RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 NBPF5PQ86XG9 351 aaPredicted RBP12.55□□□□□ -0.4
SYVN1-214ENST00000532771 NMRK2Q9NPI5 230 aa12.55□□□□□ -0.4
SYVN1-214ENST00000532771 BABAM1Q9NWV8 329 aa12.55□□□□□ -0.4
SYVN1-214ENST00000532771 NIP7Q9Y221 180 aaKnown RBP eCLIP12.55□□□□□ -0.4
SYVN1-214ENST00000532771 SBF1O95248 1867 aa12.55□□□□□ -0.4
SYVN1-214ENST00000532771 SRGNP10124 158 aa12.54□□□□□ -0.4
SYVN1-214ENST00000532771 LMNB1P20700 586 aa12.54□□□□□ -0.4
SYVN1-214ENST00000532771 STYK1Q6J9G0 422 aa12.54□□□□□ -0.4
SYVN1-214ENST00000532771 PRKRIP1Q9H875 184 aaPredicted RBP12.54□□□□□ -0.4
SYVN1-214ENST00000532771 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
SYVN1-214ENST00000532771 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
SYVN1-214ENST00000532771 ZC3H4Q9UPT8 1303 aaKnown RBP12.54□□□□□ -0.4
SYVN1-214ENST00000532771 ERVV-1B6SEH8 477 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 NFKBIEO00221 500 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 PRELPP51888 382 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.4
SYVN1-214ENST00000532771 HLFQ16534 295 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 TPTE2Q6XPS3 522 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 CCDC146Q8IYE0 955 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 CNKSR1Q969H4 720 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
SYVN1-214ENST00000532771 MAP3K15Q6ZN16 1313 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 KDM2BQ8NHM5 1336 aa12.53□□□□□ -0.4
SYVN1-214ENST00000532771 KLRG2A4D1S0 409 aaPredicted RBP12.52□□□□□ -0.41
SYVN1-214ENST00000532771 C21orf2O43822 256 aa12.52□□□□□ -0.41
SYVN1-214ENST00000532771 TOMM70O94826 608 aa12.52□□□□□ -0.41
SYVN1-214ENST00000532771 HSPA6P17066 643 aa12.52□□□□□ -0.41
SYVN1-214ENST00000532771 TTLL7Q6ZT98 887 aa12.52□□□□□ -0.41
SYVN1-214ENST00000532771 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
SYVN1-214ENST00000532771 MYL6BP14649 208 aa12.51□□□□□ -0.41
SYVN1-214ENST00000532771 NEUROD2Q15784 382 aa12.51□□□□□ -0.41
SYVN1-214ENST00000532771 PRPF40BQ6NWY9 871 aaKnown RBP12.51□□□□□ -0.41
SYVN1-214ENST00000532771 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
SYVN1-214ENST00000532771 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
SYVN1-214ENST00000532771 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
SYVN1-214ENST00000532771 PDIA6Q15084 440 aa12.5□□□□□ -0.41
SYVN1-214ENST00000532771 SOGA3Q5TF21 947 aa12.5□□□□□ -0.41
SYVN1-214ENST00000532771 LRP10Q7Z4F1 713 aa12.5□□□□□ -0.41
SYVN1-214ENST00000532771 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
SYVN1-214ENST00000532771 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
SYVN1-214ENST00000532771 LTBP3Q9NS15 1303 aa12.5□□□□□ -0.41
SYVN1-214ENST00000532771 SLX4Q8IY92 1834 aa12.5□□□□□ -0.41
SYVN1-214ENST00000532771 IBTKQ9P2D0 1353 aaPredicted RBP12.49□□□□□ -0.41
SYVN1-214ENST00000532771 CHL1O00533 1208 aa12.49□□□□□ -0.41
SYVN1-214ENST00000532771 NPR1P16066 1061 aa12.49□□□□□ -0.41
SYVN1-214ENST00000532771 EIF2S2P20042 333 aaKnown RBP12.49□□□□□ -0.41
SYVN1-214ENST00000532771 RBM46Q8TBY0 533 aaKnown RBP12.49□□□□□ -0.41
SYVN1-214ENST00000532771 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
SYVN1-214ENST00000532771 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
SYVN1-214ENST00000532771 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
SYVN1-214ENST00000532771 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
SYVN1-214ENST00000532771 NUP98P52948 1817 aa12.48□□□□□ -0.41
SYVN1-214ENST00000532771 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
SYVN1-214ENST00000532771 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
SYVN1-214ENST00000532771 UBN2Q6ZU65 1347 aa12.48□□□□□ -0.41
SYVN1-214ENST00000532771 GLTPD2A6NH11 291 aa12.48□□□□□ -0.41
SYVN1-214ENST00000532771 GTF2E1P29083 439 aaPredicted RBP12.48□□□□□ -0.41
SYVN1-214ENST00000532771 GIGYF2Q6Y7W6 1299 aaKnown RBP12.48□□□□□ -0.41
SYVN1-214ENST00000532771 ZNF34Q8IZ26 560 aa12.48□□□□□ -0.41
SYVN1-214ENST00000532771 C7orf43Q8WVR3 580 aa12.48□□□□□ -0.41
SYVN1-214ENST00000532771 RRAGCQ9HB90 399 aa12.48□□□□□ -0.41
SYVN1-214ENST00000532771 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
SYVN1-214ENST00000532771 GPTP24298 496 aa12.47□□□□□ -0.41
SYVN1-214ENST00000532771 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
SYVN1-214ENST00000532771 CRY2Q49AN0 593 aa12.47□□□□□ -0.41
SYVN1-214ENST00000532771 ERFEQ4G0M1 354 aa12.47□□□□□ -0.41
SYVN1-214ENST00000532771 NUTM1Q86Y26 1132 aa12.47□□□□□ -0.41
SYVN1-214ENST00000532771 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
SYVN1-214ENST00000532771 TIAM2Q8IVF5 1701 aa12.47□□□□□ -0.41
SYVN1-214ENST00000532771 CCDC88AQ3V6T2 1871 aa12.46□□□□□ -0.41
SYVN1-214ENST00000532771 RIC1Q4ADV7 1423 aa12.46□□□□□ -0.41
SYVN1-214ENST00000532771 ANXA1P04083 346 aa12.46□□□□□ -0.41
SYVN1-214ENST00000532771 ALDH1B1P30837 517 aa12.46□□□□□ -0.41
SYVN1-214ENST00000532771 ZEB1P37275 1124 aaPredicted RBP12.46□□□□□ -0.41
SYVN1-214ENST00000532771 KRT24Q2M2I5 525 aa12.46□□□□□ -0.41
SYVN1-214ENST00000532771 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
SYVN1-214ENST00000532771 SUSD4Q5VX71 490 aa12.46□□□□□ -0.41
SYVN1-214ENST00000532771 CACNA1SQ13698 1873 aa12.46□□□□□ -0.42
SYVN1-214ENST00000532771 NTSR2O95665 410 aa12.45□□□□□ -0.42
SYVN1-214ENST00000532771 APLP1P51693 650 aa12.45□□□□□ -0.42
SYVN1-214ENST00000532771 FSTL1Q12841 308 aa12.45□□□□□ -0.42
SYVN1-214ENST00000532771 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
SYVN1-214ENST00000532771 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
SYVN1-214ENST00000532771 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
SYVN1-214ENST00000532771 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
SYVN1-214ENST00000532771 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
SYVN1-214ENST00000532771 HOXB7P09629 217 aa12.44□□□□□ -0.42
SYVN1-214ENST00000532771 VEGFAP15692 232 aaPredicted RBP12.44□□□□□ -0.42
SYVN1-214ENST00000532771 COPS6Q7L5N1 327 aa12.44□□□□□ -0.42
SYVN1-214ENST00000532771 PPP1R42Q7Z4L9 355 aa12.44□□□□□ -0.42
SYVN1-214ENST00000532771 NECTIN2Q92692 538 aa12.44□□□□□ -0.42
SYVN1-214ENST00000532771 DDX21Q9NR30 783 aaKnown RBP eCLIP12.44□□□□□ -0.42
SYVN1-214ENST00000532771 APAF1O14727 1248 aa12.43□□□□□ -0.42
SYVN1-214ENST00000532771 HOXA10P31260 410 aaPredicted RBP12.43□□□□□ -0.42
SYVN1-214ENST00000532771 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
SYVN1-214ENST00000532771 HSP90AB3PQ58FF7 597 aa12.43□□□□□ -0.42
SYVN1-214ENST00000532771 OLFM4Q6UX06 510 aa12.43□□□□□ -0.42
SYVN1-214ENST00000532771 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms