RNA–Protein interactions for RNA: ENST00000538045.5

MSRB3-207, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-207ENST00000538045 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
MSRB3-207ENST00000538045 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
MSRB3-207ENST00000538045 NECTIN2Q92692 538 aa17.18■□□□□ 0.34
MSRB3-207ENST00000538045 CARMIL3Q8ND23 1372 aa17.17■□□□□ 0.34
MSRB3-207ENST00000538045 RGL2O15211 777 aa17.17■□□□□ 0.34
MSRB3-207ENST00000538045 ERVV-1B6SEH8 477 aa17.16■□□□□ 0.34
MSRB3-207ENST00000538045 ANXA1P04083 346 aa17.16■□□□□ 0.34
MSRB3-207ENST00000538045 CHRNA5P30532 468 aa17.16■□□□□ 0.34
MSRB3-207ENST00000538045 PROSER3Q2NL68 480 aa17.16■□□□□ 0.34
MSRB3-207ENST00000538045 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
MSRB3-207ENST00000538045 KIF6Q6ZMV9 814 aa17.16■□□□□ 0.34
MSRB3-207ENST00000538045 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
MSRB3-207ENST00000538045 PIM2Q9P1W9 311 aa17.16■□□□□ 0.34
MSRB3-207ENST00000538045 NIP7Q9Y221 180 aaKnown RBP eCLIP17.16■□□□□ 0.34
MSRB3-207ENST00000538045 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
MSRB3-207ENST00000538045 MAP3K15Q6ZN16 1313 aa17.16■□□□□ 0.34
MSRB3-207ENST00000538045 HOXB7P09629 217 aa17.15■□□□□ 0.34
MSRB3-207ENST00000538045 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
MSRB3-207ENST00000538045 PRR5LQ6MZQ0 368 aa17.15■□□□□ 0.34
MSRB3-207ENST00000538045 LRP10Q7Z4F1 713 aa17.15■□□□□ 0.34
MSRB3-207ENST00000538045 CCDC24Q8N4L8 307 aa17.15■□□□□ 0.34
MSRB3-207ENST00000538045 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
MSRB3-207ENST00000538045 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
MSRB3-207ENST00000538045 NPHP1O15259 732 aa17.14■□□□□ 0.33
MSRB3-207ENST00000538045 ZBTB3Q9H5J0 574 aa17.14■□□□□ 0.33
MSRB3-207ENST00000538045 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
MSRB3-207ENST00000538045 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
MSRB3-207ENST00000538045 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
MSRB3-207ENST00000538045 C2CD5Q86YS7 1000 aa17.13■□□□□ 0.33
MSRB3-207ENST00000538045 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
MSRB3-207ENST00000538045 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
MSRB3-207ENST00000538045 ARFGEF1Q9Y6D6 1849 aa17.12■□□□□ 0.33
MSRB3-207ENST00000538045 H0YIN7 160 aa17.12■□□□□ 0.33
MSRB3-207ENST00000538045 ELL2O00472 640 aaPredicted RBP17.12■□□□□ 0.33
MSRB3-207ENST00000538045 ST5P78524 1137 aa17.12■□□□□ 0.33
MSRB3-207ENST00000538045 DALRD3Q5D0E6 543 aaKnown RBP17.12■□□□□ 0.33
MSRB3-207ENST00000538045 COPS6Q7L5N1 327 aa17.12■□□□□ 0.33
MSRB3-207ENST00000538045 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
MSRB3-207ENST00000538045 DLEC1Q9Y238 1755 aa17.11■□□□□ 0.33
MSRB3-207ENST00000538045 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
MSRB3-207ENST00000538045 PDE6BP35913 854 aa17.11■□□□□ 0.33
MSRB3-207ENST00000538045 AIMP1Q12904 312 aaKnown RBP17.11■□□□□ 0.33
MSRB3-207ENST00000538045 TPTE2Q6XPS3 522 aa17.11■□□□□ 0.33
MSRB3-207ENST00000538045 GIGYF2Q6Y7W6 1299 aaKnown RBP17.11■□□□□ 0.33
MSRB3-207ENST00000538045 C8orf58Q8NAV2 365 aa17.11■□□□□ 0.33
MSRB3-207ENST00000538045 XAGE3Q8WTP9 111 aa17.11■□□□□ 0.33
MSRB3-207ENST00000538045 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
MSRB3-207ENST00000538045 DBF4Q9UBU7 674 aaPredicted RBP17.1■□□□□ 0.33
MSRB3-207ENST00000538045 PDZRN3Q9UPQ7 1066 aa17.1■□□□□ 0.33
MSRB3-207ENST00000538045 IL16Q14005 1332 aa17.1■□□□□ 0.33
MSRB3-207ENST00000538045 GPTP24298 496 aa17.09■□□□□ 0.33
MSRB3-207ENST00000538045 ARHGAP27Q6ZUM4 889 aa17.09■□□□□ 0.33
MSRB3-207ENST00000538045 WDR63Q8IWG1 891 aa17.09■□□□□ 0.33
MSRB3-207ENST00000538045 ZNF34Q8IZ26 560 aa17.09■□□□□ 0.33
MSRB3-207ENST00000538045 ATP10DQ9P241 1426 aa17.08■□□□□ 0.32
MSRB3-207ENST00000538045 GTF2E1P29083 439 aaPredicted RBP17.08■□□□□ 0.32
MSRB3-207ENST00000538045 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
MSRB3-207ENST00000538045 ZNF622Q969S3 477 aaKnown RBP eCLIP17.08■□□□□ 0.32
MSRB3-207ENST00000538045 CCER2I3L3R5 266 aa17.07■□□□□ 0.32
MSRB3-207ENST00000538045 TTLL6Q8N841 843 aa17.07■□□□□ 0.32
MSRB3-207ENST00000538045 NYXQ9GZU5 481 aa17.07■□□□□ 0.32
MSRB3-207ENST00000538045 HYPKQ9NX55 129 aa17.07■□□□□ 0.32
MSRB3-207ENST00000538045 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
MSRB3-207ENST00000538045 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
MSRB3-207ENST00000538045 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
MSRB3-207ENST00000538045 ANKRD36CQ5JPF3 1778 aa17.05■□□□□ 0.32
MSRB3-207ENST00000538045 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
MSRB3-207ENST00000538045 CCDC30Q5VVM6 783 aa17.05■□□□□ 0.32
MSRB3-207ENST00000538045 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
MSRB3-207ENST00000538045 NUTM1Q86Y26 1132 aa17.05■□□□□ 0.32
MSRB3-207ENST00000538045 ZNF784Q8NCA9 323 aaPredicted RBP17.05■□□□□ 0.32
MSRB3-207ENST00000538045 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
MSRB3-207ENST00000538045 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
MSRB3-207ENST00000538045 SRGNP10124 158 aa17.04■□□□□ 0.32
MSRB3-207ENST00000538045 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
MSRB3-207ENST00000538045 TWISTNBQ3B726 338 aaPredicted RBP17.04■□□□□ 0.32
MSRB3-207ENST00000538045 ERFEQ4G0M1 354 aa17.04■□□□□ 0.32
MSRB3-207ENST00000538045 PARP10Q53GL7 1025 aa17.04■□□□□ 0.32
MSRB3-207ENST00000538045 PPP1R42Q7Z4L9 355 aa17.04■□□□□ 0.32
MSRB3-207ENST00000538045 PLBD2Q8NHP8 589 aa17.04■□□□□ 0.32
MSRB3-207ENST00000538045 MASTLQ96GX5 879 aa17.04■□□□□ 0.32
MSRB3-207ENST00000538045 FANCIQ9NVI1 1328 aa17.03■□□□□ 0.32
MSRB3-207ENST00000538045 KLRG2A4D1S0 409 aaPredicted RBP17.03■□□□□ 0.32
MSRB3-207ENST00000538045 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
MSRB3-207ENST00000538045 STYK1Q6J9G0 422 aa17.03■□□□□ 0.32
MSRB3-207ENST00000538045 CNKSR1Q969H4 720 aa17.03■□□□□ 0.32
MSRB3-207ENST00000538045 PHAXQ9H814 394 aaKnown RBP17.03■□□□□ 0.32
MSRB3-207ENST00000538045 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
MSRB3-207ENST00000538045 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.32
MSRB3-207ENST00000538045 SBF1O95248 1867 aa17.02■□□□□ 0.32
MSRB3-207ENST00000538045 NTSR2O95665 410 aa17.02■□□□□ 0.32
MSRB3-207ENST00000538045 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
MSRB3-207ENST00000538045 SLX4Q8IY92 1834 aa17.02■□□□□ 0.31
MSRB3-207ENST00000538045 NPR1P16066 1061 aa17.01■□□□□ 0.31
MSRB3-207ENST00000538045 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
MSRB3-207ENST00000538045 NLRP10Q86W26 655 aa17.01■□□□□ 0.31
MSRB3-207ENST00000538045 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
MSRB3-207ENST00000538045 ABCC12Q96J65 1359 aa17.01■□□□□ 0.31
MSRB3-207ENST00000538045 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
MSRB3-207ENST00000538045 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms