RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 TNFRSF10AO00220 468 aa7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 LZTS3O60299 673 aaPredicted RBP7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 NR3C2P08235 984 aa7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 DDX10Q13206 875 aaKnown RBP7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 GGT6Q6P531 493 aa7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 SNIP1Q8TAD8 396 aaKnown RBP7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 HIRIP3Q9BW71 556 aaPredicted RBP7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 CDCA7Q9BWT1 371 aaPredicted RBP7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 TOR4AQ9NXH8 423 aa7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 PCDHB11Q9Y5F2 797 aa7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 ERVK-7P63135 1459 aa7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 CLTCQ00610 1675 aaKnown RBP7.61□□□□□ -1.19
NPIPB3-208ENST00000537983 ALDH1A1P00352 501 aa7.61□□□□□ -1.19
NPIPB3-208ENST00000537983 RAB15P59190 212 aa7.61□□□□□ -1.19
NPIPB3-208ENST00000537983 RGL3Q3MIN7 710 aa7.61□□□□□ -1.19
NPIPB3-208ENST00000537983 ARXQ96QS3 562 aa7.61□□□□□ -1.19
NPIPB3-208ENST00000537983 SPATA31D1Q6ZQQ2 1576 aa7.61□□□□□ -1.19
NPIPB3-208ENST00000537983 SETBP1Q9Y6X0 1596 aa7.61□□□□□ -1.19
NPIPB3-208ENST00000537983 KIF7Q2M1P5 1343 aa7.6□□□□□ -1.19
NPIPB3-208ENST00000537983 CCDC116Q8IYX3 515 aa7.6□□□□□ -1.19
NPIPB3-208ENST00000537983 SCAF11Q99590 1463 aaKnown RBP7.6□□□□□ -1.19
NPIPB3-208ENST00000537983 MYO3AQ8NEV4 1616 aa7.6□□□□□ -1.19
NPIPB3-208ENST00000537983 RPGRIP1LQ68CZ1 1315 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 NEXMIFQ5QGS0 1516 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 J3QL48 77 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 ANP32CO43423 234 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 CENPBP07199 599 aaPredicted RBP7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 SMPD1P17405 629 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 DHX9Q08211 1270 aaKnown RBP7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 NNTQ13423 1086 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 EML3Q32P44 896 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 OXLD1Q5BKU9 147 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 PPP1R26Q5T8A7 1209 aaPredicted RBP7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 CYP4X1Q8N118 509 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 PIK3C2GO75747 1445 aa7.59□□□□□ -1.19
NPIPB3-208ENST00000537983 EIF3AQ14152 1382 aaKnown RBP7.59□□□□□ -1.2
NPIPB3-208ENST00000537983 TTC24A2A3L6 582 aaPredicted RBP7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 CCER2I3L3R5 266 aa7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 ATG7O95352 703 aa7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 SCTRP47872 440 aa7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 ERVK-9P63128 1117 aa7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 ZNF784Q8NCA9 323 aaPredicted RBP7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 VRTNQ9H8Y1 702 aa7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 TMPRSS4Q9NRS4 437 aa7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 MKRN1Q9UHC7 482 aaKnown RBP7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 TMEM131LA2VDJ0 1609 aa7.58□□□□□ -1.2
NPIPB3-208ENST00000537983 ATP5J2-PTCD1G3V325 749 aa7.57□□□□□ -1.2
NPIPB3-208ENST00000537983 LILRA1O75019 489 aa7.57□□□□□ -1.2
NPIPB3-208ENST00000537983 CDCA8Q53HL2 280 aa7.57□□□□□ -1.2
NPIPB3-208ENST00000537983 KLF16Q9BXK1 252 aaPredicted RBP7.57□□□□□ -1.2
NPIPB3-208ENST00000537983 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
NPIPB3-208ENST00000537983 NOD1Q9Y239 953 aa7.57□□□□□ -1.2
NPIPB3-208ENST00000537983 WASF2Q9Y6W5 498 aa7.57□□□□□ -1.2
NPIPB3-208ENST00000537983 ZFYVE9O95405 1425 aa7.57□□□□□ -1.2
NPIPB3-208ENST00000537983 KDM5AP29375 1690 aaKnown RBP7.57□□□□□ -1.2
NPIPB3-208ENST00000537983 CFAP65Q6ZU64 1925 aaKnown RBP7.56□□□□□ -1.2
NPIPB3-208ENST00000537983 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
NPIPB3-208ENST00000537983 FAM196BA6NMK8 535 aa7.56□□□□□ -1.2
NPIPB3-208ENST00000537983 C11orf95C9JLR9 678 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-208ENST00000537983 CRTC2Q53ET0 693 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-208ENST00000537983 CC2D2BQ6DHV5 1058 aa7.56□□□□□ -1.2
NPIPB3-208ENST00000537983 HOMEZQ8IX15 550 aa7.56□□□□□ -1.2
NPIPB3-208ENST00000537983 CYLDQ9NQC7 956 aa7.56□□□□□ -1.2
NPIPB3-208ENST00000537983 EMILIN1Q9Y6C2 1016 aa7.56□□□□□ -1.2
NPIPB3-208ENST00000537983 ADGRB1O14514 1584 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 MYO5BQ9ULV0 1848 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 CLDN10P78369 228 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 USP4Q13107 963 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 PTK7Q13308 1070 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 NBPF1Q3BBV0 1214 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 TRIM50Q86XT4 487 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 SIRT1Q96EB6 747 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 OSBPL3Q9H4L5 887 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 KIAA1024Q9UPX6 916 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 PCDHGA11Q9Y5H2 935 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L15C9J2P7 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L10C9JJH3 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L13C9JLJ4 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L12C9JPN9 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L11C9JVI0 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L21D6R901 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L18D6R9N7 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L22D6RA61 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L17D6RBQ6 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L19D6RCP7 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L20D6RJB6 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 DKK1O94907 266 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 MYCP01106 439 aaPredicted RBP7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 GTF2IP78347 998 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 MYT1Q01538 1121 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 USP17L24Q0WX57 530 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 ELOAQ14241 798 aaKnown RBP7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 OGFOD1Q8N543 542 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 RETREG2Q8NC44 543 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 PGPEP1Q9NXJ5 209 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 ZMIZ1Q9ULJ6 1067 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 PDZRN3Q9UPQ7 1066 aa7.54□□□□□ -1.2
NPIPB3-208ENST00000537983 ADGRF5Q8IZF2 1346 aa7.53□□□□□ -1.2
NPIPB3-208ENST00000537983 ZBTB7BO15156 539 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms