RNA–Protein interactions for RNA: ENST00000533258.5

MMP8-206, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-206ENST00000533258 TRAF5O00463 557 aa11.89□□□□□ -0.51
MMP8-206ENST00000533258 HHIPL1Q96JK4 782 aa11.89□□□□□ -0.51
MMP8-206ENST00000533258 FLT4P35916 1363 aa11.89□□□□□ -0.51
MMP8-206ENST00000533258 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
MMP8-206ENST00000533258 ZIC5Q96T25 663 aa11.88□□□□□ -0.51
MMP8-206ENST00000533258 NARFQ9UHQ1 456 aa11.88□□□□□ -0.51
MMP8-206ENST00000533258 KIF24Q5T7B8 1368 aa11.88□□□□□ -0.51
MMP8-206ENST00000533258 SOS1Q07889 1333 aaPredicted RBP11.87□□□□□ -0.51
MMP8-206ENST00000533258 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
MMP8-206ENST00000533258 C7orf43Q8WVR3 580 aa11.87□□□□□ -0.51
MMP8-206ENST00000533258 BRIP1Q9BX63 1249 aa11.87□□□□□ -0.51
MMP8-206ENST00000533258 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
MMP8-206ENST00000533258 FZD9O00144 591 aa11.86□□□□□ -0.51
MMP8-206ENST00000533258 FYB1O15117 783 aa11.86□□□□□ -0.51
MMP8-206ENST00000533258 ARFGEF2Q9Y6D5 1785 aa11.86□□□□□ -0.51
MMP8-206ENST00000533258 ROCK2O75116 1388 aaKnown RBP11.85□□□□□ -0.51
MMP8-206ENST00000533258 PDE6BP35913 854 aa11.85□□□□□ -0.51
MMP8-206ENST00000533258 SOGA3Q5TF21 947 aa11.85□□□□□ -0.51
MMP8-206ENST00000533258 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
MMP8-206ENST00000533258 GPC2Q8N158 579 aa11.85□□□□□ -0.51
MMP8-206ENST00000533258 PUS7Q96PZ0 661 aaKnown RBP11.85□□□□□ -0.51
MMP8-206ENST00000533258 CNKSR1Q969H4 720 aa11.84□□□□□ -0.51
MMP8-206ENST00000533258 EYA1Q99502 592 aa11.84□□□□□ -0.51
MMP8-206ENST00000533258 HPS5Q9UPZ3 1129 aa11.84□□□□□ -0.51
MMP8-206ENST00000533258 COL6A3P12111 3177 aa11.83□□□□□ -0.51
MMP8-206ENST00000533258 NOGQ13253 232 aa11.83□□□□□ -0.52
MMP8-206ENST00000533258 STYK1Q6J9G0 422 aa11.83□□□□□ -0.52
MMP8-206ENST00000533258 CTU1Q7Z7A3 348 aaKnown RBP11.83□□□□□ -0.52
MMP8-206ENST00000533258 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
MMP8-206ENST00000533258 ZNF277Q9NRM2 450 aaPredicted RBP11.83□□□□□ -0.52
MMP8-206ENST00000533258 SAGE1Q9NXZ1 904 aa11.83□□□□□ -0.52
MMP8-206ENST00000533258 COL15A1P39059 1388 aa11.82□□□□□ -0.52
MMP8-206ENST00000533258 SRGNP10124 158 aa11.82□□□□□ -0.52
MMP8-206ENST00000533258 EPS15P42566 896 aa11.82□□□□□ -0.52
MMP8-206ENST00000533258 FKBP4Q02790 459 aaKnown RBP eCLIP11.82□□□□□ -0.52
MMP8-206ENST00000533258 PRR5LQ6MZQ0 368 aa11.82□□□□□ -0.52
MMP8-206ENST00000533258 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
MMP8-206ENST00000533258 CELF2O95319 508 aaKnown RBP11.81□□□□□ -0.52
MMP8-206ENST00000533258 SCNN1DP51172 638 aa11.81□□□□□ -0.52
MMP8-206ENST00000533258 CABP4P57796 275 aa11.81□□□□□ -0.52
MMP8-206ENST00000533258 BICDL1Q6ZP65 573 aa11.81□□□□□ -0.52
MMP8-206ENST00000533258 DNAJC10Q8IXB1 793 aa11.81□□□□□ -0.52
MMP8-206ENST00000533258 L3MBTL2Q969R5 705 aa11.81□□□□□ -0.52
MMP8-206ENST00000533258 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
MMP8-206ENST00000533258 HSP90AB1P08238 724 aaKnown RBP11.8□□□□□ -0.52
MMP8-206ENST00000533258 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
MMP8-206ENST00000533258 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
MMP8-206ENST00000533258 USP50Q70EL3 339 aaPredicted RBP11.8□□□□□ -0.52
MMP8-206ENST00000533258 SLC17A8Q8NDX2 589 aa11.8□□□□□ -0.52
MMP8-206ENST00000533258 TBC1D9BQ66K14 1250 aa11.79□□□□□ -0.52
MMP8-206ENST00000533258 NFATC2IPQ8NCF5 419 aa11.79□□□□□ -0.52
MMP8-206ENST00000533258 MASTLQ96GX5 879 aa11.79□□□□□ -0.52
MMP8-206ENST00000533258 RNF186Q9NXI6 227 aa11.79□□□□□ -0.52
MMP8-206ENST00000533258 TRIOBPQ9H2D6 2365 aa11.79□□□□□ -0.52
MMP8-206ENST00000533258 BCORQ6W2J9 1755 aa11.78□□□□□ -0.52
MMP8-206ENST00000533258 SCN11AQ9UI33 1791 aa11.78□□□□□ -0.52
MMP8-206ENST00000533258 FAM155AB1AL88 458 aaPredicted RBP11.78□□□□□ -0.52
MMP8-206ENST00000533258 TRPA1O75762 1119 aa11.78□□□□□ -0.52
MMP8-206ENST00000533258 IARSP41252 1262 aaKnown RBP11.78□□□□□ -0.52
MMP8-206ENST00000533258 AKAP4Q5JQC9 854 aa11.78□□□□□ -0.52
MMP8-206ENST00000533258 OLFM4Q6UX06 510 aa11.78□□□□□ -0.52
MMP8-206ENST00000533258 ZBTB1Q9Y2K1 713 aa11.78□□□□□ -0.52
MMP8-206ENST00000533258 AKAP11Q9UKA4 1901 aa11.78□□□□□ -0.52
MMP8-206ENST00000533258 COL4A5P29400 1685 aa11.78□□□□□ -0.52
MMP8-206ENST00000533258 SPDYE4A6NLX3 237 aa11.77□□□□□ -0.53
MMP8-206ENST00000533258 LMOD1P29536 600 aaPredicted RBP11.77□□□□□ -0.53
MMP8-206ENST00000533258 PKN2Q16513 984 aaKnown RBP11.77□□□□□ -0.53
MMP8-206ENST00000533258 WASHC2AQ641Q2 1341 aa11.77□□□□□ -0.53
MMP8-206ENST00000533258 ANKRD26Q9UPS8 1709 aa11.77□□□□□ -0.53
MMP8-206ENST00000533258 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
MMP8-206ENST00000533258 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
MMP8-206ENST00000533258 SPDYE2Q495Y8 402 aa11.76□□□□□ -0.53
MMP8-206ENST00000533258 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
MMP8-206ENST00000533258 GLIS2Q9BZE0 524 aaPredicted RBP11.76□□□□□ -0.53
MMP8-206ENST00000533258 PGAP2Q9UHJ9 254 aa11.76□□□□□ -0.53
MMP8-206ENST00000533258 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
MMP8-206ENST00000533258 GJA3Q9Y6H8 435 aa11.76□□□□□ -0.53
MMP8-206ENST00000533258 HTTP42858 3142 aa11.75□□□□□ -0.53
MMP8-206ENST00000533258 SYNE4Q8N205 404 aa11.75□□□□□ -0.53
MMP8-206ENST00000533258 SNED1Q8TER0 1413 aa11.75□□□□□ -0.53
MMP8-206ENST00000533258 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
MMP8-206ENST00000533258 KIF23Q02241 960 aaPredicted RBP11.74□□□□□ -0.53
MMP8-206ENST00000533258 CENPFP49454 3210 aa11.73□□□□□ -0.53
MMP8-206ENST00000533258 ST20-MTHFSA0A0A6YYL1 179 aa11.73□□□□□ -0.53
MMP8-206ENST00000533258 PPM1GO15355 546 aaPredicted RBP11.73□□□□□ -0.53
MMP8-206ENST00000533258 MTHFSP49914 203 aa11.73□□□□□ -0.53
MMP8-206ENST00000533258 EIF6P56537 245 aaKnown RBP11.73□□□□□ -0.53
MMP8-206ENST00000533258 HUNKP57058 714 aa11.73□□□□□ -0.53
MMP8-206ENST00000533258 ZNF530Q6P9A1 599 aaPredicted RBP11.73□□□□□ -0.53
MMP8-206ENST00000533258 CNBD1Q8NA66 436 aa11.73□□□□□ -0.53
MMP8-206ENST00000533258 JDP2Q8WYK2 163 aa11.73□□□□□ -0.53
MMP8-206ENST00000533258 PITPNM2Q9BZ72 1349 aa11.73□□□□□ -0.53
MMP8-206ENST00000533258 BRCA2P51587 3418 aa11.73□□□□□ -0.53
MMP8-206ENST00000533258 KIF20BQ96Q89 1820 aa11.72□□□□□ -0.53
MMP8-206ENST00000533258 RANBP2P49792 3224 aaKnown RBP11.72□□□□□ -0.53
MMP8-206ENST00000533258 KLRG2A4D1S0 409 aaPredicted RBP11.72□□□□□ -0.53
MMP8-206ENST00000533258 CSRNP1Q96S65 589 aa11.72□□□□□ -0.53
MMP8-206ENST00000533258 PSMD1Q99460 953 aa11.72□□□□□ -0.53
MMP8-206ENST00000533258 ZNF408Q9H9D4 720 aa11.72□□□□□ -0.53
MMP8-206ENST00000533258 ADARB2Q9NS39 739 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms