RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ZNF622Q969S3 477 aaKnown RBP eCLIP29.22■■■□□ 2.27
SCARB1-206ENST00000539320 TSPYL4Q9UJ04 414 aa29.22■■■□□ 2.27
SCARB1-206ENST00000539320 NBPF5PQ86XG9 351 aaPredicted RBP29.21■■■□□ 2.27
SCARB1-206ENST00000539320 WDR43Q15061 677 aaKnown RBP eCLIP29.2■■■□□ 2.26
SCARB1-206ENST00000539320 NIP7Q9Y221 180 aaKnown RBP eCLIP29.2■■■□□ 2.26
SCARB1-206ENST00000539320 CCDC146Q8IYE0 955 aa29.19■■■□□ 2.26
SCARB1-206ENST00000539320 PRKRIP1Q9H875 184 aaPredicted RBP29.18■■■□□ 2.26
SCARB1-206ENST00000539320 RRP7AQ9Y3A4 280 aaKnown RBP29.17■■■□□ 2.26
SCARB1-206ENST00000539320 ERBB4Q15303 1308 aa29.17■■■□□ 2.26
SCARB1-206ENST00000539320 HLFQ16534 295 aa29.16■■■□□ 2.26
SCARB1-206ENST00000539320 NGEFQ8N5V2 710 aa29.16■■■□□ 2.26
SCARB1-206ENST00000539320 NMRK2Q9NPI5 230 aa29.16■■■□□ 2.26
SCARB1-206ENST00000539320 BABAM1Q9NWV8 329 aa29.16■■■□□ 2.26
SCARB1-206ENST00000539320 ZC3H4Q9UPT8 1303 aaKnown RBP29.16■■■□□ 2.26
SCARB1-206ENST00000539320 NFKBIEO00221 500 aa29.15■■■□□ 2.26
SCARB1-206ENST00000539320 LMNB1P20700 586 aa29.15■■■□□ 2.26
SCARB1-206ENST00000539320 STYK1Q6J9G0 422 aa29.15■■■□□ 2.26
SCARB1-206ENST00000539320 ARFGEF2Q9Y6D5 1785 aa29.14■■■□□ 2.26
SCARB1-206ENST00000539320 SRGNP10124 158 aa29.14■■■□□ 2.26
SCARB1-206ENST00000539320 KIF6Q6ZMV9 814 aa29.14■■■□□ 2.26
SCARB1-206ENST00000539320 CNKSR1Q969H4 720 aa29.14■■■□□ 2.26
SCARB1-206ENST00000539320 RUNDC1Q96C34 613 aa29.14■■■□□ 2.26
SCARB1-206ENST00000539320 MAP3K15Q6ZN16 1313 aa29.14■■■□□ 2.25
SCARB1-206ENST00000539320 KDM2BQ8NHM5 1336 aa29.14■■■□□ 2.25
SCARB1-206ENST00000539320 ERVV-1B6SEH8 477 aa29.13■■■□□ 2.25
SCARB1-206ENST00000539320 MYL6BP14649 208 aa29.13■■■□□ 2.25
SCARB1-206ENST00000539320 TPTE2Q6XPS3 522 aa29.13■■■□□ 2.25
SCARB1-206ENST00000539320 MASTLQ96GX5 879 aa29.13■■■□□ 2.25
SCARB1-206ENST00000539320 C21orf2O43822 256 aa29.12■■■□□ 2.25
SCARB1-206ENST00000539320 PRELPP51888 382 aa29.12■■■□□ 2.25
SCARB1-206ENST00000539320 NEUROD2Q15784 382 aa29.12■■■□□ 2.25
SCARB1-206ENST00000539320 TTLL7Q6ZT98 887 aa29.12■■■□□ 2.25
SCARB1-206ENST00000539320 ZNF219Q9P2Y4 722 aaPredicted RBP29.12■■■□□ 2.25
SCARB1-206ENST00000539320 CACNA1SQ13698 1873 aa29.12■■■□□ 2.25
SCARB1-206ENST00000539320 TIAM2Q8IVF5 1701 aa29.11■■■□□ 2.25
SCARB1-206ENST00000539320 FAM177BA6PVY3 158 aa29.11■■■□□ 2.25
SCARB1-206ENST00000539320 NUP98P52948 1817 aa29.1■■■□□ 2.25
SCARB1-206ENST00000539320 SLX4Q8IY92 1834 aa29.1■■■□□ 2.25
SCARB1-206ENST00000539320 TNRC6CQ9HCJ0 1690 aaKnown RBP29.1■■■□□ 2.25
SCARB1-206ENST00000539320 HSPA6P17066 643 aa29.1■■■□□ 2.25
SCARB1-206ENST00000539320 PRPF40BQ6NWY9 871 aaKnown RBP29.1■■■□□ 2.25
SCARB1-206ENST00000539320 ADAMTS8Q9UP79 889 aa29.1■■■□□ 2.25
SCARB1-206ENST00000539320 FER1L6Q2WGJ9 1857 aa29.1■■■□□ 2.25
SCARB1-206ENST00000539320 TOMM70O94826 608 aa29.09■■■□□ 2.25
SCARB1-206ENST00000539320 ZBTB3Q9H5J0 574 aa29.08■■■□□ 2.25
SCARB1-206ENST00000539320 CCDC88AQ3V6T2 1871 aa29.08■■■□□ 2.25
SCARB1-206ENST00000539320 KLRG2A4D1S0 409 aaPredicted RBP29.07■■■□□ 2.24
SCARB1-206ENST00000539320 NPR1P16066 1061 aa29.07■■■□□ 2.24
SCARB1-206ENST00000539320 EIF2S2P20042 333 aaKnown RBP29.07■■■□□ 2.24
SCARB1-206ENST00000539320 IBTKQ9P2D0 1353 aaPredicted RBP29.07■■■□□ 2.24
SCARB1-206ENST00000539320 TRIM35Q9UPQ4 493 aa29.07■■■□□ 2.24
SCARB1-206ENST00000539320 ABCC12Q96J65 1359 aa29.06■■■□□ 2.24
SCARB1-206ENST00000539320 LTBP3Q9NS15 1303 aa29.06■■■□□ 2.24
SCARB1-206ENST00000539320 GTF2E1P29083 439 aaPredicted RBP29.06■■■□□ 2.24
SCARB1-206ENST00000539320 SOGA3Q5TF21 947 aa29.06■■■□□ 2.24
SCARB1-206ENST00000539320 NYXQ9GZU5 481 aa29.06■■■□□ 2.24
SCARB1-206ENST00000539320 TAOK3Q9H2K8 898 aa29.05■■■□□ 2.24
SCARB1-206ENST00000539320 GPTP24298 496 aa29.04■■■□□ 2.24
SCARB1-206ENST00000539320 PDIA6Q15084 440 aa29.04■■■□□ 2.24
SCARB1-206ENST00000539320 LRP10Q7Z4F1 713 aa29.04■■■□□ 2.24
SCARB1-206ENST00000539320 C16orf71Q8IYS4 520 aaPredicted RBP29.04■■■□□ 2.24
SCARB1-206ENST00000539320 UBN2Q6ZU65 1347 aa29.03■■■□□ 2.24
SCARB1-206ENST00000539320 CHL1O00533 1208 aa29.03■■■□□ 2.24
SCARB1-206ENST00000539320 ZEB1P37275 1124 aaPredicted RBP29.02■■■□□ 2.24
SCARB1-206ENST00000539320 PROSER3Q2NL68 480 aa29.02■■■□□ 2.24
SCARB1-206ENST00000539320 GIGYF2Q6Y7W6 1299 aaKnown RBP29.02■■■□□ 2.24
SCARB1-206ENST00000539320 RBM46Q8TBY0 533 aaKnown RBP29.02■■■□□ 2.24
SCARB1-206ENST00000539320 LAS1LQ9Y4W2 734 aaKnown RBP29.02■■■□□ 2.24
SCARB1-206ENST00000539320 DICER1Q9UPY3 1922 aaKnown RBP29.02■■■□□ 2.24
SCARB1-206ENST00000539320 RIC1Q4ADV7 1423 aa29.02■■■□□ 2.24
SCARB1-206ENST00000539320 ANXA1P04083 346 aa29.01■■■□□ 2.23
SCARB1-206ENST00000539320 NUTM1Q86Y26 1132 aa29.01■■■□□ 2.23
SCARB1-206ENST00000539320 RRAGCQ9HB90 399 aa29.01■■■□□ 2.23
SCARB1-206ENST00000539320 CEP350Q5VT06 3117 aa29■■■□□ 2.23
SCARB1-206ENST00000539320 GLTPD2A6NH11 291 aa29■■■□□ 2.23
SCARB1-206ENST00000539320 CCDC93Q567U6 631 aa29■■■□□ 2.23
SCARB1-206ENST00000539320 KRT24Q2M2I5 525 aa28.99■■■□□ 2.23
SCARB1-206ENST00000539320 ZNF34Q8IZ26 560 aa28.99■■■□□ 2.23
SCARB1-206ENST00000539320 C7orf43Q8WVR3 580 aa28.99■■■□□ 2.23
SCARB1-206ENST00000539320 ERFEQ4G0M1 354 aa28.98■■■□□ 2.23
SCARB1-206ENST00000539320 NECTIN2Q92692 538 aa28.98■■■□□ 2.23
SCARB1-206ENST00000539320 CRY2Q49AN0 593 aa28.97■■■□□ 2.23
SCARB1-206ENST00000539320 PARP10Q53GL7 1025 aa28.97■■■□□ 2.23
SCARB1-206ENST00000539320 SUSD4Q5VX71 490 aa28.97■■■□□ 2.23
SCARB1-206ENST00000539320 NTSR2O95665 410 aa28.96■■■□□ 2.23
SCARB1-206ENST00000539320 HOXB7P09629 217 aa28.95■■■□□ 2.22
SCARB1-206ENST00000539320 ALDH1B1P30837 517 aa28.95■■■□□ 2.22
SCARB1-206ENST00000539320 DDX21Q9NR30 783 aaKnown RBP eCLIP28.95■■■□□ 2.22
SCARB1-206ENST00000539320 ANKRD36CQ5JPF3 1778 aa28.94■■■□□ 2.22
SCARB1-206ENST00000539320 APAF1O14727 1248 aa28.94■■■□□ 2.22
SCARB1-206ENST00000539320 PPP1R42Q7Z4L9 355 aa28.94■■■□□ 2.22
SCARB1-206ENST00000539320 XAGE3Q8WTP9 111 aa28.94■■■□□ 2.22
SCARB1-206ENST00000539320 CFAP44Q96MT7 982 aa28.94■■■□□ 2.22
SCARB1-206ENST00000539320 APLP1P51693 650 aa28.93■■■□□ 2.22
SCARB1-206ENST00000539320 FSTL1Q12841 308 aa28.93■■■□□ 2.22
SCARB1-206ENST00000539320 DPY19L2Q6NUT2 758 aa28.93■■■□□ 2.22
SCARB1-206ENST00000539320 COPS6Q7L5N1 327 aa28.93■■■□□ 2.22
SCARB1-206ENST00000539320 WDR90Q96KV7 1748 aa28.93■■■□□ 2.22
SCARB1-206ENST00000539320 VEGFAP15692 232 aaPredicted RBP28.92■■■□□ 2.22
SCARB1-206ENST00000539320 FKBP4Q02790 459 aaKnown RBP eCLIP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms