RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 NGEFQ8N5V2 710 aa21.11■□□□□ 0.97
CIT-212ENST00000543239 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
CIT-212ENST00000543239 DUSP27Q5VZP5 1158 aa21.1■□□□□ 0.97
CIT-212ENST00000543239 TTLL7Q6ZT98 887 aa21.1■□□□□ 0.97
CIT-212ENST00000543239 DDX21Q9NR30 783 aaKnown RBP eCLIP21.1■□□□□ 0.97
CIT-212ENST00000543239 BRCA1P38398 1863 aaKnown RBP21.09■□□□□ 0.97
CIT-212ENST00000543239 KCNA3P22001 575 aa21.09■□□□□ 0.97
CIT-212ENST00000543239 HLFQ16534 295 aa21.09■□□□□ 0.97
CIT-212ENST00000543239 PRR5LQ6MZQ0 368 aa21.09■□□□□ 0.97
CIT-212ENST00000543239 CNBD1Q8NA66 436 aa21.09■□□□□ 0.97
CIT-212ENST00000543239 GOLGB1Q14789 3259 aaKnown RBP21.09■□□□□ 0.97
CIT-212ENST00000543239 ATP10DQ9P241 1426 aa21.09■□□□□ 0.97
CIT-212ENST00000543239 CHD4Q14839 1912 aa21.08■□□□□ 0.97
CIT-212ENST00000543239 CCER2I3L3R5 266 aa21.08■□□□□ 0.97
CIT-212ENST00000543239 YY1P25490 414 aa21.08■□□□□ 0.97
CIT-212ENST00000543239 PROSER3Q2NL68 480 aa21.08■□□□□ 0.97
CIT-212ENST00000543239 NECTIN2Q92692 538 aa21.08■□□□□ 0.97
CIT-212ENST00000543239 NIP7Q9Y221 180 aaKnown RBP eCLIP21.08■□□□□ 0.97
CIT-212ENST00000543239 SENP3-EIF4A1A0A087X0R7 540 aa21.07■□□□□ 0.96
CIT-212ENST00000543239 WDR63Q8IWG1 891 aa21.07■□□□□ 0.96
CIT-212ENST00000543239 BRIP1Q9BX63 1249 aa21.07■□□□□ 0.96
CIT-212ENST00000543239 PIM2Q9P1W9 311 aa21.07■□□□□ 0.96
CIT-212ENST00000543239 DBF4Q9UBU7 674 aaPredicted RBP21.07■□□□□ 0.96
CIT-212ENST00000543239 PDZRN3Q9UPQ7 1066 aa21.07■□□□□ 0.96
CIT-212ENST00000543239 NUP98P52948 1817 aa21.06■□□□□ 0.96
CIT-212ENST00000543239 NPHP1O15259 732 aa21.06■□□□□ 0.96
CIT-212ENST00000543239 ANXA1P04083 346 aa21.06■□□□□ 0.96
CIT-212ENST00000543239 ST5P78524 1137 aa21.06■□□□□ 0.96
CIT-212ENST00000543239 GIGYF2Q6Y7W6 1299 aaKnown RBP21.06■□□□□ 0.96
CIT-212ENST00000543239 NBPF5PQ86XG9 351 aaPredicted RBP21.06■□□□□ 0.96
CIT-212ENST00000543239 CHMP4AQ9BY43 222 aa21.06■□□□□ 0.96
CIT-212ENST00000543239 ZBTB3Q9H5J0 574 aa21.06■□□□□ 0.96
CIT-212ENST00000543239 CHPF2Q9P2E5 772 aa21.06■□□□□ 0.96
CIT-212ENST00000543239 WWC3Q9ULE0 1092 aa21.06■□□□□ 0.96
CIT-212ENST00000543239 DLEC1Q9Y238 1755 aa21.05■□□□□ 0.96
CIT-212ENST00000543239 CHRNA5P30532 468 aa21.05■□□□□ 0.96
CIT-212ENST00000543239 BCS1LQ9Y276 419 aa21.05■□□□□ 0.96
CIT-212ENST00000543239 UTRNP46939 3433 aa21.05■□□□□ 0.96
CIT-212ENST00000543239 ANKRD31Q8N7Z5 1873 aa21.05■□□□□ 0.96
CIT-212ENST00000543239 PDE6BP35913 854 aa21.04■□□□□ 0.96
CIT-212ENST00000543239 TPTE2Q6XPS3 522 aa21.04■□□□□ 0.96
CIT-212ENST00000543239 COPS6Q7L5N1 327 aa21.04■□□□□ 0.96
CIT-212ENST00000543239 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
CIT-212ENST00000543239 XAGE3Q8WTP9 111 aa21.04■□□□□ 0.96
CIT-212ENST00000543239 TSR2Q969E8 191 aaKnown RBP21.04■□□□□ 0.96
CIT-212ENST00000543239 IBTKQ9P2D0 1353 aaPredicted RBP21.03■□□□□ 0.96
CIT-212ENST00000543239 H0YIN7 160 aa21.03■□□□□ 0.96
CIT-212ENST00000543239 DALRD3Q5D0E6 543 aaKnown RBP21.03■□□□□ 0.96
CIT-212ENST00000543239 HYPKQ9NX55 129 aa21.03■□□□□ 0.96
CIT-212ENST00000543239 SALL2Q9Y467 1007 aaPredicted RBP21.03■□□□□ 0.96
CIT-212ENST00000543239 ARFGEF1Q9Y6D6 1849 aa21.03■□□□□ 0.96
CIT-212ENST00000543239 ELL2O00472 640 aaPredicted RBP21.02■□□□□ 0.96
CIT-212ENST00000543239 C2CD5Q86YS7 1000 aa21.02■□□□□ 0.96
CIT-212ENST00000543239 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.96
CIT-212ENST00000543239 NYXQ9GZU5 481 aa21.02■□□□□ 0.96
CIT-212ENST00000543239 AIMP1Q12904 312 aaKnown RBP21.01■□□□□ 0.95
CIT-212ENST00000543239 PARP10Q53GL7 1025 aa21■□□□□ 0.95
CIT-212ENST00000543239 HSP90AB3PQ58FF7 597 aa21■□□□□ 0.95
CIT-212ENST00000543239 CCDC24Q8N4L8 307 aa21■□□□□ 0.95
CIT-212ENST00000543239 UBN2Q6ZU65 1347 aa21■□□□□ 0.95
CIT-212ENST00000543239 FANCIQ9NVI1 1328 aa21■□□□□ 0.95
CIT-212ENST00000543239 COL11A2P13942 1736 aaPredicted RBP20.99■□□□□ 0.95
CIT-212ENST00000543239 GPTP24298 496 aa20.99■□□□□ 0.95
CIT-212ENST00000543239 CCDC30Q5VVM6 783 aa20.99■□□□□ 0.95
CIT-212ENST00000543239 DIEXFQ68CQ4 756 aaKnown RBP20.99■□□□□ 0.95
CIT-212ENST00000543239 TSPYL6Q8N831 410 aa20.99■□□□□ 0.95
CIT-212ENST00000543239 ANKRD36CQ5JPF3 1778 aa20.98■□□□□ 0.95
CIT-212ENST00000543239 RIC1Q4ADV7 1423 aa20.98■□□□□ 0.95
CIT-212ENST00000543239 FAM177BA6PVY3 158 aa20.98■□□□□ 0.95
CIT-212ENST00000543239 GTF2E1P29083 439 aaPredicted RBP20.98■□□□□ 0.95
CIT-212ENST00000543239 TTLL6Q8N841 843 aa20.98■□□□□ 0.95
CIT-212ENST00000543239 PLBD2Q8NHP8 589 aa20.98■□□□□ 0.95
CIT-212ENST00000543239 KLRG2A4D1S0 409 aaPredicted RBP20.97■□□□□ 0.95
CIT-212ENST00000543239 TWISTNBQ3B726 338 aaPredicted RBP20.97■□□□□ 0.95
CIT-212ENST00000543239 PPP1R42Q7Z4L9 355 aa20.97■□□□□ 0.95
CIT-212ENST00000543239 ZNF521Q96K83 1311 aa20.97■□□□□ 0.95
CIT-212ENST00000543239 SRGNP10124 158 aa20.96■□□□□ 0.95
CIT-212ENST00000543239 TCIRG1Q13488 830 aa20.96■□□□□ 0.95
CIT-212ENST00000543239 SUSD4Q5VX71 490 aa20.96■□□□□ 0.95
CIT-212ENST00000543239 ANKRD13DQ6ZTN6 518 aa20.96■□□□□ 0.95
CIT-212ENST00000543239 MYH16Q9H6N6 1097 aa20.96■□□□□ 0.95
CIT-212ENST00000543239 RNF123Q5XPI4 1314 aa20.96■□□□□ 0.95
CIT-212ENST00000543239 NTSR2O95665 410 aa20.95■□□□□ 0.94
CIT-212ENST00000543239 GOLGA2Q08379 1002 aa20.95■□□□□ 0.94
CIT-212ENST00000543239 STYK1Q6J9G0 422 aa20.95■□□□□ 0.94
CIT-212ENST00000543239 MASTLQ96GX5 879 aa20.95■□□□□ 0.94
CIT-212ENST00000543239 ARHGAP27Q6ZUM4 889 aa20.94■□□□□ 0.94
CIT-212ENST00000543239 ZNF622Q969S3 477 aaKnown RBP eCLIP20.94■□□□□ 0.945e-6■□□□□ 11.2
CIT-212ENST00000543239 STK31Q9BXU1 1019 aa20.94■□□□□ 0.94
CIT-212ENST00000543239 ABCC12Q96J65 1359 aa20.94■□□□□ 0.94
CIT-212ENST00000543239 NPR1P16066 1061 aa20.93■□□□□ 0.94
CIT-212ENST00000543239 ERFEQ4G0M1 354 aa20.93■□□□□ 0.94
CIT-212ENST00000543239 NUTM1Q86Y26 1132 aa20.93■□□□□ 0.94
CIT-212ENST00000543239 CNKSR1Q969H4 720 aa20.93■□□□□ 0.94
CIT-212ENST00000543239 UTP14AQ9BVJ6 771 aaKnown RBP20.93■□□□□ 0.94
CIT-212ENST00000543239 PHAXQ9H814 394 aaKnown RBP20.93■□□□□ 0.94
CIT-212ENST00000543239 SPINK5Q9NQ38 1064 aaPredicted RBP20.93■□□□□ 0.94
CIT-212ENST00000543239 ARFGEF2Q9Y6D5 1785 aa20.92■□□□□ 0.94
CIT-212ENST00000543239 NLRP10Q86W26 655 aa20.92■□□□□ 0.94
CIT-212ENST00000543239 TNRC6CQ9HCJ0 1690 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms