RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PIP4K2AP48426 406 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-221ENST00000532331 IL16Q14005 1332 aa13.29□□□□□ -0.28
PTPRK-221ENST00000532331 TRAK2O60296 914 aa13.29□□□□□ -0.28
PTPRK-221ENST00000532331 NASPP49321 788 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-221ENST00000532331 CNBD1Q8NA66 436 aa13.29□□□□□ -0.28
PTPRK-221ENST00000532331 IBSPP21815 317 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-221ENST00000532331 CUL5Q93034 780 aa13.29□□□□□ -0.28
PTPRK-221ENST00000532331 F8W031 263 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 RNMTO43148 476 aaKnown RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 HSP90AA2PQ14568 343 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 CAVIN1Q6NZI2 390 aaKnown RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 ASXL1Q8IXJ9 1541 aa13.28□□□□□ -0.28
PTPRK-221ENST00000532331 PRPF40AO75400 957 aaKnown RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 A0A1W2PP64 1363 aa13.28□□□□□ -0.28
PTPRK-221ENST00000532331 CCDC39Q9UFE4 941 aa13.28□□□□□ -0.28
PTPRK-221ENST00000532331 FIBPO43427 364 aa13.28□□□□□ -0.28
PTPRK-221ENST00000532331 MNS1Q8NEH6 495 aa13.28□□□□□ -0.28
PTPRK-221ENST00000532331 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 FILIP1LQ4L180 1135 aa13.28□□□□□ -0.28
PTPRK-221ENST00000532331 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
PTPRK-221ENST00000532331 PDRG1Q9NUG6 133 aa13.28□□□□□ -0.28
PTPRK-221ENST00000532331 RNF214Q8ND24 703 aa13.27□□□□□ -0.28
PTPRK-221ENST00000532331 CTCFLQ8NI51 663 aaPredicted RBP13.27□□□□□ -0.28
PTPRK-221ENST00000532331 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.29
PTPRK-221ENST00000532331 ZFYVE9O95405 1425 aa13.27□□□□□ -0.29
PTPRK-221ENST00000532331 SMARCA5O60264 1052 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-221ENST00000532331 KSR2Q6VAB6 950 aa13.27□□□□□ -0.29
PTPRK-221ENST00000532331 SCLT1Q96NL6 688 aa13.27□□□□□ -0.29
PTPRK-221ENST00000532331 TRIM5Q9C035 493 aa13.27□□□□□ -0.29
PTPRK-221ENST00000532331 MAGEC2Q9UBF1 373 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-221ENST00000532331 TSPY26PQ9H489 355 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 MYO5CQ9NQX4 1742 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 WDR33Q9C0J8 1336 aaKnown RBP13.26□□□□□ -0.29
PTPRK-221ENST00000532331 PIK3C2GO75747 1445 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 K7ELQ4 463 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-221ENST00000532331 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
PTPRK-221ENST00000532331 CRNKL1Q9BZJ0 848 aaKnown RBP13.26□□□□□ -0.29
PTPRK-221ENST00000532331 EHMT1Q9H9B1 1298 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 CCDC87Q9NVE4 849 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 ZNF213O14771 459 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 SNRKQ9NRH2 765 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-221ENST00000532331 PDE4BQ07343 736 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 COL17A1Q9UMD9 1497 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-221ENST00000532331 FAM43AQ8N2R8 423 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 VEZTQ9HBM0 779 aa13.26□□□□□ -0.29
PTPRK-221ENST00000532331 IRS4O14654 1257 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-221ENST00000532331 SSBP05455 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTPRK-221ENST00000532331 SBNO1A3KN83 1393 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 GOLIM4O00461 696 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 MATR3P43243 847 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■■■□□ 19
PTPRK-221ENST00000532331 ZSCAN31Q96LW9 406 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-221ENST00000532331 KAT6BQ8WYB5 2073 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 RIMBP2O15034 1052 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 EDC4Q6P2E9 1401 aaKnown RBP13.25□□□□□ -0.29
PTPRK-221ENST00000532331 MPHOSPH6Q99547 160 aaKnown RBP13.25□□□□□ -0.29
PTPRK-221ENST00000532331 ANKRD2Q9GZV1 360 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 ARGLU1Q9NWB6 273 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-221ENST00000532331 GJA3Q9Y6H8 435 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 SMC2O95347 1197 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 PAF1Q8N7H5 531 aa13.25□□□□□ -0.29
PTPRK-221ENST00000532331 H0YIN7 160 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 ATP2B3Q16720 1220 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 ZFYVE27Q5T4F4 411 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 BACH2Q9BYV9 841 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 LARP1BQ659C4 914 aaKnown RBP13.24□□□□□ -0.29
PTPRK-221ENST00000532331 RUFY1Q96T51 708 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 CCDC173Q0VFZ6 552 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 LMBR1LQ6UX01 489 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 KDM6BO15054 1643 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 KRT85P78386 507 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 GPR162Q16538 588 aa13.24□□□□□ -0.29
PTPRK-221ENST00000532331 SAMD9Q5K651 1589 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 GRM8O00222 908 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 PPP4R3AQ6IN85 833 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 ACBD3Q9H3P7 528 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 CDR1P51861 262 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 SETQ01105 290 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-221ENST00000532331 TEX35Q5T0J7 233 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 FLAD1Q8NFF5 587 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 ECHDC1Q9NTX5 307 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 ADGRL2O95490 1459 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 PLEKHG1Q9ULL1 1385 aa13.23□□□□□ -0.29
PTPRK-221ENST00000532331 IQSEC3Q9UPP2 1182 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-221ENST00000532331 TSPY2A6NKD2 308 aa13.22□□□□□ -0.29
PTPRK-221ENST00000532331 ME1P48163 572 aa13.22□□□□□ -0.29
PTPRK-221ENST00000532331 PARP10Q53GL7 1025 aa13.22□□□□□ -0.29
PTPRK-221ENST00000532331 EFCAB6Q5THR3 1501 aa13.22□□□□□ -0.29
PTPRK-221ENST00000532331 SYCP1Q15431 976 aa13.22□□□□□ -0.29
PTPRK-221ENST00000532331 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRK-221ENST00000532331 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms