RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 PARP3Q9Y6F1 533 aa14.88□□□□□ -0.03
RFX4-205ENST00000536722 CARMIL3Q8ND23 1372 aa14.87□□□□□ -0.03
RFX4-205ENST00000536722 WWC1Q8IX03 1113 aa14.87□□□□□ -0.03
RFX4-205ENST00000536722 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
RFX4-205ENST00000536722 COL11A2P13942 1736 aaPredicted RBP14.86□□□□□ -0.03
RFX4-205ENST00000536722 ANXA1P04083 346 aa14.86□□□□□ -0.03
RFX4-205ENST00000536722 KCNA3P22001 575 aa14.86□□□□□ -0.03
RFX4-205ENST00000536722 HLFQ16534 295 aa14.86□□□□□ -0.03
RFX4-205ENST00000536722 TTLL7Q6ZT98 887 aa14.86□□□□□ -0.03
RFX4-205ENST00000536722 ERBB4Q15303 1308 aa14.86□□□□□ -0.03
RFX4-205ENST00000536722 ARFGEF1Q9Y6D6 1849 aa14.85□□□□□ -0.03
RFX4-205ENST00000536722 MYL6BP14649 208 aa14.85□□□□□ -0.03
RFX4-205ENST00000536722 EIF2S2P20042 333 aaKnown RBP14.85□□□□□ -0.03
RFX4-205ENST00000536722 BICDL1Q6ZP65 573 aa14.85□□□□□ -0.03
RFX4-205ENST00000536722 ANKRD36CQ5JPF3 1778 aa14.85□□□□□ -0.03
RFX4-205ENST00000536722 SERPINB2P05120 415 aa14.84□□□□□ -0.03
RFX4-205ENST00000536722 GNAI1P63096 354 aa14.84□□□□□ -0.03
RFX4-205ENST00000536722 NGEFQ8N5V2 710 aa14.84□□□□□ -0.03
RFX4-205ENST00000536722 NECTIN2Q92692 538 aa14.84□□□□□ -0.03
RFX4-205ENST00000536722 WWC3Q9ULE0 1092 aa14.84□□□□□ -0.03
RFX4-205ENST00000536722 A0A0G2JLW4 131 aa14.83□□□□□ -0.04
RFX4-205ENST00000536722 HOXB7P09629 217 aa14.83□□□□□ -0.04
RFX4-205ENST00000536722 DPEP1P16444 411 aa14.83□□□□□ -0.04
RFX4-205ENST00000536722 TGFB2P61812 414 aa14.83□□□□□ -0.04
RFX4-205ENST00000536722 DUSP27Q5VZP5 1158 aa14.83□□□□□ -0.04
RFX4-205ENST00000536722 CLEC4GQ6UXB4 293 aa14.83□□□□□ -0.04
RFX4-205ENST00000536722 C8orf58Q8NAV2 365 aa14.83□□□□□ -0.04
RFX4-205ENST00000536722 TSR2Q969E8 191 aaKnown RBP14.83□□□□□ -0.04
RFX4-205ENST00000536722 MAP3K15Q6ZN16 1313 aa14.83□□□□□ -0.04
RFX4-205ENST00000536722 RGL2O15211 777 aa14.82□□□□□ -0.04
RFX4-205ENST00000536722 CALD1Q05682 793 aaKnown RBP14.82□□□□□ -0.04
RFX4-205ENST00000536722 GPR162Q16538 588 aa14.82□□□□□ -0.04
RFX4-205ENST00000536722 PRR5LQ6MZQ0 368 aa14.82□□□□□ -0.04
RFX4-205ENST00000536722 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
RFX4-205ENST00000536722 SALL2Q9Y467 1007 aaPredicted RBP14.82□□□□□ -0.04
RFX4-205ENST00000536722 TNRC6CQ9HCJ0 1690 aaKnown RBP14.81□□□□□ -0.04
RFX4-205ENST00000536722 CHRNA5P30532 468 aa14.81□□□□□ -0.04
RFX4-205ENST00000536722 CCDC24Q8N4L8 307 aa14.81□□□□□ -0.04
RFX4-205ENST00000536722 TSPYL6Q8N831 410 aa14.81□□□□□ -0.04
RFX4-205ENST00000536722 CHPF2Q9P2E5 772 aa14.81□□□□□ -0.04
RFX4-205ENST00000536722 IL16Q14005 1332 aa14.81□□□□□ -0.04
RFX4-205ENST00000536722 ZNF521Q96K83 1311 aa14.81□□□□□ -0.04
RFX4-205ENST00000536722 ATP10DQ9P241 1426 aa14.81□□□□□ -0.04
RFX4-205ENST00000536722 ARFGEF2Q9Y6D5 1785 aa14.8□□□□□ -0.04
RFX4-205ENST00000536722 CACNA1SQ13698 1873 aa14.8□□□□□ -0.04
RFX4-205ENST00000536722 ERVV-1B6SEH8 477 aa14.8□□□□□ -0.04
RFX4-205ENST00000536722 CCER2I3L3R5 266 aa14.8□□□□□ -0.04
RFX4-205ENST00000536722 HDGFL1Q5TGJ6 251 aa14.8□□□□□ -0.04
RFX4-205ENST00000536722 NPM2Q86SE8 214 aaKnown RBP14.8□□□□□ -0.04
RFX4-205ENST00000536722 PELP1Q8IZL8 1130 aaKnown RBP14.8□□□□□ -0.04
RFX4-205ENST00000536722 ZBTB3Q9H5J0 574 aa14.8□□□□□ -0.04
RFX4-205ENST00000536722 DDX21Q9NR30 783 aaKnown RBP eCLIP14.8□□□□□ -0.04
RFX4-205ENST00000536722 ELL2O00472 640 aaPredicted RBP14.79□□□□□ -0.04
RFX4-205ENST00000536722 UBN2Q6ZU65 1347 aa14.79□□□□□ -0.04
RFX4-205ENST00000536722 XAGE3Q8WTP9 111 aa14.79□□□□□ -0.04
RFX4-205ENST00000536722 SETDB2Q96T68 719 aa14.79□□□□□ -0.04
RFX4-205ENST00000536722 CACNA1FO60840 1977 aa14.78□□□□□ -0.04
RFX4-205ENST00000536722 FANCIQ9NVI1 1328 aa14.78□□□□□ -0.04
RFX4-205ENST00000536722 CAPN15O75808 1086 aa14.78□□□□□ -0.04
RFX4-205ENST00000536722 COPS6Q7L5N1 327 aa14.78□□□□□ -0.04
RFX4-205ENST00000536722 WDR63Q8IWG1 891 aa14.78□□□□□ -0.04
RFX4-205ENST00000536722 NIP7Q9Y221 180 aaKnown RBP eCLIP14.78□□□□□ -0.04
RFX4-205ENST00000536722 ZNF652Q9Y2D9 606 aa14.78□□□□□ -0.04
RFX4-205ENST00000536722 DIEXFQ68CQ4 756 aaKnown RBP14.77□□□□□ -0.05
RFX4-205ENST00000536722 GIGYF2Q6Y7W6 1299 aaKnown RBP14.77□□□□□ -0.05
RFX4-205ENST00000536722 KIF6Q6ZMV9 814 aa14.77□□□□□ -0.05
RFX4-205ENST00000536722 ZNF34Q8IZ26 560 aa14.77□□□□□ -0.05
RFX4-205ENST00000536722 MIER1Q8N108 512 aa14.77□□□□□ -0.05
RFX4-205ENST00000536722 SBF1O95248 1867 aa14.77□□□□□ -0.05
RFX4-205ENST00000536722 SLX4Q8IY92 1834 aa14.77□□□□□ -0.05
RFX4-205ENST00000536722 ABCC12Q96J65 1359 aa14.76□□□□□ -0.05
RFX4-205ENST00000536722 LAMB2P55268 1798 aa14.76□□□□□ -0.05
RFX4-205ENST00000536722 CNBD1Q8NA66 436 aa14.76□□□□□ -0.05
RFX4-205ENST00000536722 BRIP1Q9BX63 1249 aa14.76□□□□□ -0.05
RFX4-205ENST00000536722 GPTP24298 496 aa14.75□□□□□ -0.05
RFX4-205ENST00000536722 AIMP1Q12904 312 aaKnown RBP14.75□□□□□ -0.05
RFX4-205ENST00000536722 NBPF5PQ86XG9 351 aaPredicted RBP14.75□□□□□ -0.05
RFX4-205ENST00000536722 ZNF219Q9P2Y4 722 aaPredicted RBP14.75□□□□□ -0.05
RFX4-205ENST00000536722 DBF4Q9UBU7 674 aaPredicted RBP14.75□□□□□ -0.05
RFX4-205ENST00000536722 BCS1LQ9Y276 419 aa14.75□□□□□ -0.05
RFX4-205ENST00000536722 IBTKQ9P2D0 1353 aaPredicted RBP14.74□□□□□ -0.05
RFX4-205ENST00000536722 FAM177BA6PVY3 158 aa14.74□□□□□ -0.05
RFX4-205ENST00000536722 GRIN3BO60391 1043 aa14.74□□□□□ -0.05
RFX4-205ENST00000536722 SUSD4Q5VX71 490 aa14.74□□□□□ -0.05
RFX4-205ENST00000536722 C2CD5Q86YS7 1000 aa14.74□□□□□ -0.05
RFX4-205ENST00000536722 PHAXQ9H814 394 aaKnown RBP14.74□□□□□ -0.05
RFX4-205ENST00000536722 PIM2Q9P1W9 311 aa14.74□□□□□ -0.05
RFX4-205ENST00000536722 CCDC88AQ3V6T2 1871 aa14.74□□□□□ -0.05
RFX4-205ENST00000536722 DDX60Q8IY21 1712 aaKnown RBP14.73□□□□□ -0.05
RFX4-205ENST00000536722 KLRG2A4D1S0 409 aaPredicted RBP14.73□□□□□ -0.05
RFX4-205ENST00000536722 NTSR2O95665 410 aa14.73□□□□□ -0.05
RFX4-205ENST00000536722 YY1P25490 414 aa14.73□□□□□ -0.05
RFX4-205ENST00000536722 NUTM1Q86Y26 1132 aa14.73□□□□□ -0.05
RFX4-205ENST00000536722 FER1L6Q2WGJ9 1857 aa14.73□□□□□ -0.05
RFX4-205ENST00000536722 RIC1Q4ADV7 1423 aa14.73□□□□□ -0.05
RFX4-205ENST00000536722 TWISTNBQ3B726 338 aaPredicted RBP14.72□□□□□ -0.05
RFX4-205ENST00000536722 HYPKQ9NX55 129 aa14.72□□□□□ -0.05
RFX4-205ENST00000536722 ADCY9O60503 1353 aa14.72□□□□□ -0.05
RFX4-205ENST00000536722 TCERG1O14776 1098 aaKnown RBP14.71□□□□□ -0.05
RFX4-205ENST00000536722 VAMP4O75379 141 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms