RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
PPME1-206ENST00000541340 MYT1Q01538 1121 aa13.08□□□□□ -0.32
PPME1-206ENST00000541340 NISCHQ9Y2I1 1504 aa12.78□□□□□ -0.36
PPME1-206ENST00000541340 HRCP23327 699 aa12.58□□□□□ -0.4
PPME1-206ENST00000541340 TTBK1Q5TCY1 1321 aaPredicted RBP12.56□□□□□ -0.4
PPME1-206ENST00000541340 PPARGC1BQ86YN6 1023 aaKnown RBP12.42□□□□□ -0.42
PPME1-206ENST00000541340 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
PPME1-206ENST00000541340 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
PPME1-206ENST00000541340 BCL11AQ9H165 835 aa12.18□□□□□ -0.46
PPME1-206ENST00000541340 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
PPME1-206ENST00000541340 PCGF6Q9BYE7 350 aa12.1□□□□□ -0.47
PPME1-206ENST00000541340 FAM9AQ8IZU1 332 aaPredicted RBP12.07□□□□□ -0.48
PPME1-206ENST00000541340 APLP2Q06481 763 aa12.04□□□□□ -0.48
PPME1-206ENST00000541340 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
PPME1-206ENST00000541340 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
PPME1-206ENST00000541340 MYO15BQ96JP2 1530 aa11.8□□□□□ -0.52
PPME1-206ENST00000541340 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
PPME1-206ENST00000541340 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
PPME1-206ENST00000541340 GTF3C3Q9Y5Q9 886 aa11.74□□□□□ -0.53
PPME1-206ENST00000541340 NEUROD1Q13562 356 aa11.73□□□□□ -0.53
PPME1-206ENST00000541340 SUPT5HO00267 1087 aaKnown RBP11.67□□□□□ -0.54
PPME1-206ENST00000541340 SHROOM4Q9ULL8 1493 aa11.6□□□□□ -0.55
PPME1-206ENST00000541340 ANP32EQ9BTT0 268 aa11.59□□□□□ -0.55
PPME1-206ENST00000541340 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.56
PPME1-206ENST00000541340 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.57
PPME1-206ENST00000541340 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
PPME1-206ENST00000541340 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
PPME1-206ENST00000541340 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
PPME1-206ENST00000541340 TRIM26Q12899 539 aaPredicted RBP11.38□□□□□ -0.59
PPME1-206ENST00000541340 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
PPME1-206ENST00000541340 ANO8Q9HCE9 1232 aaPredicted RBP11.33□□□□□ -0.6
PPME1-206ENST00000541340 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
PPME1-206ENST00000541340 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
PPME1-206ENST00000541340 UBE2Q2Q8WVN8 375 aa11.25□□□□□ -0.61
PPME1-206ENST00000541340 YTHDC1Q96MU7 727 aaKnown RBP11.2□□□□□ -0.62
PPME1-206ENST00000541340 PLEKHG5O94827 1062 aa11.17□□□□□ -0.62
PPME1-206ENST00000541340 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
PPME1-206ENST00000541340 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
PPME1-206ENST00000541340 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
PPME1-206ENST00000541340 DIEXFQ68CQ4 756 aaKnown RBP11.14□□□□□ -0.63
PPME1-206ENST00000541340 NACADO15069 1562 aa11.13□□□□□ -0.63
PPME1-206ENST00000541340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.09□□□□□ -0.63
PPME1-206ENST00000541340 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
PPME1-206ENST00000541340 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
PPME1-206ENST00000541340 CCDC136Q96JN2 1154 aa11.05□□□□□ -0.64
PPME1-206ENST00000541340 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
PPME1-206ENST00000541340 PKNOX2Q96KN3 472 aa10.99□□□□□ -0.65
PPME1-206ENST00000541340 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
PPME1-206ENST00000541340 PODXL2Q9NZ53 605 aa10.98□□□□□ -0.65
PPME1-206ENST00000541340 CCER1Q8TC90 406 aaPredicted RBP10.96□□□□□ -0.66
PPME1-206ENST00000541340 ABCC9O60706 1549 aa10.95□□□□□ -0.66
PPME1-206ENST00000541340 ZCCHC6Q5VYS8 1495 aaKnown RBP10.91□□□□□ -0.66
PPME1-206ENST00000541340 ERICH6BQ5W0A0 696 aa10.9□□□□□ -0.66
PPME1-206ENST00000541340 MIER1Q8N108 512 aa10.9□□□□□ -0.67
PPME1-206ENST00000541340 CLSPNQ9HAW4 1339 aa10.89□□□□□ -0.67
PPME1-206ENST00000541340 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
PPME1-206ENST00000541340 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
PPME1-206ENST00000541340 DEKP35659 375 aaKnown RBP10.85□□□□□ -0.67
PPME1-206ENST00000541340 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.84□□□□□ -0.67
PPME1-206ENST00000541340 MSH5O43196 834 aa10.83□□□□□ -0.68
PPME1-206ENST00000541340 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
PPME1-206ENST00000541340 RBM19Q9Y4C8 960 aaKnown RBP10.81□□□□□ -0.68
PPME1-206ENST00000541340 CUX2O14529 1486 aa10.76□□□□□ -0.69
PPME1-206ENST00000541340 ZNF316A6NFI3 1004 aaPredicted RBP10.75□□□□□ -0.69
PPME1-206ENST00000541340 BCANQ96GW7 911 aa10.74□□□□□ -0.69
PPME1-206ENST00000541340 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
PPME1-206ENST00000541340 CC2D2AQ9P2K1 1620 aa10.69□□□□□ -0.7
PPME1-206ENST00000541340 IL27Q8NEV9 243 aa10.68□□□□□ -0.7
PPME1-206ENST00000541340 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
PPME1-206ENST00000541340 FANCIQ9NVI1 1328 aa10.62□□□□□ -0.71
PPME1-206ENST00000541340 NEFLP07196 543 aa10.61□□□□□ -0.71
PPME1-206ENST00000541340 ITGAEP38570 1179 aa10.57□□□□□ -0.72
PPME1-206ENST00000541340 ZMYND15Q9H091 742 aa10.57□□□□□ -0.72
PPME1-206ENST00000541340 EIF4G1Q04637 1599 aaKnown RBP10.57□□□□□ -0.72
PPME1-206ENST00000541340 PDE4CQ08493 712 aa10.55□□□□□ -0.72
PPME1-206ENST00000541340 THOC2Q8NI27 1593 aaKnown RBP10.54□□□□□ -0.72
PPME1-206ENST00000541340 KCNH8Q96L42 1107 aa10.54□□□□□ -0.72
PPME1-206ENST00000541340 AEBP2Q6ZN18 517 aaPredicted RBP10.52□□□□□ -0.73
PPME1-206ENST00000541340 PDIA4P13667 645 aaKnown RBP10.52□□□□□ -0.73
PPME1-206ENST00000541340 FGD1P98174 961 aa10.51□□□□□ -0.73
PPME1-206ENST00000541340 FKBP8Q14318 412 aa10.51□□□□□ -0.73
PPME1-206ENST00000541340 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
PPME1-206ENST00000541340 NBR1Q14596 966 aa10.47□□□□□ -0.73
PPME1-206ENST00000541340 VSIG10Q8N0Z9 540 aa10.47□□□□□ -0.73
PPME1-206ENST00000541340 GLIPR1L2Q4G1C9 344 aa10.47□□□□□ -0.73
PPME1-206ENST00000541340 TIMELESSQ9UNS1 1208 aa10.47□□□□□ -0.73
PPME1-206ENST00000541340 AAMPQ13685 434 aa10.45□□□□□ -0.74
PPME1-206ENST00000541340 KLHL34Q8N239 644 aa10.45□□□□□ -0.74
PPME1-206ENST00000541340 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
PPME1-206ENST00000541340 RBM10P98175 930 aaKnown RBP10.42□□□□□ -0.74
PPME1-206ENST00000541340 HNRNPUL2Q1KMD3 747 aaKnown RBP10.39□□□□□ -0.75
PPME1-206ENST00000541340 RSPH6AQ9H0K4 717 aa10.35□□□□□ -0.75
PPME1-206ENST00000541340 C11orf95C9JLR9 678 aaPredicted RBP10.35□□□□□ -0.75
PPME1-206ENST00000541340 NOP58Q9Y2X3 529 aaKnown RBP10.35□□□□□ -0.75
PPME1-206ENST00000541340 PEG3Q9GZU2 1588 aa10.35□□□□□ -0.75
PPME1-206ENST00000541340 RTL5Q5HYW3 569 aaPredicted RBP10.33□□□□□ -0.76
PPME1-206ENST00000541340 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
PPME1-206ENST00000541340 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
PPME1-206ENST00000541340 IRX6P78412 446 aaPredicted RBP10.3□□□□□ -0.76
PPME1-206ENST00000541340 CDK11AQ9UQ88 783 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms