RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	LRP10	Q7Z4F1	713 aa		16.03	■□□□□ 0.16
CLTCL1-205	ENST00000538828	ATP10D	Q9P241	1426 aa		16.02	■□□□□ 0.16
CLTCL1-205	ENST00000538828	PDE6B	P35913	854 aa		16.02	■□□□□ 0.16
CLTCL1-205	ENST00000538828	DDX21	Q9NR30	783 aa	Known RBP eCLIP	16.02	■□□□□ 0.16
CLTCL1-205	ENST00000538828	DLEC1	Q9Y238	1755 aa		16.02	■□□□□ 0.15
CLTCL1-205	ENST00000538828	IBTK	Q9P2D0	1353 aa	Predicted RBP	16.01	■□□□□ 0.15
CLTCL1-205	ENST00000538828	IL16	Q14005	1332 aa		16.01	■□□□□ 0.15
CLTCL1-205	ENST00000538828	PIP4K2A	P48426	406 aa	Predicted RBP	16.01	■□□□□ 0.15
CLTCL1-205	ENST00000538828	DALRD3	Q5D0E6	543 aa	Known RBP	16.01	■□□□□ 0.15
CLTCL1-205	ENST00000538828	PRR5L	Q6MZQ0	368 aa		16.01	■□□□□ 0.15
CLTCL1-205	ENST00000538828	TPTE2	Q6XPS3	522 aa		16.01	■□□□□ 0.15
CLTCL1-205	ENST00000538828	KIF6	Q6ZMV9	814 aa		16.01	■□□□□ 0.15
CLTCL1-205	ENST00000538828	CNBD1	Q8NA66	436 aa		16.01	■□□□□ 0.15
CLTCL1-205	ENST00000538828	NUP98	P52948	1817 aa		16.01	■□□□□ 0.15
CLTCL1-205	ENST00000538828		H0YIN7	160 aa		16	■□□□□ 0.15
CLTCL1-205	ENST00000538828	ST5	P78524	1137 aa		16	■□□□□ 0.15
CLTCL1-205	ENST00000538828	GIGYF2	Q6Y7W6	1299 aa	Known RBP	16	■□□□□ 0.15
CLTCL1-205	ENST00000538828	BICDL1	Q6ZP65	573 aa		16	■□□□□ 0.15
CLTCL1-205	ENST00000538828	MBIP	Q9NS73	344 aa		16	■□□□□ 0.15
CLTCL1-205	ENST00000538828	BCS1L	Q9Y276	419 aa		16	■□□□□ 0.15
CLTCL1-205	ENST00000538828	KLRG2	A4D1S0	409 aa	Predicted RBP	15.99	■□□□□ 0.15
CLTCL1-205	ENST00000538828	NYX	Q9GZU5	481 aa		15.99	■□□□□ 0.15
CLTCL1-205	ENST00000538828	NIP7	Q9Y221	180 aa	Known RBP eCLIP	15.99	■□□□□ 0.15
CLTCL1-205	ENST00000538828	ANKRD31	Q8N7Z5	1873 aa		15.99	■□□□□ 0.15
CLTCL1-205	ENST00000538828	EIF2S2	P20042	333 aa	Known RBP	15.98	■□□□□ 0.15
CLTCL1-205	ENST00000538828	RIC1	Q4ADV7	1423 aa		15.98	■□□□□ 0.15
CLTCL1-205	ENST00000538828	PARP10	Q53GL7	1025 aa		15.98	■□□□□ 0.15
CLTCL1-205	ENST00000538828	NBPF5P	Q86XG9	351 aa	Predicted RBP	15.98	■□□□□ 0.15
CLTCL1-205	ENST00000538828	WWC1	Q8IX03	1113 aa		15.98	■□□□□ 0.15
CLTCL1-205	ENST00000538828	TTLL6	Q8N841	843 aa		15.98	■□□□□ 0.15
CLTCL1-205	ENST00000538828	DBF4	Q9UBU7	674 aa	Predicted RBP	15.98	■□□□□ 0.15
CLTCL1-205	ENST00000538828	LAS1L	Q9Y4W2	734 aa	Known RBP	15.98	■□□□□ 0.15
CLTCL1-205	ENST00000538828	RNF123	Q5XPI4	1314 aa		15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	MYL6B	P14649	208 aa		15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	CHRNA5	P30532	468 aa		15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	HLF	Q16534	295 aa		15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	HSP90AB3P	Q58FF7	597 aa		15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	DUSP27	Q5VZP5	1158 aa		15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	TTLL7	Q6ZT98	887 aa		15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	WDR63	Q8IWG1	891 aa		15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	ZNF784	Q8NCA9	323 aa	Predicted RBP	15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	ADCY9	O60503	1353 aa		15.97	■□□□□ 0.15
CLTCL1-205	ENST00000538828	HDGFL1	Q5TGJ6	251 aa		15.96	■□□□□ 0.15
CLTCL1-205	ENST00000538828	STYK1	Q6J9G0	422 aa		15.96	■□□□□ 0.15
CLTCL1-205	ENST00000538828	C2CD5	Q86YS7	1000 aa		15.96	■□□□□ 0.15
CLTCL1-205	ENST00000538828	ZNF34	Q8IZ26	560 aa		15.96	■□□□□ 0.15
CLTCL1-205	ENST00000538828	HYPK	Q9NX55	129 aa		15.96	■□□□□ 0.15
CLTCL1-205	ENST00000538828	NPHP1	O15259	732 aa		15.95	■□□□□ 0.14
CLTCL1-205	ENST00000538828	SRGN	P10124	158 aa		15.95	■□□□□ 0.14
CLTCL1-205	ENST00000538828	CNKSR1	Q969H4	720 aa		15.95	■□□□□ 0.14
CLTCL1-205	ENST00000538828	KRT24	Q2M2I5	525 aa		15.94	■□□□□ 0.14
CLTCL1-205	ENST00000538828	COPS6	Q7L5N1	327 aa		15.94	■□□□□ 0.14
CLTCL1-205	ENST00000538828	PPP1R42	Q7Z4L9	355 aa		15.94	■□□□□ 0.14
CLTCL1-205	ENST00000538828	MASTL	Q96GX5	879 aa		15.94	■□□□□ 0.14
CLTCL1-205	ENST00000538828	PROSER3	Q2NL68	480 aa		15.93	■□□□□ 0.14
CLTCL1-205	ENST00000538828	SOGA3	Q5TF21	947 aa		15.93	■□□□□ 0.14
CLTCL1-205	ENST00000538828	PLBD2	Q8NHP8	589 aa		15.93	■□□□□ 0.14
CLTCL1-205	ENST00000538828	ZC3H4	Q9UPT8	1303 aa	Known RBP	15.93	■□□□□ 0.14
CLTCL1-205	ENST00000538828	ARFGEF2	Q9Y6D5	1785 aa		15.92	■□□□□ 0.14
CLTCL1-205	ENST00000538828	NPR1	P16066	1061 aa		15.92	■□□□□ 0.14
CLTCL1-205	ENST00000538828	CRY2	Q49AN0	593 aa		15.92	■□□□□ 0.14
CLTCL1-205	ENST00000538828	ARHGAP27	Q6ZUM4	889 aa		15.92	■□□□□ 0.14
CLTCL1-205	ENST00000538828	XAGE3	Q8WTP9	111 aa		15.92	■□□□□ 0.14
CLTCL1-205	ENST00000538828	ZBTB3	Q9H5J0	574 aa		15.92	■□□□□ 0.14
CLTCL1-205	ENST00000538828	CHPF2	Q9P2E5	772 aa		15.92	■□□□□ 0.14
CLTCL1-205	ENST00000538828	ANKRD36C	Q5JPF3	1778 aa		15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	CCER2	I3L3R5	266 aa		15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	GTF2E1	P29083	439 aa	Predicted RBP	15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	TRIM28	Q13263	835 aa	Known RBP	15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	TCIRG1	Q13488	830 aa		15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	SLC10A5	Q5PT55	438 aa		15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	CCDC30	Q5VVM6	783 aa		15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	CACNA1F	O60840	1977 aa		15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	UBN2	Q6ZU65	1347 aa		15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	LTBP3	Q9NS15	1303 aa		15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	COL11A2	P13942	1736 aa	Predicted RBP	15.91	■□□□□ 0.14
CLTCL1-205	ENST00000538828	NTSR2	O95665	410 aa		15.9	■□□□□ 0.14
CLTCL1-205	ENST00000538828	ALDH1B1	P30837	517 aa		15.9	■□□□□ 0.14
CLTCL1-205	ENST00000538828	ANKRD13D	Q6ZTN6	518 aa		15.9	■□□□□ 0.14
CLTCL1-205	ENST00000538828	SBF1	O95248	1867 aa		15.9	■□□□□ 0.14
CLTCL1-205	ENST00000538828	ANXA1	P04083	346 aa		15.89	■□□□□ 0.13
CLTCL1-205	ENST00000538828	SUSD4	Q5VX71	490 aa		15.89	■□□□□ 0.13
CLTCL1-205	ENST00000538828	C8orf58	Q8NAV2	365 aa		15.89	■□□□□ 0.13
CLTCL1-205	ENST00000538828	ZNF622	Q969S3	477 aa	Known RBP eCLIP	15.89	■□□□□ 0.13
CLTCL1-205	ENST00000538828	WWC3	Q9ULE0	1092 aa		15.89	■□□□□ 0.13
CLTCL1-205	ENST00000538828	HOXA10	P31260	410 aa	Predicted RBP	15.88	■□□□□ 0.13
CLTCL1-205	ENST00000538828	GRIPAP1	Q4V328	841 aa		15.88	■□□□□ 0.13
CLTCL1-205	ENST00000538828	FAM9B	Q8IZU0	186 aa		15.88	■□□□□ 0.13
CLTCL1-205	ENST00000538828	NECTIN2	Q92692	538 aa		15.88	■□□□□ 0.13
CLTCL1-205	ENST00000538828	UTP14A	Q9BVJ6	771 aa	Known RBP	15.88	■□□□□ 0.13
CLTCL1-205	ENST00000538828	FER1L6	Q2WGJ9	1857 aa		15.87	■□□□□ 0.13
CLTCL1-205	ENST00000538828	GPT	P24298	496 aa		15.87	■□□□□ 0.13
CLTCL1-205	ENST00000538828	AIMP1	Q12904	312 aa	Known RBP	15.87	■□□□□ 0.13
CLTCL1-205	ENST00000538828	NLRP10	Q86W26	655 aa		15.87	■□□□□ 0.13
CLTCL1-205	ENST00000538828	C7orf43	Q8WVR3	580 aa		15.87	■□□□□ 0.13
CLTCL1-205	ENST00000538828	ISCA1	Q9BUE6	129 aa		15.87	■□□□□ 0.13
CLTCL1-205	ENST00000538828	LMNB1	P20700	586 aa		15.86	■□□□□ 0.13
CLTCL1-205	ENST00000538828	GOLGA2	Q08379	1002 aa		15.86	■□□□□ 0.13
CLTCL1-205	ENST00000538828	ERFE	Q4G0M1	354 aa		15.86	■□□□□ 0.13
CLTCL1-205	ENST00000538828	CC2D2B	Q6DHV5	1058 aa		15.86	■□□□□ 0.13

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