RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CHRNA5P30532 468 aa16.83■□□□□ 0.28
TRAPPC4-212ENST00000533058 PDIA6Q15084 440 aa16.83■□□□□ 0.28
TRAPPC4-212ENST00000533058 LRP10Q7Z4F1 713 aa16.83■□□□□ 0.28
TRAPPC4-212ENST00000533058 AFDNP55196 1824 aaKnown RBP16.82■□□□□ 0.28
TRAPPC4-212ENST00000533058 N4BP2Q86UW6 1770 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC4-212ENST00000533058 MAP3K15Q6ZN16 1313 aa16.82■□□□□ 0.28
TRAPPC4-212ENST00000533058 PDE6BP35913 854 aa16.82■□□□□ 0.28
TRAPPC4-212ENST00000533058 CCDC27Q2M243 656 aa16.82■□□□□ 0.28
TRAPPC4-212ENST00000533058 IFT57Q9NWB7 429 aa16.82■□□□□ 0.28
TRAPPC4-212ENST00000533058 WWC3Q9ULE0 1092 aa16.82■□□□□ 0.28
TRAPPC4-212ENST00000533058 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
TRAPPC4-212ENST00000533058 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
TRAPPC4-212ENST00000533058 H0YIN7 160 aa16.81■□□□□ 0.28
TRAPPC4-212ENST00000533058 GNAI1P63096 354 aa16.81■□□□□ 0.28
TRAPPC4-212ENST00000533058 HLFQ16534 295 aa16.81■□□□□ 0.28
TRAPPC4-212ENST00000533058 CNBD1Q8NA66 436 aa16.81■□□□□ 0.28
TRAPPC4-212ENST00000533058 NIP7Q9Y221 180 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRAPPC4-212ENST00000533058 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
TRAPPC4-212ENST00000533058 MYL6BP14649 208 aa16.8■□□□□ 0.28
TRAPPC4-212ENST00000533058 EIF2S2P20042 333 aaKnown RBP16.8■□□□□ 0.28
TRAPPC4-212ENST00000533058 TPTE2Q6XPS3 522 aa16.8■□□□□ 0.28
TRAPPC4-212ENST00000533058 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
TRAPPC4-212ENST00000533058 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC4-212ENST00000533058 C2CD5Q86YS7 1000 aa16.8■□□□□ 0.28
TRAPPC4-212ENST00000533058 ADCY9O60503 1353 aa16.79■□□□□ 0.28
TRAPPC4-212ENST00000533058 ST5P78524 1137 aa16.79■□□□□ 0.28
TRAPPC4-212ENST00000533058 TTLL7Q6ZT98 887 aa16.79■□□□□ 0.28
TRAPPC4-212ENST00000533058 TTLL6Q8N841 843 aa16.79■□□□□ 0.28
TRAPPC4-212ENST00000533058 MBIPQ9NS73 344 aa16.79■□□□□ 0.28
TRAPPC4-212ENST00000533058 ATP10DQ9P241 1426 aa16.79■□□□□ 0.28
TRAPPC4-212ENST00000533058 KLRG2A4D1S0 409 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC4-212ENST00000533058 GIGYF2Q6Y7W6 1299 aaKnown RBP16.78■□□□□ 0.28
TRAPPC4-212ENST00000533058 ARHGAP27Q6ZUM4 889 aa16.78■□□□□ 0.28
TRAPPC4-212ENST00000533058 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
TRAPPC4-212ENST00000533058 DDX21Q9NR30 783 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRAPPC4-212ENST00000533058 NPHP1O15259 732 aa16.77■□□□□ 0.28
TRAPPC4-212ENST00000533058 KRT24Q2M2I5 525 aa16.77■□□□□ 0.28
TRAPPC4-212ENST00000533058 WWC1Q8IX03 1113 aa16.77■□□□□ 0.28
TRAPPC4-212ENST00000533058 ARFGEF1Q9Y6D6 1849 aa16.76■□□□□ 0.27
TRAPPC4-212ENST00000533058 SRGNP10124 158 aa16.76■□□□□ 0.27
TRAPPC4-212ENST00000533058 PROSER3Q2NL68 480 aa16.76■□□□□ 0.27
TRAPPC4-212ENST00000533058 HDGFL1Q5TGJ6 251 aa16.76■□□□□ 0.27
TRAPPC4-212ENST00000533058 DUSP27Q5VZP5 1158 aa16.76■□□□□ 0.27
TRAPPC4-212ENST00000533058 STYK1Q6J9G0 422 aa16.76■□□□□ 0.27
TRAPPC4-212ENST00000533058 ZNF34Q8IZ26 560 aa16.76■□□□□ 0.27
TRAPPC4-212ENST00000533058 NYXQ9GZU5 481 aa16.76■□□□□ 0.27
TRAPPC4-212ENST00000533058 IBTKQ9P2D0 1353 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC4-212ENST00000533058 HNRNPUQ00839 825 aaKnown RBP eCLIP16.75■□□□□ 0.27
TRAPPC4-212ENST00000533058 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
TRAPPC4-212ENST00000533058 ZBTB3Q9H5J0 574 aa16.75■□□□□ 0.27
TRAPPC4-212ENST00000533058 DBF4Q9UBU7 674 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC4-212ENST00000533058 PARP10Q53GL7 1025 aa16.74■□□□□ 0.27
TRAPPC4-212ENST00000533058 COPS6Q7L5N1 327 aa16.74■□□□□ 0.27
TRAPPC4-212ENST00000533058 CCDC24Q8N4L8 307 aa16.74■□□□□ 0.27
TRAPPC4-212ENST00000533058 CNKSR1Q969H4 720 aa16.74■□□□□ 0.27
TRAPPC4-212ENST00000533058 MASTLQ96GX5 879 aa16.74■□□□□ 0.27
TRAPPC4-212ENST00000533058 IL16Q14005 1332 aa16.73■□□□□ 0.27
TRAPPC4-212ENST00000533058 ANXA1P04083 346 aa16.73■□□□□ 0.27
TRAPPC4-212ENST00000533058 HSP90AB3PQ58FF7 597 aa16.73■□□□□ 0.27
TRAPPC4-212ENST00000533058 XAGE3Q8WTP9 111 aa16.73■□□□□ 0.27
TRAPPC4-212ENST00000533058 ZNF622Q969S3 477 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRAPPC4-212ENST00000533058 DLEC1Q9Y238 1755 aa16.73■□□□□ 0.27
TRAPPC4-212ENST00000533058 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
TRAPPC4-212ENST00000533058 UBN2Q6ZU65 1347 aa16.72■□□□□ 0.27
TRAPPC4-212ENST00000533058 RIC1Q4ADV7 1423 aa16.72■□□□□ 0.27
TRAPPC4-212ENST00000533058 NPR1P16066 1061 aa16.72■□□□□ 0.27
TRAPPC4-212ENST00000533058 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC4-212ENST00000533058 HYPKQ9NX55 129 aa16.72■□□□□ 0.27
TRAPPC4-212ENST00000533058 CHPF2Q9P2E5 772 aa16.72■□□□□ 0.27
TRAPPC4-212ENST00000533058 RNF123Q5XPI4 1314 aa16.71■□□□□ 0.27
TRAPPC4-212ENST00000533058 CRY2Q49AN0 593 aa16.71■□□□□ 0.27
TRAPPC4-212ENST00000533058 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
TRAPPC4-212ENST00000533058 WDR63Q8IWG1 891 aa16.71■□□□□ 0.27
TRAPPC4-212ENST00000533058 NECTIN2Q92692 538 aa16.71■□□□□ 0.27
TRAPPC4-212ENST00000533058 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
TRAPPC4-212ENST00000533058 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
TRAPPC4-212ENST00000533058 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
TRAPPC4-212ENST00000533058 NUP98P52948 1817 aa16.7■□□□□ 0.26
TRAPPC4-212ENST00000533058 FAM177BA6PVY3 158 aa16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 NTSR2O95665 410 aa16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 GPTP24298 496 aa16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 AIMP1Q12904 312 aaKnown RBP16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 SLC10A5Q5PT55 438 aa16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 SOGA3Q5TF21 947 aa16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 ANKRD13DQ6ZTN6 518 aa16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 GPBP1L1Q9HC44 474 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 ZC3H4Q9UPT8 1303 aaKnown RBP16.69■□□□□ 0.26
TRAPPC4-212ENST00000533058 ALDH1B1P30837 517 aa16.68■□□□□ 0.26
TRAPPC4-212ENST00000533058 ERFEQ4G0M1 354 aa16.68■□□□□ 0.26
TRAPPC4-212ENST00000533058 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
TRAPPC4-212ENST00000533058 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
TRAPPC4-212ENST00000533058 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
TRAPPC4-212ENST00000533058 TSR2Q969E8 191 aaKnown RBP16.68■□□□□ 0.26
TRAPPC4-212ENST00000533058 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
TRAPPC4-212ENST00000533058 LTBP3Q9NS15 1303 aa16.68■□□□□ 0.26
TRAPPC4-212ENST00000533058 C21orf2O43822 256 aa16.67■□□□□ 0.26
TRAPPC4-212ENST00000533058 LMNB1P20700 586 aa16.67■□□□□ 0.26
TRAPPC4-212ENST00000533058 HOXA10P31260 410 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms