RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 BICDL1Q6ZP65 573 aa18.53■□□□□ 0.56
SF3B2-215ENST00000534307 TIAM2Q8IVF5 1701 aa18.52■□□□□ 0.56
SF3B2-215ENST00000534307 RGL2O15211 777 aa18.52■□□□□ 0.56
SF3B2-215ENST00000534307 CCDC146Q8IYE0 955 aa18.52■□□□□ 0.56
SF3B2-215ENST00000534307 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
SF3B2-215ENST00000534307 WDR43Q15061 677 aaKnown RBP eCLIP18.51■□□□□ 0.55
SF3B2-215ENST00000534307 DALRD3Q5D0E6 543 aaKnown RBP18.51■□□□□ 0.55
SF3B2-215ENST00000534307 CLEC4GQ6UXB4 293 aa18.51■□□□□ 0.55
SF3B2-215ENST00000534307 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
SF3B2-215ENST00000534307 C16orf71Q8IYS4 520 aaPredicted RBP18.51■□□□□ 0.55
SF3B2-215ENST00000534307 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
SF3B2-215ENST00000534307 COL11A2P13942 1736 aaPredicted RBP18.51■□□□□ 0.55
SF3B2-215ENST00000534307 LMOD3Q0VAK6 560 aa18.5■□□□□ 0.55
SF3B2-215ENST00000534307 PRR5LQ6MZQ0 368 aa18.5■□□□□ 0.55
SF3B2-215ENST00000534307 BABAM1Q9NWV8 329 aa18.5■□□□□ 0.55
SF3B2-215ENST00000534307 RRP7AQ9Y3A4 280 aaKnown RBP18.5■□□□□ 0.55
SF3B2-215ENST00000534307 SETDB2Q96T68 719 aa18.49■□□□□ 0.55
SF3B2-215ENST00000534307 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
SF3B2-215ENST00000534307 BRIP1Q9BX63 1249 aa18.48■□□□□ 0.55
SF3B2-215ENST00000534307 TSPYL4Q9UJ04 414 aa18.48■□□□□ 0.55
SF3B2-215ENST00000534307 KDM2BQ8NHM5 1336 aa18.48■□□□□ 0.55
SF3B2-215ENST00000534307 C2CD5Q86YS7 1000 aa18.47■□□□□ 0.55
SF3B2-215ENST00000534307 CNBD1Q8NA66 436 aa18.46■□□□□ 0.55
SF3B2-215ENST00000534307 RRAGCQ9HB90 399 aa18.46■□□□□ 0.55
SF3B2-215ENST00000534307 RNF181Q9P0P0 153 aa18.46■□□□□ 0.55
SF3B2-215ENST00000534307 ZNF652Q9Y2D9 606 aa18.46■□□□□ 0.55
SF3B2-215ENST00000534307 NEUROD2Q15784 382 aa18.45■□□□□ 0.54
SF3B2-215ENST00000534307 HLFQ16534 295 aa18.45■□□□□ 0.54
SF3B2-215ENST00000534307 LRP10Q7Z4F1 713 aa18.45■□□□□ 0.54
SF3B2-215ENST00000534307 CCDC24Q8N4L8 307 aa18.45■□□□□ 0.54
SF3B2-215ENST00000534307 ERBB4Q15303 1308 aa18.45■□□□□ 0.54
SF3B2-215ENST00000534307 NUP98P52948 1817 aa18.44■□□□□ 0.54
SF3B2-215ENST00000534307 H0YIN7 160 aa18.44■□□□□ 0.54
SF3B2-215ENST00000534307 CHL1O00533 1208 aa18.44■□□□□ 0.54
SF3B2-215ENST00000534307 PDE6BP35913 854 aa18.44■□□□□ 0.54
SF3B2-215ENST00000534307 TTLL6Q8N841 843 aa18.44■□□□□ 0.54
SF3B2-215ENST00000534307 PDZRN3Q9UPQ7 1066 aa18.44■□□□□ 0.54
SF3B2-215ENST00000534307 ERVV-1B6SEH8 477 aa18.43■□□□□ 0.54
SF3B2-215ENST00000534307 HSPA1AP0DMV8 641 aaKnown RBP18.43■□□□□ 0.54
SF3B2-215ENST00000534307 HSPA1BP0DMV9 641 aaKnown RBP18.43■□□□□ 0.54
SF3B2-215ENST00000534307 SMC1BQ8NDV3 1235 aa18.43■□□□□ 0.54
SF3B2-215ENST00000534307 MAP3K15Q6ZN16 1313 aa18.43■□□□□ 0.54
SF3B2-215ENST00000534307 ARFGEF2Q9Y6D5 1785 aa18.42■□□□□ 0.54
SF3B2-215ENST00000534307 PDIA6Q15084 440 aa18.42■□□□□ 0.54
SF3B2-215ENST00000534307 TTLL7Q6ZT98 887 aa18.42■□□□□ 0.54
SF3B2-215ENST00000534307 NIP7Q9Y221 180 aaKnown RBP eCLIP18.42■□□□□ 0.54
SF3B2-215ENST00000534307 DICER1Q9UPY3 1922 aaKnown RBP18.42■□□□□ 0.54
SF3B2-215ENST00000534307 ZNF316A6NFI3 1004 aaPredicted RBP18.41■□□□□ 0.54
SF3B2-215ENST00000534307 MYL6BP14649 208 aa18.41■□□□□ 0.54
SF3B2-215ENST00000534307 ST5P78524 1137 aa18.41■□□□□ 0.54
SF3B2-215ENST00000534307 CCDC184Q52MB2 194 aa18.41■□□□□ 0.54
SF3B2-215ENST00000534307 NBPF5PQ86XG9 351 aaPredicted RBP18.41■□□□□ 0.54
SF3B2-215ENST00000534307 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
SF3B2-215ENST00000534307 KLRG2A4D1S0 409 aaPredicted RBP18.4■□□□□ 0.54
SF3B2-215ENST00000534307 SRGNP10124 158 aa18.4■□□□□ 0.54
SF3B2-215ENST00000534307 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
SF3B2-215ENST00000534307 PROSER3Q2NL68 480 aa18.39■□□□□ 0.53
SF3B2-215ENST00000534307 STYK1Q6J9G0 422 aa18.39■□□□□ 0.53
SF3B2-215ENST00000534307 SLX4Q8IY92 1834 aa18.39■□□□□ 0.53
SF3B2-215ENST00000534307 FER1L6Q2WGJ9 1857 aa18.39■□□□□ 0.53
SF3B2-215ENST00000534307 APAF1O14727 1248 aa18.38■□□□□ 0.53
SF3B2-215ENST00000534307 EIF2S2P20042 333 aaKnown RBP18.38■□□□□ 0.53
SF3B2-215ENST00000534307 RASSF7Q02833 373 aa18.38■□□□□ 0.53
SF3B2-215ENST00000534307 TPTE2Q6XPS3 522 aa18.38■□□□□ 0.53
SF3B2-215ENST00000534307 KIF6Q6ZMV9 814 aa18.38■□□□□ 0.53
SF3B2-215ENST00000534307 ZNF622Q969S3 477 aaKnown RBP eCLIP18.38■□□□□ 0.53
SF3B2-215ENST00000534307 ZC3H4Q9UPT8 1303 aaKnown RBP18.38■□□□□ 0.53
SF3B2-215ENST00000534307 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
SF3B2-215ENST00000534307 CACNA1SQ13698 1873 aa18.37■□□□□ 0.53
SF3B2-215ENST00000534307 NFKBIEO00221 500 aa18.37■□□□□ 0.53
SF3B2-215ENST00000534307 NPHP1O15259 732 aa18.37■□□□□ 0.53
SF3B2-215ENST00000534307 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
SF3B2-215ENST00000534307 CFAP44Q96MT7 982 aa18.37■□□□□ 0.53
SF3B2-215ENST00000534307 ZBTB3Q9H5J0 574 aa18.37■□□□□ 0.53
SF3B2-215ENST00000534307 UBN2Q6ZU65 1347 aa18.37■□□□□ 0.53
SF3B2-215ENST00000534307 RIC1Q4ADV7 1423 aa18.36■□□□□ 0.53
SF3B2-215ENST00000534307 GIGYF2Q6Y7W6 1299 aaKnown RBP18.36■□□□□ 0.53
SF3B2-215ENST00000534307 ZNF34Q8IZ26 560 aa18.36■□□□□ 0.53
SF3B2-215ENST00000534307 CNKSR1Q969H4 720 aa18.36■□□□□ 0.53
SF3B2-215ENST00000534307 MASTLQ96GX5 879 aa18.36■□□□□ 0.53
SF3B2-215ENST00000534307 ABCC12Q96J65 1359 aa18.36■□□□□ 0.53
SF3B2-215ENST00000534307 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
SF3B2-215ENST00000534307 ANXA1P04083 346 aa18.35■□□□□ 0.53
SF3B2-215ENST00000534307 PRPF40BQ6NWY9 871 aaKnown RBP18.35■□□□□ 0.53
SF3B2-215ENST00000534307 FAM177BA6PVY3 158 aa18.34■□□□□ 0.53
SF3B2-215ENST00000534307 C21orf2O43822 256 aa18.34■□□□□ 0.53
SF3B2-215ENST00000534307 HOXB7P09629 217 aa18.34■□□□□ 0.53
SF3B2-215ENST00000534307 LMNB1P20700 586 aa18.34■□□□□ 0.53
SF3B2-215ENST00000534307 C7orf43Q8WVR3 580 aa18.34■□□□□ 0.53
SF3B2-215ENST00000534307 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
SF3B2-215ENST00000534307 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
SF3B2-215ENST00000534307 ANKRD36CQ5JPF3 1778 aa18.34■□□□□ 0.53
SF3B2-215ENST00000534307 NPR1P16066 1061 aa18.33■□□□□ 0.52
SF3B2-215ENST00000534307 CRY2Q49AN0 593 aa18.33■□□□□ 0.52
SF3B2-215ENST00000534307 NECTIN2Q92692 538 aa18.33■□□□□ 0.52
SF3B2-215ENST00000534307 DDX21Q9NR30 783 aaKnown RBP eCLIP18.33■□□□□ 0.52
SF3B2-215ENST00000534307 IFT57Q9NWB7 429 aa18.33■□□□□ 0.52
SF3B2-215ENST00000534307 LTBP3Q9NS15 1303 aa18.32■□□□□ 0.52
SF3B2-215ENST00000534307 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
SF3B2-215ENST00000534307 NTSR2O95665 410 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms