RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 BCORQ6W2J9 1755 aa20.27■□□□□ 0.84
CPSF1-211ENST00000533492 RGL2O15211 777 aa20.27■□□□□ 0.84
CPSF1-211ENST00000533492 RUNDC1Q96C34 613 aa20.27■□□□□ 0.84
CPSF1-211ENST00000533492 PRKRIP1Q9H875 184 aaPredicted RBP20.27■□□□□ 0.84
CPSF1-211ENST00000533492 MYL6BP14649 208 aa20.26■□□□□ 0.83
CPSF1-211ENST00000533492 TPTE2Q6XPS3 522 aa20.26■□□□□ 0.83
CPSF1-211ENST00000533492 BABAM1Q9NWV8 329 aa20.26■□□□□ 0.83
CPSF1-211ENST00000533492 DLEC1Q9Y238 1755 aa20.26■□□□□ 0.83
CPSF1-211ENST00000533492 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
CPSF1-211ENST00000533492 KIF3CO14782 793 aa20.25■□□□□ 0.83
CPSF1-211ENST00000533492 ZEB1P37275 1124 aaPredicted RBP20.25■□□□□ 0.83
CPSF1-211ENST00000533492 RASSF7Q02833 373 aa20.25■□□□□ 0.83
CPSF1-211ENST00000533492 HLFQ16534 295 aa20.25■□□□□ 0.83
CPSF1-211ENST00000533492 KIF6Q6ZMV9 814 aa20.25■□□□□ 0.83
CPSF1-211ENST00000533492 CNKSR1Q969H4 720 aa20.25■□□□□ 0.83
CPSF1-211ENST00000533492 ZNF219Q9P2Y4 722 aaPredicted RBP20.25■□□□□ 0.83
CPSF1-211ENST00000533492 ADAMTS8Q9UP79 889 aa20.25■□□□□ 0.83
CPSF1-211ENST00000533492 LAMB4A4D0S4 1761 aa20.25■□□□□ 0.83
CPSF1-211ENST00000533492 ANKRD31Q8N7Z5 1873 aa20.24■□□□□ 0.83
CPSF1-211ENST00000533492 GTF2E1P29083 439 aaPredicted RBP20.24■□□□□ 0.83
CPSF1-211ENST00000533492 ERVV-1B6SEH8 477 aa20.23■□□□□ 0.83
CPSF1-211ENST00000533492 C21orf2O43822 256 aa20.23■□□□□ 0.83
CPSF1-211ENST00000533492 EIF2S2P20042 333 aaKnown RBP20.23■□□□□ 0.83
CPSF1-211ENST00000533492 LMNB1P20700 586 aa20.23■□□□□ 0.83
CPSF1-211ENST00000533492 STYK1Q6J9G0 422 aa20.23■□□□□ 0.83
CPSF1-211ENST00000533492 MASTLQ96GX5 879 aa20.23■□□□□ 0.83
CPSF1-211ENST00000533492 KDM2BQ8NHM5 1336 aa20.23■□□□□ 0.83
CPSF1-211ENST00000533492 SBF1O95248 1867 aa20.22■□□□□ 0.83
CPSF1-211ENST00000533492 SRGNP10124 158 aa20.22■□□□□ 0.83
CPSF1-211ENST00000533492 NMRK2Q9NPI5 230 aa20.22■□□□□ 0.83
CPSF1-211ENST00000533492 LAS1LQ9Y4W2 734 aaKnown RBP20.22■□□□□ 0.83
CPSF1-211ENST00000533492 ERBB4Q15303 1308 aa20.22■□□□□ 0.83
CPSF1-211ENST00000533492 MAP3K15Q6ZN16 1313 aa20.22■□□□□ 0.83
CPSF1-211ENST00000533492 TTLL7Q6ZT98 887 aa20.21■□□□□ 0.83
CPSF1-211ENST00000533492 NYXQ9GZU5 481 aa20.2■□□□□ 0.82
CPSF1-211ENST00000533492 ZBTB3Q9H5J0 574 aa20.2■□□□□ 0.82
CPSF1-211ENST00000533492 TOMM70O94826 608 aa20.19■□□□□ 0.82
CPSF1-211ENST00000533492 C16orf71Q8IYS4 520 aaPredicted RBP20.19■□□□□ 0.82
CPSF1-211ENST00000533492 TRIM35Q9UPQ4 493 aa20.19■□□□□ 0.82
CPSF1-211ENST00000533492 ZC3H4Q9UPT8 1303 aaKnown RBP20.19■□□□□ 0.82
CPSF1-211ENST00000533492 NFKBIEO00221 500 aa20.18■□□□□ 0.82
CPSF1-211ENST00000533492 NPR1P16066 1061 aa20.18■□□□□ 0.82
CPSF1-211ENST00000533492 SOGA3Q5TF21 947 aa20.18■□□□□ 0.82
CPSF1-211ENST00000533492 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
CPSF1-211ENST00000533492 COL11A2P13942 1736 aaPredicted RBP20.18■□□□□ 0.82
CPSF1-211ENST00000533492 CHL1O00533 1208 aa20.17■□□□□ 0.82
CPSF1-211ENST00000533492 HSPA6P17066 643 aa20.17■□□□□ 0.82
CPSF1-211ENST00000533492 GPTP24298 496 aa20.17■□□□□ 0.82
CPSF1-211ENST00000533492 PRELPP51888 382 aa20.17■□□□□ 0.82
CPSF1-211ENST00000533492 NUP98P52948 1817 aa20.16■□□□□ 0.82
CPSF1-211ENST00000533492 KLRG2A4D1S0 409 aaPredicted RBP20.16■□□□□ 0.82
CPSF1-211ENST00000533492 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
CPSF1-211ENST00000533492 RRAGCQ9HB90 399 aa20.16■□□□□ 0.82
CPSF1-211ENST00000533492 CCDC88AQ3V6T2 1871 aa20.16■□□□□ 0.82
CPSF1-211ENST00000533492 GIGYF2Q6Y7W6 1299 aaKnown RBP20.15■□□□□ 0.82
CPSF1-211ENST00000533492 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
CPSF1-211ENST00000533492 TAOK3Q9H2K8 898 aa20.15■□□□□ 0.82
CPSF1-211ENST00000533492 SLX4Q8IY92 1834 aa20.15■□□□□ 0.82
CPSF1-211ENST00000533492 GLTPD2A6NH11 291 aa20.14■□□□□ 0.81
CPSF1-211ENST00000533492 ANXA1P04083 346 aa20.14■□□□□ 0.81
CPSF1-211ENST00000533492 ALDH1B1P30837 517 aa20.14■□□□□ 0.81
CPSF1-211ENST00000533492 PDIA6Q15084 440 aa20.14■□□□□ 0.81
CPSF1-211ENST00000533492 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
CPSF1-211ENST00000533492 CACNA1SQ13698 1873 aa20.13■□□□□ 0.81
CPSF1-211ENST00000533492 PROSER3Q2NL68 480 aa20.13■□□□□ 0.81
CPSF1-211ENST00000533492 SUSD4Q5VX71 490 aa20.13■□□□□ 0.81
CPSF1-211ENST00000533492 DPY19L2Q6NUT2 758 aa20.13■□□□□ 0.81
CPSF1-211ENST00000533492 PPP1R42Q7Z4L9 355 aa20.13■□□□□ 0.81
CPSF1-211ENST00000533492 ZNF34Q8IZ26 560 aa20.13■□□□□ 0.81
CPSF1-211ENST00000533492 LTBP3Q9NS15 1303 aa20.12■□□□□ 0.81
CPSF1-211ENST00000533492 APAF1O14727 1248 aa20.12■□□□□ 0.81
CPSF1-211ENST00000533492 AIMP1Q12904 312 aaKnown RBP20.12■□□□□ 0.81
CPSF1-211ENST00000533492 KRT24Q2M2I5 525 aa20.12■□□□□ 0.81
CPSF1-211ENST00000533492 CCDC93Q567U6 631 aa20.12■□□□□ 0.81
CPSF1-211ENST00000533492 COPS6Q7L5N1 327 aa20.12■□□□□ 0.81
CPSF1-211ENST00000533492 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
CPSF1-211ENST00000533492 CFAP44Q96MT7 982 aa20.12■□□□□ 0.81
CPSF1-211ENST00000533492 UBN2Q6ZU65 1347 aa20.11■□□□□ 0.81
CPSF1-211ENST00000533492 PARP10Q53GL7 1025 aa20.11■□□□□ 0.81
CPSF1-211ENST00000533492 LRP10Q7Z4F1 713 aa20.11■□□□□ 0.81
CPSF1-211ENST00000533492 C7orf43Q8WVR3 580 aa20.11■□□□□ 0.81
CPSF1-211ENST00000533492 DDX21Q9NR30 783 aaKnown RBP eCLIP20.11■□□□□ 0.81
CPSF1-211ENST00000533492 FER1L6Q2WGJ9 1857 aa20.11■□□□□ 0.81
CPSF1-211ENST00000533492 XAGE3Q8WTP9 111 aa20.1■□□□□ 0.81
CPSF1-211ENST00000533492 RPGRQ92834 1020 aaKnown RBP20.1■□□□□ 0.81
CPSF1-211ENST00000533492 VEGFAP15692 232 aaPredicted RBP20.09■□□□□ 0.81
CPSF1-211ENST00000533492 CALD1Q05682 793 aaKnown RBP20.09■□□□□ 0.81
CPSF1-211ENST00000533492 HSP90AB3PQ58FF7 597 aa20.09■□□□□ 0.81
CPSF1-211ENST00000533492 HDGFL1Q5TGJ6 251 aa20.09■□□□□ 0.81
CPSF1-211ENST00000533492 ABCC12Q96J65 1359 aa20.08■□□□□ 0.81
CPSF1-211ENST00000533492 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.81
CPSF1-211ENST00000533492 ARFGEF2Q9Y6D5 1785 aa20.08■□□□□ 0.81
CPSF1-211ENST00000533492 NTSR2O95665 410 aa20.08■□□□□ 0.81
CPSF1-211ENST00000533492 HOXB7P09629 217 aa20.08■□□□□ 0.81
CPSF1-211ENST00000533492 CRY2Q49AN0 593 aa20.08■□□□□ 0.81
CPSF1-211ENST00000533492 RTKN2Q8IZC4 609 aa20.08■□□□□ 0.81
CPSF1-211ENST00000533492 UTP14AQ9BVJ6 771 aaKnown RBP20.08■□□□□ 0.81
CPSF1-211ENST00000533492 TNRC6CQ9HCJ0 1690 aaKnown RBP20.07■□□□□ 0.8
CPSF1-211ENST00000533492 ZNF316A6NFI3 1004 aaPredicted RBP20.07■□□□□ 0.8
CPSF1-211ENST00000533492 APLP1P51693 650 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms