RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 DDX46Q7L014 1031 aaKnown RBP8.7□□□□□ -1.02
PPME1-206ENST00000541340 NRBP1Q9UHY1 535 aa8.7□□□□□ -1.02
PPME1-206ENST00000541340 ADAM21Q9UKJ8 722 aa8.7□□□□□ -1.02
PPME1-206ENST00000541340 REREQ9P2R6 1566 aa8.7□□□□□ -1.02
PPME1-206ENST00000541340 NRDCO43847 1150 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 GCFC2P16383 781 aaKnown RBP8.69□□□□□ -1.02
PPME1-206ENST00000541340 RPS6KA3P51812 740 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 CHD1LQ86WJ1 897 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 USP26Q9BXU7 913 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 SOS1Q07889 1333 aaPredicted RBP8.69□□□□□ -1.02
PPME1-206ENST00000541340 PPFIA2O75334 1257 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 NUCB1Q02818 461 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 ERCC6LQ2NKX8 1250 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 MICALL1Q8N3F8 863 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 TMEM57Q8N5G2 664 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 ZNF142P52746 1687 aaPredicted RBP8.69□□□□□ -1.02
PPME1-206ENST00000541340 PREX1Q8TCU6 1659 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 KIF2AO00139 706 aaPredicted RBP8.69□□□□□ -1.02
PPME1-206ENST00000541340 HSP90AB4PQ58FF6 505 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
PPME1-206ENST00000541340 JPH2Q9BR39 696 aaPredicted RBP8.69□□□□□ -1.02
PPME1-206ENST00000541340 ERBINQ96RT1 1412 aa8.69□□□□□ -1.02
PPME1-206ENST00000541340 SLU7O95391 586 aaKnown RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 NFXL1Q6ZNB6 911 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 SYAP1Q96A49 352 aaPredicted RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 SENP3Q9H4L4 574 aaPredicted RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 VEZTQ9HBM0 779 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 ADGRL1O94910 1474 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 RPS6KA5O75582 802 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 NEDD9Q14511 834 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 TPD52L1Q16890 204 aaPredicted RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 LRRN4CLQ8ND94 238 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 CTCFLQ8NI51 663 aaPredicted RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 N4BP2L2Q92802 583 aaPredicted RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 A1CFQ9NQ94 594 aaKnown RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 MCM8Q9UJA3 840 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 CROCC2H7BZ55 1655 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 GSPT1P15170 499 aaKnown RBP8.68□□□□□ -1.02
PPME1-206ENST00000541340 CD151P48509 253 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 SLC5A9Q2M3M2 681 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 BMP2KLQ5H9B9 411 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 GIMAP6Q6P9H5 292 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 NUP155O75694 1391 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 ANKRD30AQ9BXX3 1397 aa8.68□□□□□ -1.02
PPME1-206ENST00000541340 A0A087WUV0 522 aaPredicted RBP8.67□□□□□ -1.02
PPME1-206ENST00000541340 CHMLP26374 656 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 TCP11L2Q8N4U5 519 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 ACRBPQ8NEB7 543 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 SPATS2LQ9NUQ6 558 aaKnown RBP8.67□□□□□ -1.02
PPME1-206ENST00000541340 SPATA31D1Q6ZQQ2 1576 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 USP27XA6NNY8 438 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 RTN2O75298 545 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 MAGEA8P43361 318 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 TMF1P82094 1093 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 SCRN1Q12765 414 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 SMC1AQ14683 1233 aaKnown RBP8.67□□□□□ -1.02
PPME1-206ENST00000541340 ZKSCAN2Q63HK3 967 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 MICAL1Q8TDZ2 1067 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 BAG1Q99933 345 aaPredicted RBP8.67□□□□□ -1.02
PPME1-206ENST00000541340 WDR7Q9Y4E6 1490 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 SIGLEC1Q9BZZ2 1709 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 SASH3O75995 380 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 NEFHP12036 1026 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 USP8P40818 1118 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 SNX1Q13596 522 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 TMCO3Q6UWJ1 677 aa8.67□□□□□ -1.02
PPME1-206ENST00000541340 MSL3Q8N5Y2 521 aaKnown RBP8.67□□□□□ -1.02
PPME1-206ENST00000541340 GOLGA6CA6NDK9 693 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 GOLGA6BA6NDN3 693 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 GOLGA6DP0CG33 693 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 MFSD4BQ5TF39 518 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 USP48Q86UV5 1035 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 DRAXINQ8NBI3 349 aaPredicted RBP8.66□□□□□ -1.02
PPME1-206ENST00000541340 GOPCQ9HD26 462 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 GOLGA6AQ9NYA3 693 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 ROCK1Q13464 1354 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 RICTORQ6R327 1708 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 CRYMQ14894 314 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 ARMC2Q8NEN0 867 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 ATL2Q8NHH9 583 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 PARD3BQ8TEW8 1205 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 SSH1Q8WYL5 1049 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 RMI1Q9H9A7 625 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 PICK1Q9NRD5 415 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 BIN2Q9UBW5 565 aaPredicted RBP8.66□□□□□ -1.02
PPME1-206ENST00000541340 PHF8Q9UPP1 1060 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 DNMT1P26358 1616 aaKnown RBP8.66□□□□□ -1.02
PPME1-206ENST00000541340 CCP110O43303 1012 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 TPD52L2O43399 206 aaKnown RBP8.66□□□□□ -1.02
PPME1-206ENST00000541340 EIF3JO75822 258 aaKnown RBP8.66□□□□□ -1.02
PPME1-206ENST00000541340 SEC31AO94979 1220 aaKnown RBP8.66□□□□□ -1.02
PPME1-206ENST00000541340 GPTP24298 496 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 ICA1Q05084 483 aa8.66□□□□□ -1.02
PPME1-206ENST00000541340 ZRSR2Q15696 482 aaKnown RBP8.66□□□□□ -1.02
PPME1-206ENST00000541340 C16orf71Q8IYS4 520 aaPredicted RBP8.66□□□□□ -1.02
PPME1-206ENST00000541340 NOB1Q9ULX3 412 aaKnown RBP8.66□□□□□ -1.02
PPME1-206ENST00000541340 ARAP3Q8WWN8 1544 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms