RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 DLC1Q96QB1 1528 aa7.83□□□□□ -1.16
CHKA-208ENST00000533910 PTPRMP28827 1452 aa7.82□□□□□ -1.16
CHKA-208ENST00000533910 CCER2I3L3R5 266 aa7.82□□□□□ -1.16
CHKA-208ENST00000533910 ANP32CO43423 234 aa7.82□□□□□ -1.16
CHKA-208ENST00000533910 TSGA10IPQ3SY00 556 aa7.82□□□□□ -1.16
CHKA-208ENST00000533910 MSS51Q4VC12 460 aa7.82□□□□□ -1.16
CHKA-208ENST00000533910 FCF1Q9Y324 198 aaKnown RBP7.82□□□□□ -1.16
CHKA-208ENST00000533910 CEP170BQ9Y4F5 1589 aaPredicted RBP7.82□□□□□ -1.16
CHKA-208ENST00000533910 MMP16P51512 607 aa7.81□□□□□ -1.16
CHKA-208ENST00000533910 PCDHB9Q9Y5E1 797 aa7.81□□□□□ -1.16
CHKA-208ENST00000533910 TULP4Q9NRJ4 1543 aa7.81□□□□□ -1.16
CHKA-208ENST00000533910 TMEM2Q9UHN6 1383 aa7.81□□□□□ -1.16
CHKA-208ENST00000533910 CPS1P31327 1500 aa7.8□□□□□ -1.16
CHKA-208ENST00000533910 TMEM88BA6NKF7 163 aa7.8□□□□□ -1.16
CHKA-208ENST00000533910 ZBTB24O43167 697 aaPredicted RBP7.8□□□□□ -1.16
CHKA-208ENST00000533910 ATG7O95352 703 aa7.8□□□□□ -1.16
CHKA-208ENST00000533910 TMF1P82094 1093 aa7.8□□□□□ -1.16
CHKA-208ENST00000533910 FOXC1Q12948 553 aa7.8□□□□□ -1.16
CHKA-208ENST00000533910 VRTNQ9H8Y1 702 aa7.8□□□□□ -1.16
CHKA-208ENST00000533910 CEP126Q9P2H0 1117 aa7.8□□□□□ -1.16
CHKA-208ENST00000533910 CCDC9Q9Y3X0 531 aaKnown RBP7.8□□□□□ -1.16
CHKA-208ENST00000533910 DIP2AQ14689 1571 aa7.8□□□□□ -1.16
CHKA-208ENST00000533910 YTHDC2Q9H6S0 1430 aaKnown RBP7.79□□□□□ -1.16
CHKA-208ENST00000533910 USP32Q8NFA0 1604 aa7.79□□□□□ -1.16
CHKA-208ENST00000533910 USP17L3A6NCW0 530 aa7.79□□□□□ -1.16
CHKA-208ENST00000533910 USP17L4A6NCW7 530 aa7.79□□□□□ -1.16
CHKA-208ENST00000533910 USP17L2Q6R6M4 530 aa7.79□□□□□ -1.16
CHKA-208ENST00000533910 USP17L1Q7RTZ2 530 aa7.79□□□□□ -1.16
CHKA-208ENST00000533910 STK32AQ8WU08 396 aa7.79□□□□□ -1.16
CHKA-208ENST00000533910 KTN1Q86UP2 1357 aaKnown RBP7.79□□□□□ -1.16
CHKA-208ENST00000533910 CENPJQ9HC77 1338 aaPredicted RBP7.78□□□□□ -1.16
CHKA-208ENST00000533910 TECPR2O15040 1411 aa7.78□□□□□ -1.16
CHKA-208ENST00000533910 USP17L5A8MUK1 530 aa7.78□□□□□ -1.16
CHKA-208ENST00000533910 PTK2Q05397 1052 aa7.78□□□□□ -1.16
CHKA-208ENST00000533910 ADAM32Q8TC27 787 aa7.78□□□□□ -1.16
CHKA-208ENST00000533910 CARD14Q9BXL6 1004 aa7.78□□□□□ -1.16
CHKA-208ENST00000533910 UNC93B1Q9H1C4 597 aa7.78□□□□□ -1.16
CHKA-208ENST00000533910 PRKRIP1Q9H875 184 aaPredicted RBP7.78□□□□□ -1.16
CHKA-208ENST00000533910 ZMIZ1Q9ULJ6 1067 aa7.78□□□□□ -1.16
CHKA-208ENST00000533910 MED14O60244 1454 aa7.78□□□□□ -1.16
CHKA-208ENST00000533910 ADAMTS13Q76LX8 1427 aa7.78□□□□□ -1.16
CHKA-208ENST00000533910 LRPPRCP42704 1394 aaKnown RBP7.77□□□□□ -1.17
CHKA-208ENST00000533910 PLEKHG1Q9ULL1 1385 aa7.77□□□□□ -1.17
CHKA-208ENST00000533910 LINC01559Q495D7 138 aa7.77□□□□□ -1.17
CHKA-208ENST00000533910 PDXDC2PQ6P474 469 aa7.77□□□□□ -1.17
CHKA-208ENST00000533910 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.77□□□□□ -1.17
CHKA-208ENST00000533910 ARHGAP9Q9BRR9 750 aa7.77□□□□□ -1.17
CHKA-208ENST00000533910 PKD2L1Q9P0L9 805 aa7.77□□□□□ -1.17
CHKA-208ENST00000533910 USTQ9Y2C2 406 aa7.77□□□□□ -1.17
CHKA-208ENST00000533910 SETD1BQ9UPS6 1966 aaKnown RBP7.77□□□□□ -1.17
CHKA-208ENST00000533910 ZC3H4Q9UPT8 1303 aaKnown RBP7.77□□□□□ -1.17
CHKA-208ENST00000533910 ADGRB2O60241 1585 aa7.76□□□□□ -1.17
CHKA-208ENST00000533910 PARD3Q8TEW0 1356 aa7.76□□□□□ -1.17
CHKA-208ENST00000533910 XRN1Q8IZH2 1706 aaKnown RBP7.76□□□□□ -1.17
CHKA-208ENST00000533910 NCOA4Q13772 614 aa7.76□□□□□ -1.17
CHKA-208ENST00000533910 CRTC2Q53ET0 693 aaPredicted RBP7.76□□□□□ -1.17
CHKA-208ENST00000533910 TMEM164Q5U3C3 297 aa7.76□□□□□ -1.17
CHKA-208ENST00000533910 TMEM132EQ6IEE7 984 aa7.76□□□□□ -1.17
CHKA-208ENST00000533910 CYP4X1Q8N118 509 aa7.76□□□□□ -1.17
CHKA-208ENST00000533910 PHTF2Q8N3S3 785 aa7.76□□□□□ -1.17
CHKA-208ENST00000533910 BAP1Q92560 729 aa7.76□□□□□ -1.17
CHKA-208ENST00000533910 FOXJ1Q92949 421 aa7.76□□□□□ -1.17
CHKA-208ENST00000533910 MKRN1Q9UHC7 482 aaKnown RBP7.76□□□□□ -1.17
CHKA-208ENST00000533910 ABCC11Q96J66 1382 aa7.75□□□□□ -1.17
CHKA-208ENST00000533910 MAGEB6P1A0A0J9YX57 407 aa7.75□□□□□ -1.17
CHKA-208ENST00000533910 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
CHKA-208ENST00000533910 BRD1O95696 1058 aa7.75□□□□□ -1.17
CHKA-208ENST00000533910 CEBPAP49715 358 aaPredicted RBP7.75□□□□□ -1.17
CHKA-208ENST00000533910 SLFNL1Q499Z3 407 aa7.75□□□□□ -1.17
CHKA-208ENST00000533910 TMCO4Q5TGY1 634 aa7.75□□□□□ -1.17
CHKA-208ENST00000533910 RNF135Q8IUD6 432 aa7.75□□□□□ -1.17
CHKA-208ENST00000533910 PUS7Q96PZ0 661 aaKnown RBP7.75□□□□□ -1.17
CHKA-208ENST00000533910 POLR3GLQ9BT43 218 aa7.75□□□□□ -1.17
CHKA-208ENST00000533910 NOVA2Q9UNW9 492 aaKnown RBP7.75□□□□□ -1.17
CHKA-208ENST00000533910 TRAK1Q9UPV9 953 aa7.75□□□□□ -1.17
CHKA-208ENST00000533910 NPC1L1Q9UHC9 1359 aa7.74□□□□□ -1.17
CHKA-208ENST00000533910 SH3BP5LQ7L8J4 393 aa7.74□□□□□ -1.17
CHKA-208ENST00000533910 ZBTB33Q86T24 672 aa7.74□□□□□ -1.17
CHKA-208ENST00000533910 PLPP7Q8NBV4 271 aa7.74□□□□□ -1.17
CHKA-208ENST00000533910 ARMC2Q8NEN0 867 aa7.74□□□□□ -1.17
CHKA-208ENST00000533910 SLAIN2Q9P270 581 aa7.74□□□□□ -1.17
CHKA-208ENST00000533910 MTMR7Q9Y216 660 aa7.74□□□□□ -1.17
CHKA-208ENST00000533910 IVNS1ABPQ9Y6Y0 642 aa7.74□□□□□ -1.17
CHKA-208ENST00000533910 FAM135BQ49AJ0 1406 aa7.74□□□□□ -1.17
CHKA-208ENST00000533910 METP08581 1390 aa7.73□□□□□ -1.17
CHKA-208ENST00000533910 NINLQ9Y2I6 1382 aa7.73□□□□□ -1.17
CHKA-208ENST00000533910 ANKRD26Q9UPS8 1709 aa7.73□□□□□ -1.17
CHKA-208ENST00000533910 CENPBP07199 599 aaPredicted RBP7.73□□□□□ -1.17
CHKA-208ENST00000533910 MFAP1P55081 439 aaKnown RBP7.73□□□□□ -1.17
CHKA-208ENST00000533910 C4orf48Q5BLP8 95 aa7.73□□□□□ -1.17
CHKA-208ENST00000533910 NBPF14Q5TI25 921 aa7.73□□□□□ -1.17
CHKA-208ENST00000533910 FOXD4L5Q5VV16 416 aaPredicted RBP7.73□□□□□ -1.17
CHKA-208ENST00000533910 NFATC2IPQ8NCF5 419 aa7.73□□□□□ -1.17
CHKA-208ENST00000533910 FOXD4L4Q8WXT5 416 aaPredicted RBP7.73□□□□□ -1.17
CHKA-208ENST00000533910 ZNF775Q96BV0 537 aaPredicted RBP7.73□□□□□ -1.17
CHKA-208ENST00000533910 AAASQ9NRG9 546 aa7.73□□□□□ -1.17
CHKA-208ENST00000533910 TOR4AQ9NXH8 423 aa7.73□□□□□ -1.17
CHKA-208ENST00000533910 TOPAZ1Q8N9V7 1692 aa7.73□□□□□ -1.17
CHKA-208ENST00000533910 PTCH1Q13635 1447 aa7.72□□□□□ -1.17
CHKA-208ENST00000533910 USP17L15C9J2P7 530 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms