22
DDX11-225ENST00000543511 TFCP2L1Q9NZI6 479 aa13.66□□□□□ -0.22
DDX11-225ENST00000543511 COL15A1P39059 1388 aa13.66□□□□□ -0.22
DDX11-225ENST00000543511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
DDX11-225ENST00000543511 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
DDX11-225ENST00000543511 EIF5P55010 431 aaKnown RBP13.65□□□□□ -0.22
DDX11-225ENST00000543511 COL23A1Q86Y22 540 aaPredicted RBP13.65□□□□□ -0.22
DDX11-225ENST00000543511 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.22
DDX11-225ENST00000543511 ERBB4Q15303 1308 aa13.64□□□□□ -0.23
DDX11-225ENST00000543511 ELL2O00472 640 aaPredicted RBP13.64□□□□□ -0.23
DDX11-225ENST00000543511 PHF14O94880 888 aa13.64□□□□□ -0.23
DDX11-225ENST00000543511 CANXP27824 592 aaKnown RBP13.64□□□□□ -0.23
DDX11-225ENST00000543511 EXOSC9Q06265 439 aaKnown RBP13.64□□□□□ -0.23
DDX11-225ENST00000543511 PDIA6Q15084 440 aa13.64□□□□□ -0.23
DDX11-225ENST00000543511 LRP10Q7Z4F1 713 aa13.64□□□□□ -0.23
DDX11-225ENST00000543511 NUP98P52948 1817 aa13.63□□□□□ -0.23
DDX11-225ENST00000543511 EIF2S2P20042 333 aaKnown RBP13.63□□□□□ -0.23
DDX11-225ENST00000543511 IL6STP40189 918 aaPredicted RBP13.63□□□□□ -0.23
DDX11-225ENST00000543511 PROSER3Q2NL68 480 aa13.63□□□□□ -0.23
DDX11-225ENST00000543511 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
DDX11-225ENST00000543511 HDGFL1Q5TGJ6 251 aa13.63□□□□□ -0.23
DDX11-225ENST00000543511 FLAD1Q8NFF5 587 aa13.63□□□□□ -0.23
DDX11-225ENST00000543511 LRP5O75197 1615 aa13.62□□□□□ -0.23
DDX11-225ENST00000543511 VAMP4O75379 141 aa13.62□□□□□ -0.23
DDX11-225ENST00000543511 MLLT3P42568 568 aaPredicted RBP13.62□□□□□ -0.23
DDX11-225ENST00000543511 MICALL2Q8IY33 904 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms