RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	BRINP3	Q76B58	766 aa		7.54	□□□□□ -1.2
ECHDC1-223	ENST00000534442	ZNF526	Q8TF50	670 aa	Predicted RBP	7.54	□□□□□ -1.2
ECHDC1-223	ENST00000534442	C1QTNF2	Q9BXJ5	285 aa		7.54	□□□□□ -1.2
ECHDC1-223	ENST00000534442	TNS1	Q9HBL0	1735 aa	Known RBP	7.53	□□□□□ -1.2
ECHDC1-223	ENST00000534442	ATP5J2-PTCD1	G3V325	749 aa		7.53	□□□□□ -1.2
ECHDC1-223	ENST00000534442	SH3BP2	P78314	561 aa		7.53	□□□□□ -1.2
ECHDC1-223	ENST00000534442	CLDN10	P78369	228 aa		7.53	□□□□□ -1.2
ECHDC1-223	ENST00000534442	AGER	Q15109	404 aa		7.53	□□□□□ -1.2
ECHDC1-223	ENST00000534442	TMCO4	Q5TGY1	634 aa		7.53	□□□□□ -1.2
ECHDC1-223	ENST00000534442	PHLDB3	Q6NSJ2	640 aa		7.53	□□□□□ -1.2
ECHDC1-223	ENST00000534442	LARP1	Q6PKG0	1096 aa	Known RBP	7.53	□□□□□ -1.2
ECHDC1-223	ENST00000534442	MIA2	Q96PC5	1412 aa		7.52	□□□□□ -1.2
ECHDC1-223	ENST00000534442	DKK1	O94907	266 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	LTK	P29376	864 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	EML3	Q32P44	896 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ANKMY2	Q8IV38	441 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	OGFOD1	Q8N543	542 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	CAMKK2	Q96RR4	588 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	DOLK	Q9UPQ8	538 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	IVNS1ABP	Q9Y6Y0	642 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	PDE4DIP	Q5VU43	2346 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	PTCH1	Q13635	1447 aa		7.52	□□□□□ -1.21
ECHDC1-223	ENST00000534442	PZP	P20742	1482 aa		7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	NCOA2	Q15596	1464 aa		7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ESPN	B1AK53	854 aa		7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ZBTB7B	O15156	539 aa	Predicted RBP	7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	RGS19	P49795	217 aa		7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	NBPF8	Q3BBV2	869 aa		7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	FAM9A	Q8IZU1	332 aa	Predicted RBP	7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	NUP188	Q5SRE5	1749 aa		7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ASXL1	Q8IXJ9	1541 aa		7.51	□□□□□ -1.21
ECHDC1-223	ENST00000534442	NUP153	P49790	1475 aa	Known RBP	7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	MYO5C	Q9NQX4	1742 aa		7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	MFAP1	P55081	439 aa	Known RBP	7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	PLA2G2C	Q5R387	149 aa		7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	NPM2	Q86SE8	214 aa	Known RBP	7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	TRMT44	Q8IYL2	757 aa	Known RBP	7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	RGS22	Q8NE09	1264 aa		7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	FAM200A	Q8TCP9	573 aa		7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	SLC10A4	Q96EP9	437 aa		7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	KIAA1024	Q9UPX6	916 aa		7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	NOD1	Q9Y239	953 aa		7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	RREB1	Q92766	1687 aa		7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ADGRB2	O60241	1585 aa		7.5	□□□□□ -1.21
ECHDC1-223	ENST00000534442	MROH1	Q8NDA8	1641 aa		7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	RNF223	E7ERA6	249 aa		7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ITGBL1	O95965	494 aa	Predicted RBP	7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	SSFA2	P28290	1259 aa		7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	DPYD	Q12882	1025 aa		7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	OXLD1	Q5BKU9	147 aa		7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	TXNDC2	Q86VQ3	553 aa		7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	TRIM50	Q86XT4	487 aa		7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	CLP1	Q92989	425 aa	Known RBP	7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ZNF594	Q96JF6	807 aa	Predicted RBP	7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	DNAAF2	Q9NVR5	837 aa	Known RBP	7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	GNE	Q9Y223	722 aa	Known RBP	7.49	□□□□□ -1.21
ECHDC1-223	ENST00000534442	PLXNC1	O60486	1568 aa		7.48	□□□□□ -1.21
ECHDC1-223	ENST00000534442	SKOR1	P84550	965 aa		7.48	□□□□□ -1.21
ECHDC1-223	ENST00000534442	KCNC4	Q03721	635 aa		7.48	□□□□□ -1.21
ECHDC1-223	ENST00000534442	RNF20	Q5VTR2	975 aa		7.48	□□□□□ -1.21
ECHDC1-223	ENST00000534442	LARGE2	Q8N3Y3	721 aa		7.48	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ABHD8	Q96I13	439 aa		7.48	□□□□□ -1.21
ECHDC1-223	ENST00000534442	CUL9	Q8IWT3	2517 aa		7.48	□□□□□ -1.21
ECHDC1-223	ENST00000534442	PARD3	Q8TEW0	1356 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	SAMD9L	Q8IVG5	1584 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442		A0A0C4DFX4	3053 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ZBTB7A	O95365	584 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ATP1A2	P50993	1020 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	GTF2I	P78347	998 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	TRIM32	Q13049	653 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	B4GALNT3	Q6L9W6	998 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	SIX5	Q8N196	739 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	DDX17	Q92841	729 aa	Known RBP	7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	MTMR7	Q9Y216	660 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	PCDHGA11	Q9Y5H2	935 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ARHGAP5	Q13017	1502 aa		7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	7.47	□□□□□ -1.21
ECHDC1-223	ENST00000534442	CASZ1	Q86V15	1759 aa		7.46	□□□□□ -1.21
ECHDC1-223	ENST00000534442	ATF3	P18847	181 aa		7.46	□□□□□ -1.22
ECHDC1-223	ENST00000534442	HNRNPM	P52272	730 aa	Known RBP eCLIP	7.46	□□□□□ -1.22
ECHDC1-223	ENST00000534442	NBPF20	Q3BBV1	942 aa		7.46	□□□□□ -1.22
ECHDC1-223	ENST00000534442	ANKLE1	Q8NAG6	615 aa		7.46	□□□□□ -1.22
ECHDC1-223	ENST00000534442	HCST	Q9UBK5	93 aa		7.46	□□□□□ -1.22
ECHDC1-223	ENST00000534442	PCDHB11	Q9Y5F2	797 aa		7.46	□□□□□ -1.22
ECHDC1-223	ENST00000534442	ARHGAP35	Q9NRY4	1499 aa		7.45	□□□□□ -1.22
ECHDC1-223	ENST00000534442	ZBTB24	O43167	697 aa	Predicted RBP	7.45	□□□□□ -1.22
ECHDC1-223	ENST00000534442	FAM182B	Q5T319	152 aa		7.45	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SLC26A8	Q96RN1	970 aa		7.45	□□□□□ -1.22
ECHDC1-223	ENST00000534442	KCTD15	Q96SI1	283 aa	Predicted RBP	7.45	□□□□□ -1.22
ECHDC1-223	ENST00000534442	CDV3	Q9UKY7	258 aa	Known RBP	7.45	□□□□□ -1.22
ECHDC1-223	ENST00000534442	CTTNBP2	Q8WZ74	1663 aa		7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	UBR1	Q8IWV7	1749 aa		7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SLIT1	O75093	1534 aa		7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	ATP2B4	P23634	1241 aa		7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	VARS	P26640	1264 aa	Known RBP	7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	WNT7B	P56706	349 aa		7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	USP4	Q13107	963 aa		7.44	□□□□□ -1.22
ECHDC1-223	ENST00000534442	SWI5	Q1ZZU3	235 aa		7.44	□□□□□ -1.22

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