RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 ANKRD31Q8N7Z5 1873 aa20.13■□□□□ 0.81
ECHDC2-223ENST00000542552 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
ECHDC2-223ENST00000542552 HLFQ16534 295 aa20.13■□□□□ 0.81
ECHDC2-223ENST00000542552 TTLL7Q6ZT98 887 aa20.13■□□□□ 0.81
ECHDC2-223ENST00000542552 NUP98P52948 1817 aa20.13■□□□□ 0.81
ECHDC2-223ENST00000542552 MAP3K15Q6ZN16 1313 aa20.12■□□□□ 0.81
ECHDC2-223ENST00000542552 PROSER3Q2NL68 480 aa20.12■□□□□ 0.81
ECHDC2-223ENST00000542552 PRR5LQ6MZQ0 368 aa20.12■□□□□ 0.81
ECHDC2-223ENST00000542552 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
ECHDC2-223ENST00000542552 NGEFQ8N5V2 710 aa20.12■□□□□ 0.81
ECHDC2-223ENST00000542552 WWC3Q9ULE0 1092 aa20.12■□□□□ 0.81
ECHDC2-223ENST00000542552 DLEC1Q9Y238 1755 aa20.12■□□□□ 0.81
ECHDC2-223ENST00000542552 CHRNA5P30532 468 aa20.11■□□□□ 0.81
ECHDC2-223ENST00000542552 ARFGEF1Q9Y6D6 1849 aa20.11■□□□□ 0.81
ECHDC2-223ENST00000542552 KIF6Q6ZMV9 814 aa20.1■□□□□ 0.81
ECHDC2-223ENST00000542552 BRIP1Q9BX63 1249 aa20.1■□□□□ 0.81
ECHDC2-223ENST00000542552 DDX21Q9NR30 783 aaKnown RBP eCLIP20.1■□□□□ 0.81
ECHDC2-223ENST00000542552 PIM2Q9P1W9 311 aa20.1■□□□□ 0.81
ECHDC2-223ENST00000542552 SENP3-EIF4A1A0A087X0R7 540 aa20.09■□□□□ 0.81
ECHDC2-223ENST00000542552 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
ECHDC2-223ENST00000542552 NIP7Q9Y221 180 aaKnown RBP eCLIP20.09■□□□□ 0.81
ECHDC2-223ENST00000542552 ATP10DQ9P241 1426 aa20.09■□□□□ 0.81
ECHDC2-223ENST00000542552 ANXA1P04083 346 aa20.08■□□□□ 0.81
ECHDC2-223ENST00000542552 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.81
ECHDC2-223ENST00000542552 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
ECHDC2-223ENST00000542552 CNBD1Q8NA66 436 aa20.08■□□□□ 0.81
ECHDC2-223ENST00000542552 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
ECHDC2-223ENST00000542552 BCS1LQ9Y276 419 aa20.08■□□□□ 0.81
ECHDC2-223ENST00000542552 IL16Q14005 1332 aa20.07■□□□□ 0.8
ECHDC2-223ENST00000542552 ZBTB3Q9H5J0 574 aa20.07■□□□□ 0.8
ECHDC2-223ENST00000542552 PDZRN3Q9UPQ7 1066 aa20.07■□□□□ 0.8
ECHDC2-223ENST00000542552 COL11A2P13942 1736 aaPredicted RBP20.06■□□□□ 0.8
ECHDC2-223ENST00000542552 PDE6BP35913 854 aa20.06■□□□□ 0.8
ECHDC2-223ENST00000542552 DALRD3Q5D0E6 543 aaKnown RBP20.06■□□□□ 0.8
ECHDC2-223ENST00000542552 GIGYF2Q6Y7W6 1299 aaKnown RBP20.06■□□□□ 0.8
ECHDC2-223ENST00000542552 NBPF5PQ86XG9 351 aaPredicted RBP20.06■□□□□ 0.8
ECHDC2-223ENST00000542552 C2CD5Q86YS7 1000 aa20.06■□□□□ 0.8
ECHDC2-223ENST00000542552 CCDC24Q8N4L8 307 aa20.06■□□□□ 0.8
ECHDC2-223ENST00000542552 CHPF2Q9P2E5 772 aa20.06■□□□□ 0.8
ECHDC2-223ENST00000542552 H0YIN7 160 aa20.05■□□□□ 0.8
ECHDC2-223ENST00000542552 TPTE2Q6XPS3 522 aa20.05■□□□□ 0.8
ECHDC2-223ENST00000542552 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
ECHDC2-223ENST00000542552 ZNF34Q8IZ26 560 aa20.05■□□□□ 0.8
ECHDC2-223ENST00000542552 C8orf58Q8NAV2 365 aa20.05■□□□□ 0.8
ECHDC2-223ENST00000542552 XAGE3Q8WTP9 111 aa20.05■□□□□ 0.8
ECHDC2-223ENST00000542552 DBF4Q9UBU7 674 aaPredicted RBP20.05■□□□□ 0.8
ECHDC2-223ENST00000542552 ST5P78524 1137 aa20.04■□□□□ 0.8
ECHDC2-223ENST00000542552 KLRG2A4D1S0 409 aaPredicted RBP20.03■□□□□ 0.8
ECHDC2-223ENST00000542552 WDR63Q8IWG1 891 aa20.03■□□□□ 0.8
ECHDC2-223ENST00000542552 TSR2Q969E8 191 aaKnown RBP20.03■□□□□ 0.8
ECHDC2-223ENST00000542552 UBN2Q6ZU65 1347 aa20.02■□□□□ 0.8
ECHDC2-223ENST00000542552 ELL2O00472 640 aaPredicted RBP20.02■□□□□ 0.8
ECHDC2-223ENST00000542552 IBTKQ9P2D0 1353 aaPredicted RBP20.02■□□□□ 0.8
ECHDC2-223ENST00000542552 ANKRD36CQ5JPF3 1778 aa20.02■□□□□ 0.8
ECHDC2-223ENST00000542552 TSPYL6Q8N831 410 aa20.01■□□□□ 0.79
ECHDC2-223ENST00000542552 TTLL6Q8N841 843 aa20.01■□□□□ 0.79
ECHDC2-223ENST00000542552 ZNF784Q8NCA9 323 aaPredicted RBP20.01■□□□□ 0.79
ECHDC2-223ENST00000542552 NYXQ9GZU5 481 aa20.01■□□□□ 0.79
ECHDC2-223ENST00000542552 HYPKQ9NX55 129 aa20.01■□□□□ 0.79
ECHDC2-223ENST00000542552 FAM177BA6PVY3 158 aa20■□□□□ 0.79
ECHDC2-223ENST00000542552 CCER2I3L3R5 266 aa20■□□□□ 0.79
ECHDC2-223ENST00000542552 NPHP1O15259 732 aa20■□□□□ 0.79
ECHDC2-223ENST00000542552 SRGNP10124 158 aa20■□□□□ 0.79
ECHDC2-223ENST00000542552 GPTP24298 496 aa20■□□□□ 0.79
ECHDC2-223ENST00000542552 AIMP1Q12904 312 aaKnown RBP20■□□□□ 0.79
ECHDC2-223ENST00000542552 ARHGAP27Q6ZUM4 889 aa20■□□□□ 0.79
ECHDC2-223ENST00000542552 SALL2Q9Y467 1007 aaPredicted RBP20■□□□□ 0.79
ECHDC2-223ENST00000542552 ADCY9O60503 1353 aa19.99■□□□□ 0.79
ECHDC2-223ENST00000542552 PARP10Q53GL7 1025 aa19.99■□□□□ 0.79
ECHDC2-223ENST00000542552 SUSD4Q5VX71 490 aa19.99■□□□□ 0.79
ECHDC2-223ENST00000542552 STYK1Q6J9G0 422 aa19.99■□□□□ 0.79
ECHDC2-223ENST00000542552 CHMP4AQ9BY43 222 aa19.99■□□□□ 0.79
ECHDC2-223ENST00000542552 RIC1Q4ADV7 1423 aa19.99■□□□□ 0.79
ECHDC2-223ENST00000542552 ARFGEF2Q9Y6D5 1785 aa19.98■□□□□ 0.79
ECHDC2-223ENST00000542552 NTSR2O95665 410 aa19.98■□□□□ 0.79
ECHDC2-223ENST00000542552 HSP90AB3PQ58FF7 597 aa19.98■□□□□ 0.79
ECHDC2-223ENST00000542552 PLBD2Q8NHP8 589 aa19.98■□□□□ 0.79
ECHDC2-223ENST00000542552 FANCIQ9NVI1 1328 aa19.98■□□□□ 0.79
ECHDC2-223ENST00000542552 TNRC6CQ9HCJ0 1690 aaKnown RBP19.97■□□□□ 0.79
ECHDC2-223ENST00000542552 ABCC12Q96J65 1359 aa19.97■□□□□ 0.79
ECHDC2-223ENST00000542552 TCIRG1Q13488 830 aa19.97■□□□□ 0.79
ECHDC2-223ENST00000542552 ERFEQ4G0M1 354 aa19.97■□□□□ 0.79
ECHDC2-223ENST00000542552 ANKRD13DQ6ZTN6 518 aa19.97■□□□□ 0.79
ECHDC2-223ENST00000542552 NUTM1Q86Y26 1132 aa19.97■□□□□ 0.79
ECHDC2-223ENST00000542552 ZNF622Q969S3 477 aaKnown RBP eCLIP19.97■□□□□ 0.79
ECHDC2-223ENST00000542552 MASTLQ96GX5 879 aa19.97■□□□□ 0.79
ECHDC2-223ENST00000542552 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
ECHDC2-223ENST00000542552 GTF2E1P29083 439 aaPredicted RBP19.96■□□□□ 0.79
ECHDC2-223ENST00000542552 CCDC30Q5VVM6 783 aa19.96■□□□□ 0.79
ECHDC2-223ENST00000542552 PPP1R42Q7Z4L9 355 aa19.96■□□□□ 0.79
ECHDC2-223ENST00000542552 SPINK5Q9NQ38 1064 aaPredicted RBP19.96■□□□□ 0.79
ECHDC2-223ENST00000542552 SLX4Q8IY92 1834 aa19.96■□□□□ 0.79
ECHDC2-223ENST00000542552 SBF1O95248 1867 aa19.96■□□□□ 0.79
ECHDC2-223ENST00000542552 NPR1P16066 1061 aa19.95■□□□□ 0.78
ECHDC2-223ENST00000542552 TWISTNBQ3B726 338 aaPredicted RBP19.95■□□□□ 0.78
ECHDC2-223ENST00000542552 CRY2Q49AN0 593 aa19.95■□□□□ 0.78
ECHDC2-223ENST00000542552 NLRP10Q86W26 655 aa19.95■□□□□ 0.78
ECHDC2-223ENST00000542552 CNKSR1Q969H4 720 aa19.95■□□□□ 0.78
ECHDC2-223ENST00000542552 PHAXQ9H814 394 aaKnown RBP19.95■□□□□ 0.78
ECHDC2-223ENST00000542552 SLC10A5Q5PT55 438 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms