RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 NLGN2Q8NFZ4 835 aa19.47■□□□□ 0.71
PRPF19-203ENST00000539180 DDX21Q9NR30 783 aaKnown RBP eCLIP19.47■□□□□ 0.71
PRPF19-203ENST00000539180 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
PRPF19-203ENST00000539180 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
PRPF19-203ENST00000539180 ANXA1P04083 346 aa19.46■□□□□ 0.71
PRPF19-203ENST00000539180 MYL6BP14649 208 aa19.46■□□□□ 0.71
PRPF19-203ENST00000539180 TBC1D9BQ66K14 1250 aa19.46■□□□□ 0.71
PRPF19-203ENST00000539180 TTLL7Q6ZT98 887 aa19.46■□□□□ 0.71
PRPF19-203ENST00000539180 NPM2Q86SE8 214 aaKnown RBP19.46■□□□□ 0.71
PRPF19-203ENST00000539180 TSPYL6Q8N831 410 aa19.46■□□□□ 0.71
PRPF19-203ENST00000539180 CHPF2Q9P2E5 772 aa19.46■□□□□ 0.71
PRPF19-203ENST00000539180 CACNA1FO60840 1977 aa19.46■□□□□ 0.71
PRPF19-203ENST00000539180 MAP3K15Q6ZN16 1313 aa19.46■□□□□ 0.71
PRPF19-203ENST00000539180 CLEC4GQ6UXB4 293 aa19.45■□□□□ 0.7
PRPF19-203ENST00000539180 NECTIN2Q92692 538 aa19.45■□□□□ 0.7
PRPF19-203ENST00000539180 ERVV-1B6SEH8 477 aa19.44■□□□□ 0.7
PRPF19-203ENST00000539180 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
PRPF19-203ENST00000539180 TNRC6CQ9HCJ0 1690 aaKnown RBP19.43■□□□□ 0.7
PRPF19-203ENST00000539180 DBF4Q9UBU7 674 aaPredicted RBP19.43■□□□□ 0.7
PRPF19-203ENST00000539180 ZNF652Q9Y2D9 606 aa19.43■□□□□ 0.7
PRPF19-203ENST00000539180 ELL2O00472 640 aaPredicted RBP19.42■□□□□ 0.7
PRPF19-203ENST00000539180 HLFQ16534 295 aa19.42■□□□□ 0.7
PRPF19-203ENST00000539180 KIF6Q6ZMV9 814 aa19.42■□□□□ 0.7
PRPF19-203ENST00000539180 ARFGEF1Q9Y6D6 1849 aa19.41■□□□□ 0.7
PRPF19-203ENST00000539180 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
PRPF19-203ENST00000539180 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
PRPF19-203ENST00000539180 SERPINB2P05120 415 aa19.4■□□□□ 0.7
PRPF19-203ENST00000539180 BICDL1Q6ZP65 573 aa19.4■□□□□ 0.7
PRPF19-203ENST00000539180 XAGE3Q8WTP9 111 aa19.4■□□□□ 0.7
PRPF19-203ENST00000539180 ZBTB3Q9H5J0 574 aa19.4■□□□□ 0.7
PRPF19-203ENST00000539180 MYH16Q9H6N6 1097 aa19.4■□□□□ 0.7
PRPF19-203ENST00000539180 GIGYF2Q6Y7W6 1299 aaKnown RBP19.39■□□□□ 0.69
PRPF19-203ENST00000539180 COPS6Q7L5N1 327 aa19.39■□□□□ 0.69
PRPF19-203ENST00000539180 LAMB2P55268 1798 aa19.39■□□□□ 0.69
PRPF19-203ENST00000539180 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
PRPF19-203ENST00000539180 GOLGA2Q08379 1002 aa19.38■□□□□ 0.69
PRPF19-203ENST00000539180 RIC1Q4ADV7 1423 aa19.38■□□□□ 0.69
PRPF19-203ENST00000539180 PRR5LQ6MZQ0 368 aa19.38■□□□□ 0.69
PRPF19-203ENST00000539180 UBN2Q6ZU65 1347 aa19.38■□□□□ 0.69
PRPF19-203ENST00000539180 HYPKQ9NX55 129 aa19.38■□□□□ 0.69
PRPF19-203ENST00000539180 TGFB2P61812 414 aa19.37■□□□□ 0.69
PRPF19-203ENST00000539180 CCDC30Q5VVM6 783 aa19.37■□□□□ 0.69
PRPF19-203ENST00000539180 SETDB2Q96T68 719 aa19.37■□□□□ 0.69
PRPF19-203ENST00000539180 NIP7Q9Y221 180 aaKnown RBP eCLIP19.37■□□□□ 0.69
PRPF19-203ENST00000539180 E9PSI1 815 aa19.36■□□□□ 0.69
PRPF19-203ENST00000539180 VAMP4O75379 141 aa19.36■□□□□ 0.69
PRPF19-203ENST00000539180 SLFN5Q08AF3 891 aa19.36■□□□□ 0.69
PRPF19-203ENST00000539180 ZNF34Q8IZ26 560 aa19.36■□□□□ 0.69
PRPF19-203ENST00000539180 CHMP4AQ9BY43 222 aa19.36■□□□□ 0.69
PRPF19-203ENST00000539180 CACNA1SQ13698 1873 aa19.35■□□□□ 0.69
PRPF19-203ENST00000539180 DDX60Q8IY21 1712 aaKnown RBP19.35■□□□□ 0.69
PRPF19-203ENST00000539180 CNBD1Q8NA66 436 aa19.35■□□□□ 0.69
PRPF19-203ENST00000539180 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
PRPF19-203ENST00000539180 ABCC12Q96J65 1359 aa19.34■□□□□ 0.69
PRPF19-203ENST00000539180 AIMP1Q12904 312 aaKnown RBP19.34■□□□□ 0.69
PRPF19-203ENST00000539180 TRMT2AQ8IZ69 625 aaKnown RBP19.34■□□□□ 0.69
PRPF19-203ENST00000539180 PLBD2Q8NHP8 589 aa19.34■□□□□ 0.69
PRPF19-203ENST00000539180 CHD4Q14839 1912 aa19.33■□□□□ 0.69
PRPF19-203ENST00000539180 KCNA3P22001 575 aa19.33■□□□□ 0.68
PRPF19-203ENST00000539180 CDCA7LQ96GN5 454 aa19.33■□□□□ 0.68
PRPF19-203ENST00000539180 NTSR2O95665 410 aa19.32■□□□□ 0.68
PRPF19-203ENST00000539180 DPEP1P16444 411 aa19.32■□□□□ 0.68
PRPF19-203ENST00000539180 YBX3P16989 372 aaKnown RBP eCLIP19.32■□□□□ 0.689e-9■■■□□ 15.2
PRPF19-203ENST00000539180 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
PRPF19-203ENST00000539180 GPTP24298 496 aa19.31■□□□□ 0.68
PRPF19-203ENST00000539180 NBPF5PQ86XG9 351 aaPredicted RBP19.31■□□□□ 0.68
PRPF19-203ENST00000539180 BRIP1Q9BX63 1249 aa19.31■□□□□ 0.68
PRPF19-203ENST00000539180 STK31Q9BXU1 1019 aa19.31■□□□□ 0.68
PRPF19-203ENST00000539180 ADCY9O60503 1353 aa19.31■□□□□ 0.68
PRPF19-203ENST00000539180 A0A0G2JLW4 131 aa19.3■□□□□ 0.68
PRPF19-203ENST00000539180 TCERG1O14776 1098 aaKnown RBP19.3■□□□□ 0.68
PRPF19-203ENST00000539180 CHRNA5P30532 468 aa19.3■□□□□ 0.68
PRPF19-203ENST00000539180 ST5P78524 1137 aa19.3■□□□□ 0.68
PRPF19-203ENST00000539180 PARP10Q53GL7 1025 aa19.3■□□□□ 0.68
PRPF19-203ENST00000539180 ANKRD13DQ6ZTN6 518 aa19.3■□□□□ 0.68
PRPF19-203ENST00000539180 TCIRG1Q13488 830 aa19.29■□□□□ 0.68
PRPF19-203ENST00000539180 SUSD4Q5VX71 490 aa19.29■□□□□ 0.68
PRPF19-203ENST00000539180 G2E3Q7L622 706 aa19.29■□□□□ 0.68
PRPF19-203ENST00000539180 CCDC24Q8N4L8 307 aa19.29■□□□□ 0.68
PRPF19-203ENST00000539180 ISCA1Q9BUE6 129 aa19.29■□□□□ 0.68
PRPF19-203ENST00000539180 GOLGB1Q14789 3259 aaKnown RBP19.29■□□□□ 0.68
PRPF19-203ENST00000539180 RNF123Q5XPI4 1314 aa19.28■□□□□ 0.68
PRPF19-203ENST00000539180 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
PRPF19-203ENST00000539180 TPTE2Q6XPS3 522 aa19.28■□□□□ 0.68
PRPF19-203ENST00000539180 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
PRPF19-203ENST00000539180 NYXQ9GZU5 481 aa19.28■□□□□ 0.68
PRPF19-203ENST00000539180 UTRNP46939 3433 aa19.27■□□□□ 0.68
PRPF19-203ENST00000539180 KLRG2A4D1S0 409 aaPredicted RBP19.27■□□□□ 0.68
PRPF19-203ENST00000539180 SLC4A2P04920 1241 aa19.27■□□□□ 0.68
PRPF19-203ENST00000539180 PDZRN3Q9UPQ7 1066 aa19.27■□□□□ 0.68
PRPF19-203ENST00000539180 ZBED9Q6R2W3 1325 aa19.26■□□□□ 0.67
PRPF19-203ENST00000539180 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
PRPF19-203ENST00000539180 PDE6BP35913 854 aa19.26■□□□□ 0.67
PRPF19-203ENST00000539180 FLIIQ13045 1269 aa19.26■□□□□ 0.67
PRPF19-203ENST00000539180 GPR162Q16538 588 aa19.26■□□□□ 0.67
PRPF19-203ENST00000539180 NUTM1Q86Y26 1132 aa19.26■□□□□ 0.67
PRPF19-203ENST00000539180 SLX4Q8IY92 1834 aa19.25■□□□□ 0.67
PRPF19-203ENST00000539180 DDX58O95786 925 aaKnown RBP19.25■□□□□ 0.67
PRPF19-203ENST00000539180 TRIM28Q13263 835 aaKnown RBP19.25■□□□□ 0.67
PRPF19-203ENST00000539180 ERFEQ4G0M1 354 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms