RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 PIM2Q9P1W9 311 aa24.71■■□□□ 1.55
PACS1-215ENST00000534273 BCS1LQ9Y276 419 aa24.71■■□□□ 1.55
PACS1-215ENST00000534273 AFDNP55196 1824 aaKnown RBP24.7■■□□□ 1.55
PACS1-215ENST00000534273 BCORQ6W2J9 1755 aa24.7■■□□□ 1.55
PACS1-215ENST00000534273 N4BP2Q86UW6 1770 aaPredicted RBP24.7■■□□□ 1.55
PACS1-215ENST00000534273 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.54
PACS1-215ENST00000534273 PROSER3Q2NL68 480 aa24.7■■□□□ 1.54
PACS1-215ENST00000534273 MAP3K15Q6ZN16 1313 aa24.69■■□□□ 1.54
PACS1-215ENST00000534273 HOXB7P09629 217 aa24.69■■□□□ 1.54
PACS1-215ENST00000534273 NCBP3Q53F19 620 aaKnown RBP24.69■■□□□ 1.54
PACS1-215ENST00000534273 KIF6Q6ZMV9 814 aa24.69■■□□□ 1.54
PACS1-215ENST00000534273 NECTIN2Q92692 538 aa24.69■■□□□ 1.54
PACS1-215ENST00000534273 CNBD1Q8NA66 436 aa24.68■■□□□ 1.54
PACS1-215ENST00000534273 BRIP1Q9BX63 1249 aa24.68■■□□□ 1.54
PACS1-215ENST00000534273 NIP7Q9Y221 180 aaKnown RBP eCLIP24.68■■□□□ 1.54
PACS1-215ENST00000534273 ANXA1P04083 346 aa24.67■■□□□ 1.54
PACS1-215ENST00000534273 DALRD3Q5D0E6 543 aaKnown RBP24.67■■□□□ 1.54
PACS1-215ENST00000534273 DUSP27Q5VZP5 1158 aa24.67■■□□□ 1.54
PACS1-215ENST00000534273 WWC1Q8IX03 1113 aa24.67■■□□□ 1.54
PACS1-215ENST00000534273 CCDC24Q8N4L8 307 aa24.67■■□□□ 1.54
PACS1-215ENST00000534273 NBPF5PQ86XG9 351 aaPredicted RBP24.66■■□□□ 1.54
PACS1-215ENST00000534273 C2CD5Q86YS7 1000 aa24.66■■□□□ 1.54
PACS1-215ENST00000534273 CHD4Q14839 1912 aa24.65■■□□□ 1.54
PACS1-215ENST00000534273 HDGFL1Q5TGJ6 251 aa24.65■■□□□ 1.54
PACS1-215ENST00000534273 FAM9BQ8IZU0 186 aa24.65■■□□□ 1.54
PACS1-215ENST00000534273 ZBTB3Q9H5J0 574 aa24.65■■□□□ 1.54
PACS1-215ENST00000534273 DDX21Q9NR30 783 aaKnown RBP eCLIP24.65■■□□□ 1.54
PACS1-215ENST00000534273 H0YIN7 160 aa24.64■■□□□ 1.54
PACS1-215ENST00000534273 PDE6BP35913 854 aa24.64■■□□□ 1.54
PACS1-215ENST00000534273 ST5P78524 1137 aa24.64■■□□□ 1.54
PACS1-215ENST00000534273 NPHP1O15259 732 aa24.63■■□□□ 1.53
PACS1-215ENST00000534273 CHPF2Q9P2E5 772 aa24.63■■□□□ 1.53
PACS1-215ENST00000534273 PDZRN3Q9UPQ7 1066 aa24.63■■□□□ 1.53
PACS1-215ENST00000534273 ATP10DQ9P241 1426 aa24.62■■□□□ 1.53
PACS1-215ENST00000534273 TPTE2Q6XPS3 522 aa24.62■■□□□ 1.53
PACS1-215ENST00000534273 COPS6Q7L5N1 327 aa24.62■■□□□ 1.53
PACS1-215ENST00000534273 ZNF784Q8NCA9 323 aaPredicted RBP24.62■■□□□ 1.53
PACS1-215ENST00000534273 XAGE3Q8WTP9 111 aa24.62■■□□□ 1.53
PACS1-215ENST00000534273 GIGYF2Q6Y7W6 1299 aaKnown RBP24.61■■□□□ 1.53
PACS1-215ENST00000534273 ARHGAP27Q6ZUM4 889 aa24.61■■□□□ 1.53
PACS1-215ENST00000534273 C8orf58Q8NAV2 365 aa24.61■■□□□ 1.53
PACS1-215ENST00000534273 BRCA1P38398 1863 aaKnown RBP24.61■■□□□ 1.53
PACS1-215ENST00000534273 IL16Q14005 1332 aa24.61■■□□□ 1.53
PACS1-215ENST00000534273 FAM177BA6PVY3 158 aa24.6■■□□□ 1.53
PACS1-215ENST00000534273 ZNF34Q8IZ26 560 aa24.6■■□□□ 1.53
PACS1-215ENST00000534273 DBF4Q9UBU7 674 aaPredicted RBP24.6■■□□□ 1.53
PACS1-215ENST00000534273 ELL2O00472 640 aaPredicted RBP24.59■■□□□ 1.53
PACS1-215ENST00000534273 GPTP24298 496 aa24.59■■□□□ 1.53
PACS1-215ENST00000534273 AIMP1Q12904 312 aaKnown RBP24.59■■□□□ 1.53
PACS1-215ENST00000534273 TTLL6Q8N841 843 aa24.59■■□□□ 1.53
PACS1-215ENST00000534273 TSR2Q969E8 191 aaKnown RBP24.59■■□□□ 1.53
PACS1-215ENST00000534273 SALL2Q9Y467 1007 aaPredicted RBP24.58■■□□□ 1.53
PACS1-215ENST00000534273 UBN2Q6ZU65 1347 aa24.58■■□□□ 1.52
PACS1-215ENST00000534273 ANKRD31Q8N7Z5 1873 aa24.58■■□□□ 1.52
PACS1-215ENST00000534273 ZNF622Q969S3 477 aaKnown RBP eCLIP24.57■■□□□ 1.52
PACS1-215ENST00000534273 NYXQ9GZU5 481 aa24.57■■□□□ 1.52
PACS1-215ENST00000534273 KLRG2A4D1S0 409 aaPredicted RBP24.56■■□□□ 1.52
PACS1-215ENST00000534273 SRGNP10124 158 aa24.56■■□□□ 1.52
PACS1-215ENST00000534273 WDR63Q8IWG1 891 aa24.56■■□□□ 1.52
PACS1-215ENST00000534273 HYPKQ9NX55 129 aa24.56■■□□□ 1.52
PACS1-215ENST00000534273 GTF2E1P29083 439 aaPredicted RBP24.55■■□□□ 1.52
PACS1-215ENST00000534273 SUSD4Q5VX71 490 aa24.55■■□□□ 1.52
PACS1-215ENST00000534273 STYK1Q6J9G0 422 aa24.55■■□□□ 1.52
PACS1-215ENST00000534273 TSPYL6Q8N831 410 aa24.55■■□□□ 1.52
PACS1-215ENST00000534273 IBTKQ9P2D0 1353 aaPredicted RBP24.54■■□□□ 1.52
PACS1-215ENST00000534273 NUP98P52948 1817 aa24.54■■□□□ 1.52
PACS1-215ENST00000534273 DLEC1Q9Y238 1755 aa24.53■■□□□ 1.52
PACS1-215ENST00000534273 ERFEQ4G0M1 354 aa24.53■■□□□ 1.52
PACS1-215ENST00000534273 PARP10Q53GL7 1025 aa24.53■■□□□ 1.52
PACS1-215ENST00000534273 HSP90AB3PQ58FF7 597 aa24.53■■□□□ 1.52
PACS1-215ENST00000534273 NUTM1Q86Y26 1132 aa24.53■■□□□ 1.52
PACS1-215ENST00000534273 MASTLQ96GX5 879 aa24.53■■□□□ 1.52
PACS1-215ENST00000534273 ARFGEF1Q9Y6D6 1849 aa24.53■■□□□ 1.52
PACS1-215ENST00000534273 ADCY9O60503 1353 aa24.53■■□□□ 1.52
PACS1-215ENST00000534273 NTSR2O95665 410 aa24.52■■□□□ 1.52
PACS1-215ENST00000534273 TCIRG1Q13488 830 aa24.52■■□□□ 1.52
PACS1-215ENST00000534273 PLBD2Q8NHP8 589 aa24.52■■□□□ 1.52
PACS1-215ENST00000534273 CNKSR1Q969H4 720 aa24.52■■□□□ 1.52
PACS1-215ENST00000534273 CHMP4AQ9BY43 222 aa24.52■■□□□ 1.52
PACS1-215ENST00000534273 ABCC12Q96J65 1359 aa24.52■■□□□ 1.52
PACS1-215ENST00000534273 ANKRD13DQ6ZTN6 518 aa24.51■■□□□ 1.51
PACS1-215ENST00000534273 COL11A2P13942 1736 aaPredicted RBP24.5■■□□□ 1.51
PACS1-215ENST00000534273 CCER2I3L3R5 266 aa24.5■■□□□ 1.51
PACS1-215ENST00000534273 NPR1P16066 1061 aa24.5■■□□□ 1.51
PACS1-215ENST00000534273 CCDC30Q5VVM6 783 aa24.5■■□□□ 1.51
PACS1-215ENST00000534273 PPP1R42Q7Z4L9 355 aa24.5■■□□□ 1.51
PACS1-215ENST00000534273 FANCIQ9NVI1 1328 aa24.5■■□□□ 1.51
PACS1-215ENST00000534273 NLRP10Q86W26 655 aa24.49■■□□□ 1.51
PACS1-215ENST00000534273 UTP14AQ9BVJ6 771 aaKnown RBP24.49■■□□□ 1.51
PACS1-215ENST00000534273 PRPF40BQ6NWY9 871 aaKnown RBP24.48■■□□□ 1.51
PACS1-215ENST00000534273 PHAXQ9H814 394 aaKnown RBP24.48■■□□□ 1.51
PACS1-215ENST00000534273 C21orf2O43822 256 aa24.47■■□□□ 1.51
PACS1-215ENST00000534273 TWISTNBQ3B726 338 aaPredicted RBP24.47■■□□□ 1.51
PACS1-215ENST00000534273 CRY2Q49AN0 593 aa24.47■■□□□ 1.51
PACS1-215ENST00000534273 C9orf131Q5VYM1 1079 aa24.47■■□□□ 1.51
PACS1-215ENST00000534273 SPINK5Q9NQ38 1064 aaPredicted RBP24.47■■□□□ 1.51
PACS1-215ENST00000534273 RIC1Q4ADV7 1423 aa24.46■■□□□ 1.51
PACS1-215ENST00000534273 SLC10A5Q5PT55 438 aa24.46■■□□□ 1.51
PACS1-215ENST00000534273 ZNF219Q9P2Y4 722 aaPredicted RBP24.46■■□□□ 1.51
PACS1-215ENST00000534273 ISCA1Q9BUE6 129 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms