RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 PLEKHF1Q96S99 279 aa13.74□□□□□ -0.21
CLP1-206ENST00000533905 BRIP1Q9BX63 1249 aa13.74□□□□□ -0.21
CLP1-206ENST00000533905 DLG5Q8TDM6 1919 aa13.74□□□□□ -0.21
CLP1-206ENST00000533905 SNED1Q8TER0 1413 aa13.73□□□□□ -0.21
CLP1-206ENST00000533905 LAMB4A4D0S4 1761 aa13.73□□□□□ -0.21
CLP1-206ENST00000533905 ARFGEF2Q9Y6D5 1785 aa13.73□□□□□ -0.21
CLP1-206ENST00000533905 GLTPD2A6NH11 291 aa13.73□□□□□ -0.21
CLP1-206ENST00000533905 SRGNP10124 158 aa13.73□□□□□ -0.21
CLP1-206ENST00000533905 PRPF40BQ6NWY9 871 aaKnown RBP13.73□□□□□ -0.21
CLP1-206ENST00000533905 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
CLP1-206ENST00000533905 C7orf43Q8WVR3 580 aa13.73□□□□□ -0.21
CLP1-206ENST00000533905 KDM2BQ8NHM5 1336 aa13.72□□□□□ -0.21
CLP1-206ENST00000533905 A0A087WZG4 1122 aa13.72□□□□□ -0.21
CLP1-206ENST00000533905 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
CLP1-206ENST00000533905 C3orf67Q6ZVT6 689 aa13.72□□□□□ -0.21
CLP1-206ENST00000533905 DDNO94850 711 aaPredicted RBP13.71□□□□□ -0.21
CLP1-206ENST00000533905 KLRG1Q96E93 195 aa13.71□□□□□ -0.21
CLP1-206ENST00000533905 UBN2Q6ZU65 1347 aa13.7□□□□□ -0.22
CLP1-206ENST00000533905 ZNF541Q9H0D2 1346 aa13.7□□□□□ -0.22
CLP1-206ENST00000533905 COL13A1Q5TAT6 717 aaPredicted RBP13.7□□□□□ -0.22
CLP1-206ENST00000533905 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
CLP1-206ENST00000533905 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
CLP1-206ENST00000533905 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
CLP1-206ENST00000533905 SNRPA1P09661 255 aaKnown RBP13.69□□□□□ -0.22
CLP1-206ENST00000533905 FSTL1Q12841 308 aa13.69□□□□□ -0.22
CLP1-206ENST00000533905 NUTM1Q86Y26 1132 aa13.69□□□□□ -0.22
CLP1-206ENST00000533905 C16orf71Q8IYS4 520 aaPredicted RBP13.69□□□□□ -0.22
CLP1-206ENST00000533905 TEX13AQ9BXU3 409 aaPredicted RBP13.69□□□□□ -0.22
CLP1-206ENST00000533905 ANXA1P04083 346 aa13.68□□□□□ -0.22
CLP1-206ENST00000533905 PDE6BP35913 854 aa13.68□□□□□ -0.22
CLP1-206ENST00000533905 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
CLP1-206ENST00000533905 PROSER3Q2NL68 480 aa13.68□□□□□ -0.22
CLP1-206ENST00000533905 ERFEQ4G0M1 354 aa13.68□□□□□ -0.22
CLP1-206ENST00000533905 LRP10Q7Z4F1 713 aa13.68□□□□□ -0.22
CLP1-206ENST00000533905 NBPF5PQ86XG9 351 aaPredicted RBP13.68□□□□□ -0.22
CLP1-206ENST00000533905 JMYQ8N9B5 988 aa13.68□□□□□ -0.22
CLP1-206ENST00000533905 ZNF428Q96B54 188 aa13.68□□□□□ -0.22
CLP1-206ENST00000533905 ZNF277Q9NRM2 450 aaPredicted RBP13.68□□□□□ -0.22
CLP1-206ENST00000533905 NIP7Q9Y221 180 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLP1-206ENST00000533905 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
CLP1-206ENST00000533905 LTBP1Q14766 1721 aa13.67□□□□□ -0.22
CLP1-206ENST00000533905 ZC3H4Q9UPT8 1303 aaKnown RBP13.67□□□□□ -0.22
CLP1-206ENST00000533905 COL4A1P02462 1669 aa13.67□□□□□ -0.22
CLP1-206ENST00000533905 KLRG2A4D1S0 409 aaPredicted RBP13.67□□□□□ -0.22
CLP1-206ENST00000533905 STYK1Q6J9G0 422 aa13.67□□□□□ -0.22
CLP1-206ENST00000533905 SMC1BQ8NDV3 1235 aa13.67□□□□□ -0.22
CLP1-206ENST00000533905 RTF1Q92541 710 aaKnown RBP13.67□□□□□ -0.22
CLP1-206ENST00000533905 TAOK3Q9H2K8 898 aa13.67□□□□□ -0.22
CLP1-206ENST00000533905 LTBP3Q9NS15 1303 aa13.66□□□□□ -0.22
CLP1-206ENST00000533905 MYL6BP14649 208 aa13.66□□□□□ -0.22
CLP1-206ENST00000533905 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
CLP1-206ENST00000533905 GPTP24298 496 aa13.66□□□□□ -0.22
CLP1-206ENST00000533905 ST5P78524 1137 aa13.66□□□□□ -0.22
CLP1-206ENST00000533905 TAF7Q15545 349 aaPredicted RBP13.66□□□□□ -0.22
CLP1-206ENST00000533905 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
CLP1-206ENST00000533905 MASTLQ96GX5 879 aa13.66□□□□□ -0.22
CLP1-206ENST00000533905 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
CLP1-206ENST00000533905 NFE2L2Q16236 605 aa13.65□□□□□ -0.22
CLP1-206ENST00000533905 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
CLP1-206ENST00000533905 ADAMTSL1Q8N6G6 1762 aa13.65□□□□□ -0.22
CLP1-206ENST00000533905 PDIA6Q15084 440 aa13.64□□□□□ -0.23
CLP1-206ENST00000533905 RRP7AQ9Y3A4 280 aaKnown RBP13.64□□□□□ -0.23
CLP1-206ENST00000533905 NUP98P52948 1817 aa13.63□□□□□ -0.23
CLP1-206ENST00000533905 NPHP1O15259 732 aa13.63□□□□□ -0.23
CLP1-206ENST00000533905 HTATSF1O43719 755 aaKnown RBP13.63□□□□□ -0.23
CLP1-206ENST00000533905 FMR1Q06787 632 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLP1-206ENST00000533905 SUSD4Q5VX71 490 aa13.63□□□□□ -0.23
CLP1-206ENST00000533905 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
CLP1-206ENST00000533905 SYNE4Q8N205 404 aa13.63□□□□□ -0.23
CLP1-206ENST00000533905 CNKSR1Q969H4 720 aa13.63□□□□□ -0.23
CLP1-206ENST00000533905 NTSR2O95665 410 aa13.62□□□□□ -0.23
CLP1-206ENST00000533905 NPR1P16066 1061 aa13.62□□□□□ -0.23
CLP1-206ENST00000533905 MAP3K15Q6ZN16 1313 aa13.62□□□□□ -0.23
CLP1-206ENST00000533905 TCERG1O14776 1098 aaKnown RBP13.61□□□□□ -0.23
CLP1-206ENST00000533905 HSPA1AP0DMV8 641 aaKnown RBP13.61□□□□□ -0.23
CLP1-206ENST00000533905 HSPA1BP0DMV9 641 aaKnown RBP13.61□□□□□ -0.23
CLP1-206ENST00000533905 FKBP4Q02790 459 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLP1-206ENST00000533905 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
CLP1-206ENST00000533905 CCDC93Q567U6 631 aa13.61□□□□□ -0.23
CLP1-206ENST00000533905 CCDC146Q8IYE0 955 aa13.61□□□□□ -0.23
CLP1-206ENST00000533905 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
CLP1-206ENST00000533905 MKRN1Q9UHC7 482 aaKnown RBP13.61□□□□□ -0.23
CLP1-206ENST00000533905 RNF123Q5XPI4 1314 aa13.61□□□□□ -0.23
CLP1-206ENST00000533905 RIC1Q4ADV7 1423 aa13.6□□□□□ -0.23
CLP1-206ENST00000533905 TAF1DQ9H5J8 278 aaPredicted RBP13.6□□□□□ -0.23
CLP1-206ENST00000533905 PASKQ96RG2 1323 aa13.6□□□□□ -0.23
CLP1-206ENST00000533905 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
CLP1-206ENST00000533905 ZNF34Q8IZ26 560 aa13.59□□□□□ -0.23
CLP1-206ENST00000533905 L3MBTL3Q96JM7 780 aaPredicted RBP13.59□□□□□ -0.23
CLP1-206ENST00000533905 ZNF652Q9Y2D9 606 aa13.59□□□□□ -0.23
CLP1-206ENST00000533905 CAPN15O75808 1086 aa13.58□□□□□ -0.24
CLP1-206ENST00000533905 TPTE2Q6XPS3 522 aa13.58□□□□□ -0.24
CLP1-206ENST00000533905 PDZRN3Q9UPQ7 1066 aa13.58□□□□□ -0.24
CLP1-206ENST00000533905 LAMB2P55268 1798 aa13.58□□□□□ -0.24
CLP1-206ENST00000533905 FZD9O00144 591 aa13.57□□□□□ -0.24
CLP1-206ENST00000533905 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
CLP1-206ENST00000533905 EIF2S2P20042 333 aaKnown RBP13.57□□□□□ -0.24
CLP1-206ENST00000533905 IARSP41252 1262 aaKnown RBP13.57□□□□□ -0.24
CLP1-206ENST00000533905 DPY19L2Q6NUT2 758 aa13.57□□□□□ -0.24
CLP1-206ENST00000533905 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms