RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 GPR162Q16538 588 aa12.83□□□□□ -0.36
NUP98-220ENST00000533346 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
NUP98-220ENST00000533346 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
NUP98-220ENST00000533346 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
NUP98-220ENST00000533346 CHMP4AQ9BY43 222 aa12.82□□□□□ -0.36
NUP98-220ENST00000533346 MBIPQ9NS73 344 aa12.82□□□□□ -0.36
NUP98-220ENST00000533346 MAP3K15Q6ZN16 1313 aa12.82□□□□□ -0.36
NUP98-220ENST00000533346 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
NUP98-220ENST00000533346 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
NUP98-220ENST00000533346 BRIP1Q9BX63 1249 aa12.81□□□□□ -0.36
NUP98-220ENST00000533346 DDX21Q9NR30 783 aaKnown RBP eCLIP12.81□□□□□ -0.36
NUP98-220ENST00000533346 CACNA1FO60840 1977 aa12.81□□□□□ -0.36
NUP98-220ENST00000533346 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
NUP98-220ENST00000533346 ANKRD36CQ5JPF3 1778 aa12.8□□□□□ -0.36
NUP98-220ENST00000533346 KLRG2A4D1S0 409 aaPredicted RBP12.8□□□□□ -0.36
NUP98-220ENST00000533346 CCER2I3L3R5 266 aa12.8□□□□□ -0.36
NUP98-220ENST00000533346 DPEP1P16444 411 aa12.8□□□□□ -0.36
NUP98-220ENST00000533346 PRR5LQ6MZQ0 368 aa12.8□□□□□ -0.36
NUP98-220ENST00000533346 PIM2Q9P1W9 311 aa12.8□□□□□ -0.36
NUP98-220ENST00000533346 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
NUP98-220ENST00000533346 ARFGEF2Q9Y6D5 1785 aa12.79□□□□□ -0.36
NUP98-220ENST00000533346 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
NUP98-220ENST00000533346 HLFQ16534 295 aa12.79□□□□□ -0.36
NUP98-220ENST00000533346 GIGYF2Q6Y7W6 1299 aaKnown RBP12.79□□□□□ -0.36
NUP98-220ENST00000533346 DBF4Q9UBU7 674 aaPredicted RBP12.79□□□□□ -0.36
NUP98-220ENST00000533346 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
NUP98-220ENST00000533346 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
NUP98-220ENST00000533346 PDE6BP35913 854 aa12.78□□□□□ -0.36
NUP98-220ENST00000533346 KRT24Q2M2I5 525 aa12.78□□□□□ -0.36
NUP98-220ENST00000533346 DUSP27Q5VZP5 1158 aa12.78□□□□□ -0.36
NUP98-220ENST00000533346 TPTE2Q6XPS3 522 aa12.78□□□□□ -0.36
NUP98-220ENST00000533346 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
NUP98-220ENST00000533346 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
NUP98-220ENST00000533346 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
NUP98-220ENST00000533346 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
NUP98-220ENST00000533346 MYL6BP14649 208 aa12.77□□□□□ -0.37
NUP98-220ENST00000533346 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.37
NUP98-220ENST00000533346 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.37
NUP98-220ENST00000533346 COL11A2P13942 1736 aaPredicted RBP12.76□□□□□ -0.37
NUP98-220ENST00000533346 H0YIN7 160 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 PROSER3Q2NL68 480 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 HSP90AB3PQ58FF7 597 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 COPS6Q7L5N1 327 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 CNBD1Q8NA66 436 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 NYXQ9GZU5 481 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 HYPKQ9NX55 129 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 RNF123Q5XPI4 1314 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 SBF1O95248 1867 aa12.76□□□□□ -0.37
NUP98-220ENST00000533346 CHRNA5P30532 468 aa12.75□□□□□ -0.37
NUP98-220ENST00000533346 ST5P78524 1137 aa12.75□□□□□ -0.37
NUP98-220ENST00000533346 PARP10Q53GL7 1025 aa12.75□□□□□ -0.37
NUP98-220ENST00000533346 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
NUP98-220ENST00000533346 PELP1Q8IZL8 1130 aaKnown RBP12.75□□□□□ -0.37
NUP98-220ENST00000533346 C8orf58Q8NAV2 365 aa12.75□□□□□ -0.37
NUP98-220ENST00000533346 ADCY9O60503 1353 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 SRGNP10124 158 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 SLC10A5Q5PT55 438 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 NBPF5PQ86XG9 351 aaPredicted RBP12.74□□□□□ -0.37
NUP98-220ENST00000533346 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 FAM9BQ8IZU0 186 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 PLBD2Q8NHP8 589 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 FER1L6Q2WGJ9 1857 aa12.74□□□□□ -0.37
NUP98-220ENST00000533346 UBN2Q6ZU65 1347 aa12.73□□□□□ -0.37
NUP98-220ENST00000533346 TRIM28Q13263 835 aaKnown RBP12.73□□□□□ -0.37
NUP98-220ENST00000533346 TCIRG1Q13488 830 aa12.73□□□□□ -0.37
NUP98-220ENST00000533346 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
NUP98-220ENST00000533346 ANKRD13DQ6ZTN6 518 aa12.73□□□□□ -0.37
NUP98-220ENST00000533346 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
NUP98-220ENST00000533346 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
NUP98-220ENST00000533346 MASTLQ96GX5 879 aa12.73□□□□□ -0.37
NUP98-220ENST00000533346 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
NUP98-220ENST00000533346 NTSR2O95665 410 aa12.72□□□□□ -0.37
NUP98-220ENST00000533346 ANXA1P04083 346 aa12.72□□□□□ -0.37
NUP98-220ENST00000533346 CRY2Q49AN0 593 aa12.72□□□□□ -0.37
NUP98-220ENST00000533346 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
NUP98-220ENST00000533346 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
NUP98-220ENST00000533346 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
NUP98-220ENST00000533346 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
NUP98-220ENST00000533346 DICER1Q9UPY3 1922 aaKnown RBP12.71□□□□□ -0.37
NUP98-220ENST00000533346 TSPYL6Q8N831 410 aa12.71□□□□□ -0.37
NUP98-220ENST00000533346 ISCA1Q9BUE6 129 aa12.71□□□□□ -0.37
NUP98-220ENST00000533346 TNRC6CQ9HCJ0 1690 aaKnown RBP12.7□□□□□ -0.38
NUP98-220ENST00000533346 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
NUP98-220ENST00000533346 VAMP4O75379 141 aa12.7□□□□□ -0.38
NUP98-220ENST00000533346 NPR1P16066 1061 aa12.7□□□□□ -0.38
NUP98-220ENST00000533346 HOXA10P31260 410 aaPredicted RBP12.7□□□□□ -0.38
NUP98-220ENST00000533346 GOLGA2Q08379 1002 aa12.7□□□□□ -0.38
NUP98-220ENST00000533346 TWISTNBQ3B726 338 aaPredicted RBP12.7□□□□□ -0.38
NUP98-220ENST00000533346 NLRP10Q86W26 655 aa12.7□□□□□ -0.38
NUP98-220ENST00000533346 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
NUP98-220ENST00000533346 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
NUP98-220ENST00000533346 CACNA1SQ13698 1873 aa12.7□□□□□ -0.38
NUP98-220ENST00000533346 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
NUP98-220ENST00000533346 LTBP3Q9NS15 1303 aa12.69□□□□□ -0.38
NUP98-220ENST00000533346 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms