RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 TM4SF1P30408 202 aa14.81□□□□□ -0.04
SNHG1-206ENST00000537925 LRP10Q7Z4F1 713 aa14.81□□□□□ -0.04
SNHG1-206ENST00000537925 C8orf58Q8NAV2 365 aa14.81□□□□□ -0.04
SNHG1-206ENST00000537925 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
SNHG1-206ENST00000537925 MYL6BP14649 208 aa14.8□□□□□ -0.04
SNHG1-206ENST00000537925 FHDC1Q9C0D6 1143 aaPredicted RBP14.8□□□□□ -0.04
SNHG1-206ENST00000537925 RGL2O15211 777 aa14.79□□□□□ -0.04
SNHG1-206ENST00000537925 HDGFL1Q5TGJ6 251 aa14.79□□□□□ -0.04
SNHG1-206ENST00000537925 SYT17Q9BSW7 474 aa14.79□□□□□ -0.04
SNHG1-206ENST00000537925 DDX21Q9NR30 783 aaKnown RBP eCLIP14.79□□□□□ -0.041e-323■■■□□ 15.6
SNHG1-206ENST00000537925 N4BP2Q86UW6 1770 aaPredicted RBP14.78□□□□□ -0.04
SNHG1-206ENST00000537925 ELL2O00472 640 aaPredicted RBP14.78□□□□□ -0.04
SNHG1-206ENST00000537925 DDR1Q08345 913 aa14.78□□□□□ -0.04
SNHG1-206ENST00000537925 NFIXQ14938 502 aa14.78□□□□□ -0.04
SNHG1-206ENST00000537925 PROSER3Q2NL68 480 aa14.78□□□□□ -0.04
SNHG1-206ENST00000537925 TSPYL6Q8N831 410 aa14.78□□□□□ -0.04
SNHG1-206ENST00000537925 NECTIN2Q92692 538 aa14.78□□□□□ -0.04
SNHG1-206ENST00000537925 PARP3Q9Y6F1 533 aa14.78□□□□□ -0.04
SNHG1-206ENST00000537925 ARFGEF2Q9Y6D5 1785 aa14.78□□□□□ -0.04
SNHG1-206ENST00000537925 BRCA1P38398 1863 aaKnown RBP14.78□□□□□ -0.04
SNHG1-206ENST00000537925 POLRMTO00411 1230 aaKnown RBP14.77□□□□□ -0.04
SNHG1-206ENST00000537925 ANXA1P04083 346 aa14.77□□□□□ -0.04
SNHG1-206ENST00000537925 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.04
SNHG1-206ENST00000537925 TTLL7Q6ZT98 887 aa14.77□□□□□ -0.04
SNHG1-206ENST00000537925 CHPF2Q9P2E5 772 aa14.77□□□□□ -0.04
SNHG1-206ENST00000537925 ANKRD31Q8N7Z5 1873 aa14.77□□□□□ -0.04
SNHG1-206ENST00000537925 MAP3K15Q6ZN16 1313 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 GOLGA2Q08379 1002 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 TBC1D9BQ66K14 1250 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 MYH16Q9H6N6 1097 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 DBF4Q9UBU7 674 aaPredicted RBP14.76□□□□□ -0.05
SNHG1-206ENST00000537925 CD2APQ9Y5K6 639 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 C10orf71Q711Q0 1435 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 ERVV-1B6SEH8 477 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 TWISTNBQ3B726 338 aaPredicted RBP14.76□□□□□ -0.05
SNHG1-206ENST00000537925 B4GALNT3Q6L9W6 998 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 CHMP4AQ9BY43 222 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 ZNF652Q9Y2D9 606 aa14.76□□□□□ -0.05
SNHG1-206ENST00000537925 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
SNHG1-206ENST00000537925 EXOSC9Q06265 439 aaKnown RBP14.75□□□□□ -0.05
SNHG1-206ENST00000537925 HLFQ16534 295 aa14.75□□□□□ -0.05
SNHG1-206ENST00000537925 KIF6Q6ZMV9 814 aa14.75□□□□□ -0.05
SNHG1-206ENST00000537925 DLEC1Q9Y238 1755 aa14.75□□□□□ -0.05
SNHG1-206ENST00000537925 CCDC30Q5VVM6 783 aa14.74□□□□□ -0.05
SNHG1-206ENST00000537925 COPS6Q7L5N1 327 aa14.74□□□□□ -0.05
SNHG1-206ENST00000537925 KLHL34Q8N239 644 aa14.74□□□□□ -0.05
SNHG1-206ENST00000537925 HYPKQ9NX55 129 aa14.74□□□□□ -0.05
SNHG1-206ENST00000537925 ATP10DQ9P241 1426 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 CARMIL3Q8ND23 1372 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 E9PSI1 815 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 SERPINB2P05120 415 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 RRP1P56182 461 aaKnown RBP14.73□□□□□ -0.05
SNHG1-206ENST00000537925 SLFN5Q08AF3 891 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 BICDL1Q6ZP65 573 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 NLGN2Q8NFZ4 835 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 XAGE3Q8WTP9 111 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 SETDB2Q96T68 719 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 ZBTB3Q9H5J0 574 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 UTRNP46939 3433 aa14.73□□□□□ -0.05
SNHG1-206ENST00000537925 VAMP4O75379 141 aa14.72□□□□□ -0.05
SNHG1-206ENST00000537925 GIGYF2Q6Y7W6 1299 aaKnown RBP14.72□□□□□ -0.05
SNHG1-206ENST00000537925 TRMT2AQ8IZ69 625 aaKnown RBP14.72□□□□□ -0.05
SNHG1-206ENST00000537925 AIMP1Q12904 312 aaKnown RBP14.71□□□□□ -0.05
SNHG1-206ENST00000537925 CDCA7LQ96GN5 454 aa14.71□□□□□ -0.05
SNHG1-206ENST00000537925 RCAN3Q9UKA8 241 aa14.71□□□□□ -0.05
SNHG1-206ENST00000537925 ARFGEF1Q9Y6D6 1849 aa14.71□□□□□ -0.06
SNHG1-206ENST00000537925 PXDNLA1KZ92 1463 aa14.7□□□□□ -0.06
SNHG1-206ENST00000537925 CCDC136Q96JN2 1154 aa14.7□□□□□ -0.06
SNHG1-206ENST00000537925 PHAXQ9H814 394 aaKnown RBP14.7□□□□□ -0.06
SNHG1-206ENST00000537925 NIP7Q9Y221 180 aaKnown RBP eCLIP14.7□□□□□ -0.064e-44■■■■■ 26.8
SNHG1-206ENST00000537925 COL11A2P13942 1736 aaPredicted RBP14.7□□□□□ -0.06
SNHG1-206ENST00000537925 TGFB2P61812 414 aa14.69□□□□□ -0.06
SNHG1-206ENST00000537925 CACNA1SQ13698 1873 aa14.69□□□□□ -0.06
SNHG1-206ENST00000537925 ZNF34Q8IZ26 560 aa14.69□□□□□ -0.06
SNHG1-206ENST00000537925 PRR5LQ6MZQ0 368 aa14.69□□□□□ -0.06
SNHG1-206ENST00000537925 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
SNHG1-206ENST00000537925 PLBD2Q8NHP8 589 aa14.69□□□□□ -0.06
SNHG1-206ENST00000537925 STK31Q9BXU1 1019 aa14.69□□□□□ -0.06
SNHG1-206ENST00000537925 CHD4Q14839 1912 aa14.69□□□□□ -0.06
SNHG1-206ENST00000537925 UBN2Q6ZU65 1347 aa14.68□□□□□ -0.06
SNHG1-206ENST00000537925 LAMB2P55268 1798 aa14.68□□□□□ -0.06
SNHG1-206ENST00000537925 TCERG1O14776 1098 aaKnown RBP14.68□□□□□ -0.06
SNHG1-206ENST00000537925 SLC4A2P04920 1241 aa14.67□□□□□ -0.06
SNHG1-206ENST00000537925 HSP90AB3PQ58FF7 597 aa14.67□□□□□ -0.06
SNHG1-206ENST00000537925 NBPF5PQ86XG9 351 aaPredicted RBP14.67□□□□□ -0.06
SNHG1-206ENST00000537925 CNBD1Q8NA66 436 aa14.67□□□□□ -0.06
SNHG1-206ENST00000537925 IBTKQ9P2D0 1353 aaPredicted RBP14.67□□□□□ -0.06
SNHG1-206ENST00000537925 TNRC6CQ9HCJ0 1690 aaKnown RBP14.67□□□□□ -0.06
SNHG1-206ENST00000537925 GPTP24298 496 aa14.66□□□□□ -0.06
SNHG1-206ENST00000537925 TCIRG1Q13488 830 aa14.66□□□□□ -0.06
SNHG1-206ENST00000537925 TPTE2Q6XPS3 522 aa14.66□□□□□ -0.06
SNHG1-206ENST00000537925 BRIP1Q9BX63 1249 aa14.66□□□□□ -0.06
SNHG1-206ENST00000537925 DDX60Q8IY21 1712 aaKnown RBP14.66□□□□□ -0.06
SNHG1-206ENST00000537925 A0A0G2JLW4 131 aa14.65□□□□□ -0.06
SNHG1-206ENST00000537925 DPEP1P16444 411 aa14.65□□□□□ -0.06
SNHG1-206ENST00000537925 KCNA3P22001 575 aa14.65□□□□□ -0.06
SNHG1-206ENST00000537925 PARP10Q53GL7 1025 aa14.65□□□□□ -0.06
SNHG1-206ENST00000537925 G2E3Q7L622 706 aa14.65□□□□□ -0.06
SNHG1-206ENST00000537925 DDX58O95786 925 aaKnown RBP14.64□□□□□ -0.07
SNHG1-206ENST00000537925 ST5P78524 1137 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms