RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 EID1Q9Y6B2 187 aa13.42□□□□□ -0.26
CPT1A-206ENST00000540367 IGSF1Q8N6C5 1336 aa13.42□□□□□ -0.26
CPT1A-206ENST00000540367 SBNO1A3KN83 1393 aa13.42□□□□□ -0.26
CPT1A-206ENST00000540367 LARGE1O95461 756 aa13.41□□□□□ -0.26
CPT1A-206ENST00000540367 DNM1Q05193 864 aaKnown RBP13.41□□□□□ -0.26
CPT1A-206ENST00000540367 CHAF1AQ13111 956 aaPredicted RBP13.41□□□□□ -0.26
CPT1A-206ENST00000540367 MTMR6Q9Y217 621 aa13.41□□□□□ -0.26
CPT1A-206ENST00000540367 GOLGA6L6A8MZA4 724 aa13.41□□□□□ -0.26
CPT1A-206ENST00000540367 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
CPT1A-206ENST00000540367 GJB2P29033 226 aa13.41□□□□□ -0.26
CPT1A-206ENST00000540367 PPP4R3BQ5MIZ7 849 aa13.41□□□□□ -0.26
CPT1A-206ENST00000540367 PPP1R42Q7Z4L9 355 aa13.41□□□□□ -0.26
CPT1A-206ENST00000540367 LARP6Q9BRS8 491 aaKnown RBP13.41□□□□□ -0.26
CPT1A-206ENST00000540367 HYPKQ9NX55 129 aa13.41□□□□□ -0.26
CPT1A-206ENST00000540367 MAP3K5Q99683 1374 aa13.41□□□□□ -0.26
CPT1A-206ENST00000540367 FAM177BA6PVY3 158 aa13.4□□□□□ -0.26
CPT1A-206ENST00000540367 CCDC192P0DO97 292 aa13.4□□□□□ -0.26
CPT1A-206ENST00000540367 CASTP20810 708 aaKnown RBP13.4□□□□□ -0.26
CPT1A-206ENST00000540367 KIF1BPQ96EK5 621 aa13.4□□□□□ -0.26
CPT1A-206ENST00000540367 PLEKHG1Q9ULL1 1385 aa13.4□□□□□ -0.26
CPT1A-206ENST00000540367 CCDC83Q8IWF9 413 aa13.4□□□□□ -0.26
CPT1A-206ENST00000540367 CHD2O14647 1828 aaKnown RBP13.4□□□□□ -0.27
CPT1A-206ENST00000540367 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
CPT1A-206ENST00000540367 RIOK3O14730 519 aaKnown RBP13.39□□□□□ -0.27
CPT1A-206ENST00000540367 ATP2B3Q16720 1220 aa13.39□□□□□ -0.27
CPT1A-206ENST00000540367 VPS53Q5VIR6 699 aa13.39□□□□□ -0.27
CPT1A-206ENST00000540367 ZSCAN31Q96LW9 406 aaPredicted RBP13.39□□□□□ -0.27
CPT1A-206ENST00000540367 SH2B1Q9NRF2 756 aaPredicted RBP13.39□□□□□ -0.27
CPT1A-206ENST00000540367 CPA1P15085 419 aa13.39□□□□□ -0.27
CPT1A-206ENST00000540367 CBX1P83916 185 aa13.39□□□□□ -0.27
CPT1A-206ENST00000540367 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
CPT1A-206ENST00000540367 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
CPT1A-206ENST00000540367 ANKRD7Q92527 254 aa13.39□□□□□ -0.27
CPT1A-206ENST00000540367 EYA1Q99502 592 aa13.39□□□□□ -0.27
CPT1A-206ENST00000540367 SPG7Q9UQ90 795 aa13.39□□□□□ -0.27
CPT1A-206ENST00000540367 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
CPT1A-206ENST00000540367 SPC24Q8NBT2 197 aa13.38□□□□□ -0.27
CPT1A-206ENST00000540367 FAM200AQ8TCP9 573 aa13.38□□□□□ -0.27
CPT1A-206ENST00000540367 GTPBP4Q9BZE4 634 aaKnown RBP13.38□□□□□ -0.27
CPT1A-206ENST00000540367 TM6SF1Q9BZW5 370 aa13.38□□□□□ -0.27
CPT1A-206ENST00000540367 CTIFO43310 598 aaKnown RBP13.38□□□□□ -0.27
CPT1A-206ENST00000540367 AMPHP49418 695 aa13.38□□□□□ -0.27
CPT1A-206ENST00000540367 C14orf37Q86TY3 774 aa13.38□□□□□ -0.27
CPT1A-206ENST00000540367 PDRG1Q9NUG6 133 aa13.38□□□□□ -0.27
CPT1A-206ENST00000540367 ZHX1Q9UKY1 873 aaPredicted RBP13.38□□□□□ -0.27
CPT1A-206ENST00000540367 TTC41PQ6P2S7 1318 aa13.37□□□□□ -0.27
CPT1A-206ENST00000540367 TTC21AQ8NDW8 1320 aa13.37□□□□□ -0.27
CPT1A-206ENST00000540367 SRGAP3O43295 1099 aa13.37□□□□□ -0.27
CPT1A-206ENST00000540367 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
CPT1A-206ENST00000540367 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
CPT1A-206ENST00000540367 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
CPT1A-206ENST00000540367 ST3GAL1Q11201 340 aa13.37□□□□□ -0.27
CPT1A-206ENST00000540367 RUFY2Q8WXA3 655 aa13.37□□□□□ -0.27
CPT1A-206ENST00000540367 KCNB2Q92953 911 aa13.37□□□□□ -0.27
CPT1A-206ENST00000540367 JAKMIP1Q96N16 626 aaKnown RBP13.37□□□□□ -0.27
CPT1A-206ENST00000540367 ZSWIM6Q9HCJ5 1215 aa13.37□□□□□ -0.27
CPT1A-206ENST00000540367 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
CPT1A-206ENST00000540367 ADAMTSL3P82987 1691 aa13.36□□□□□ -0.27
CPT1A-206ENST00000540367 GLRX3O76003 335 aaKnown RBP13.36□□□□□ -0.27
CPT1A-206ENST00000540367 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
CPT1A-206ENST00000540367 ADCK5Q3MIX3 580 aa13.36□□□□□ -0.27
CPT1A-206ENST00000540367 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
CPT1A-206ENST00000540367 CYP46A1Q9Y6A2 500 aa13.36□□□□□ -0.27
CPT1A-206ENST00000540367 ELP1O95163 1332 aa13.36□□□□□ -0.27
CPT1A-206ENST00000540367 FER1L4A9Z1Z3 1794 aa13.36□□□□□ -0.27
CPT1A-206ENST00000540367 HDGFL1Q5TGJ6 251 aa13.36□□□□□ -0.27
CPT1A-206ENST00000540367 NUP62CLQ9H1M0 184 aa13.36□□□□□ -0.27
CPT1A-206ENST00000540367 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
CPT1A-206ENST00000540367 CCDC171Q6TFL3 1326 aa13.35□□□□□ -0.27
CPT1A-206ENST00000540367 ANXA1P04083 346 aa13.35□□□□□ -0.27
CPT1A-206ENST00000540367 PDIA4P13667 645 aaKnown RBP13.35□□□□□ -0.27
CPT1A-206ENST00000540367 KRT85P78386 507 aa13.35□□□□□ -0.27
CPT1A-206ENST00000540367 PTH1RQ03431 593 aa13.35□□□□□ -0.27
CPT1A-206ENST00000540367 TTC6Q86TZ1 520 aa13.35□□□□□ -0.27
CPT1A-206ENST00000540367 THEMISQ8N1K5 641 aaPredicted RBP13.35□□□□□ -0.27
CPT1A-206ENST00000540367 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
CPT1A-206ENST00000540367 PTGS1P23219 599 aa13.35□□□□□ -0.27
CPT1A-206ENST00000540367 TYRO3Q06418 890 aa13.35□□□□□ -0.27
CPT1A-206ENST00000540367 TAF7Q15545 349 aaPredicted RBP13.35□□□□□ -0.27
CPT1A-206ENST00000540367 ME3Q16798 604 aa13.35□□□□□ -0.27
CPT1A-206ENST00000540367 PRPF40BQ6NWY9 871 aaKnown RBP13.35□□□□□ -0.27
CPT1A-206ENST00000540367 IL17REQ8NFR9 667 aa13.34□□□□□ -0.27
CPT1A-206ENST00000540367 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
CPT1A-206ENST00000540367 NBPF7P0C2Y1 421 aaPredicted RBP13.34□□□□□ -0.27
CPT1A-206ENST00000540367 NLRP6P59044 892 aa13.34□□□□□ -0.27
CPT1A-206ENST00000540367 PIK3C2AO00443 1686 aa13.33□□□□□ -0.28
CPT1A-206ENST00000540367 KDM4FA0A1W2PPD8 638 aa13.33□□□□□ -0.28
CPT1A-206ENST00000540367 KIF20AO95235 890 aa13.33□□□□□ -0.28
CPT1A-206ENST00000540367 LIG1P18858 919 aa13.33□□□□□ -0.28
CPT1A-206ENST00000540367 EIF2S2P20042 333 aaKnown RBP13.33□□□□□ -0.28
CPT1A-206ENST00000540367 SYCP1Q15431 976 aa13.33□□□□□ -0.28
CPT1A-206ENST00000540367 LARP1BQ659C4 914 aaKnown RBP13.33□□□□□ -0.28
CPT1A-206ENST00000540367 TBX22Q9Y458 520 aa13.33□□□□□ -0.28
CPT1A-206ENST00000540367 ADGRL3Q9HAR2 1447 aa13.33□□□□□ -0.28
CPT1A-206ENST00000540367 NECTIN1Q15223 517 aa13.33□□□□□ -0.28
CPT1A-206ENST00000540367 LUZP1Q86V48 1076 aa13.33□□□□□ -0.28
CPT1A-206ENST00000540367 ZKSCAN1P17029 563 aaPredicted RBP13.32□□□□□ -0.28
CPT1A-206ENST00000540367 U2AF2P26368 475 aaKnown RBP eCLIP13.32□□□□□ -0.284e-8■■□□□ 14.1
CPT1A-206ENST00000540367 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 NECAB1Q8N987 351 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms