RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 CCDC24Q8N4L8 307 aa28.25■■■□□ 2.11
GSDMD-216ENST00000534602 ZNF622Q969S3 477 aaKnown RBP eCLIP28.25■■■□□ 2.11
GSDMD-216ENST00000534602 TSPYL4Q9UJ04 414 aa28.24■■■□□ 2.11
GSDMD-216ENST00000534602 ERBB4Q15303 1308 aa28.23■■■□□ 2.11
GSDMD-216ENST00000534602 ERVV-1B6SEH8 477 aa28.23■■■□□ 2.11
GSDMD-216ENST00000534602 WDR43Q15061 677 aaKnown RBP eCLIP28.23■■■□□ 2.11
GSDMD-216ENST00000534602 STYK1Q6J9G0 422 aa28.23■■■□□ 2.11
GSDMD-216ENST00000534602 TPTE2Q6XPS3 522 aa28.23■■■□□ 2.11
GSDMD-216ENST00000534602 NIP7Q9Y221 180 aaKnown RBP eCLIP28.23■■■□□ 2.11
GSDMD-216ENST00000534602 SRGNP10124 158 aa28.22■■■□□ 2.11
GSDMD-216ENST00000534602 LMNB1P20700 586 aa28.22■■■□□ 2.11
GSDMD-216ENST00000534602 CNKSR1Q969H4 720 aa28.22■■■□□ 2.11
GSDMD-216ENST00000534602 PRKRIP1Q9H875 184 aaPredicted RBP28.22■■■□□ 2.11
GSDMD-216ENST00000534602 COL11A2P13942 1736 aaPredicted RBP28.21■■■□□ 2.11
GSDMD-216ENST00000534602 RUNDC1Q96C34 613 aa28.21■■■□□ 2.11
GSDMD-216ENST00000534602 KDM2BQ8NHM5 1336 aa28.2■■■□□ 2.11
GSDMD-216ENST00000534602 RASSF7Q02833 373 aa28.2■■■□□ 2.1
GSDMD-216ENST00000534602 HLFQ16534 295 aa28.2■■■□□ 2.1
GSDMD-216ENST00000534602 MASTLQ96GX5 879 aa28.2■■■□□ 2.1
GSDMD-216ENST00000534602 RRP7AQ9Y3A4 280 aaKnown RBP28.2■■■□□ 2.1
GSDMD-216ENST00000534602 KLRG2A4D1S0 409 aaPredicted RBP28.19■■■□□ 2.1
GSDMD-216ENST00000534602 TOMM70O94826 608 aa28.19■■■□□ 2.1
GSDMD-216ENST00000534602 NMRK2Q9NPI5 230 aa28.19■■■□□ 2.1
GSDMD-216ENST00000534602 MAP3K15Q6ZN16 1313 aa28.18■■■□□ 2.1
GSDMD-216ENST00000534602 KIF6Q6ZMV9 814 aa28.18■■■□□ 2.1
GSDMD-216ENST00000534602 CCDC146Q8IYE0 955 aa28.18■■■□□ 2.1
GSDMD-216ENST00000534602 NFKBIEO00221 500 aa28.17■■■□□ 2.1
GSDMD-216ENST00000534602 HSPA6P17066 643 aa28.17■■■□□ 2.1
GSDMD-216ENST00000534602 NGEFQ8N5V2 710 aa28.17■■■□□ 2.1
GSDMD-216ENST00000534602 ADAMTS8Q9UP79 889 aa28.17■■■□□ 2.1
GSDMD-216ENST00000534602 C21orf2O43822 256 aa28.16■■■□□ 2.1
GSDMD-216ENST00000534602 MYL6BP14649 208 aa28.15■■■□□ 2.1
GSDMD-216ENST00000534602 PRELPP51888 382 aa28.15■■■□□ 2.1
GSDMD-216ENST00000534602 SOGA3Q5TF21 947 aa28.15■■■□□ 2.1
GSDMD-216ENST00000534602 NPR1P16066 1061 aa28.14■■■□□ 2.1
GSDMD-216ENST00000534602 PRPF40BQ6NWY9 871 aaKnown RBP28.14■■■□□ 2.1
GSDMD-216ENST00000534602 TTLL7Q6ZT98 887 aa28.14■■■□□ 2.1
GSDMD-216ENST00000534602 NYXQ9GZU5 481 aa28.14■■■□□ 2.1
GSDMD-216ENST00000534602 LTBP3Q9NS15 1303 aa28.14■■■□□ 2.09
GSDMD-216ENST00000534602 CEP350Q5VT06 3117 aa28.13■■■□□ 2.09
GSDMD-216ENST00000534602 CHL1O00533 1208 aa28.13■■■□□ 2.09
GSDMD-216ENST00000534602 NEUROD2Q15784 382 aa28.13■■■□□ 2.09
GSDMD-216ENST00000534602 TRIM35Q9UPQ4 493 aa28.13■■■□□ 2.09
GSDMD-216ENST00000534602 ARFGEF2Q9Y6D5 1785 aa28.13■■■□□ 2.09
GSDMD-216ENST00000534602 NUP98P52948 1817 aa28.13■■■□□ 2.09
GSDMD-216ENST00000534602 GTF2E1P29083 439 aaPredicted RBP28.12■■■□□ 2.09
GSDMD-216ENST00000534602 FER1L6Q2WGJ9 1857 aa28.12■■■□□ 2.09
GSDMD-216ENST00000534602 SLX4Q8IY92 1834 aa28.11■■■□□ 2.09
GSDMD-216ENST00000534602 ZEB1P37275 1124 aaPredicted RBP28.11■■■□□ 2.09
GSDMD-216ENST00000534602 PDIA6Q15084 440 aa28.11■■■□□ 2.09
GSDMD-216ENST00000534602 LRP10Q7Z4F1 713 aa28.11■■■□□ 2.09
GSDMD-216ENST00000534602 IBTKQ9P2D0 1353 aaPredicted RBP28.11■■■□□ 2.09
GSDMD-216ENST00000534602 GLTPD2A6NH11 291 aa28.1■■■□□ 2.09
GSDMD-216ENST00000534602 FAM177BA6PVY3 158 aa28.1■■■□□ 2.09
GSDMD-216ENST00000534602 RBM46Q8TBY0 533 aaKnown RBP28.1■■■□□ 2.09
GSDMD-216ENST00000534602 C7orf43Q8WVR3 580 aa28.1■■■□□ 2.09
GSDMD-216ENST00000534602 ZNF219Q9P2Y4 722 aaPredicted RBP28.1■■■□□ 2.09
GSDMD-216ENST00000534602 TNRC6CQ9HCJ0 1690 aaKnown RBP28.1■■■□□ 2.09
GSDMD-216ENST00000534602 EIF2S2P20042 333 aaKnown RBP28.09■■■□□ 2.09
GSDMD-216ENST00000534602 GIGYF2Q6Y7W6 1299 aaKnown RBP28.09■■■□□ 2.09
GSDMD-216ENST00000534602 C16orf71Q8IYS4 520 aaPredicted RBP28.09■■■□□ 2.09
GSDMD-216ENST00000534602 TAOK3Q9H2K8 898 aa28.09■■■□□ 2.09
GSDMD-216ENST00000534602 ZBTB3Q9H5J0 574 aa28.09■■■□□ 2.09
GSDMD-216ENST00000534602 CCDC88AQ3V6T2 1871 aa28.08■■■□□ 2.09
GSDMD-216ENST00000534602 ZNF34Q8IZ26 560 aa28.08■■■□□ 2.09
GSDMD-216ENST00000534602 RRAGCQ9HB90 399 aa28.08■■■□□ 2.09
GSDMD-216ENST00000534602 RIC1Q4ADV7 1423 aa28.07■■■□□ 2.08
GSDMD-216ENST00000534602 ALDH1B1P30837 517 aa28.06■■■□□ 2.08
GSDMD-216ENST00000534602 CRY2Q49AN0 593 aa28.06■■■□□ 2.08
GSDMD-216ENST00000534602 TIAM2Q8IVF5 1701 aa28.06■■■□□ 2.08
GSDMD-216ENST00000534602 CACNA1SQ13698 1873 aa28.05■■■□□ 2.08
GSDMD-216ENST00000534602 UBN2Q6ZU65 1347 aa28.05■■■□□ 2.08
GSDMD-216ENST00000534602 DICER1Q9UPY3 1922 aaKnown RBP28.05■■■□□ 2.08
GSDMD-216ENST00000534602 GPTP24298 496 aa28.04■■■□□ 2.08
GSDMD-216ENST00000534602 FSTL1Q12841 308 aa28.04■■■□□ 2.08
GSDMD-216ENST00000534602 PROSER3Q2NL68 480 aa28.04■■■□□ 2.08
GSDMD-216ENST00000534602 ERFEQ4G0M1 354 aa28.04■■■□□ 2.08
GSDMD-216ENST00000534602 PARP10Q53GL7 1025 aa28.04■■■□□ 2.08
GSDMD-216ENST00000534602 CCDC93Q567U6 631 aa28.04■■■□□ 2.08
GSDMD-216ENST00000534602 ABCC12Q96J65 1359 aa28.03■■■□□ 2.08
GSDMD-216ENST00000534602 HOXB7P09629 217 aa28.03■■■□□ 2.08
GSDMD-216ENST00000534602 VEGFAP15692 232 aaPredicted RBP28.03■■■□□ 2.08
GSDMD-216ENST00000534602 SUSD4Q5VX71 490 aa28.03■■■□□ 2.08
GSDMD-216ENST00000534602 DPY19L2Q6NUT2 758 aa28.03■■■□□ 2.08
GSDMD-216ENST00000534602 NUTM1Q86Y26 1132 aa28.03■■■□□ 2.08
GSDMD-216ENST00000534602 CFAP44Q96MT7 982 aa28.03■■■□□ 2.08
GSDMD-216ENST00000534602 LAS1LQ9Y4W2 734 aaKnown RBP28.03■■■□□ 2.08
GSDMD-216ENST00000534602 APLP1P51693 650 aa28.02■■■□□ 2.08
GSDMD-216ENST00000534602 PPP1R42Q7Z4L9 355 aa28.02■■■□□ 2.08
GSDMD-216ENST00000534602 DDX21Q9NR30 783 aaKnown RBP eCLIP28.02■■■□□ 2.08
GSDMD-216ENST00000534602 RTKN2Q8IZC4 609 aa28.01■■■□□ 2.07
GSDMD-216ENST00000534602 NTSR2O95665 410 aa28■■■□□ 2.07
GSDMD-216ENST00000534602 ANXA1P04083 346 aa28■■■□□ 2.07
GSDMD-216ENST00000534602 HOXA10P31260 410 aaPredicted RBP28■■■□□ 2.07
GSDMD-216ENST00000534602 COPS6Q7L5N1 327 aa28■■■□□ 2.07
GSDMD-216ENST00000534602 KRT24Q2M2I5 525 aa27.99■■■□□ 2.07
GSDMD-216ENST00000534602 HSP90AB3PQ58FF7 597 aa27.99■■■□□ 2.07
GSDMD-216ENST00000534602 APAF1O14727 1248 aa27.98■■■□□ 2.07
GSDMD-216ENST00000534602 FKBP4Q02790 459 aaKnown RBP eCLIP27.98■■■□□ 2.07
GSDMD-216ENST00000534602 CALD1Q05682 793 aaKnown RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms