RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.62□□□□□ -0.871e-10■■□□□ 13.5
CSDE1-214ENST00000530886 C1orf115Q9H7X2 142 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 ATP6V1DQ9Y5K8 247 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 ABCC3O15438 1527 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 NRKQ7Z2Y5 1582 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 CAVIN2O95810 425 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 LRRC8AQ8IWT6 810 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 DEF6Q9H4E7 631 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 CXorf56Q9H5V9 222 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 MRVI1Q9Y6F6 885 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 RGPD1P0DJD0 1748 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 TPM1P09493 284 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 KCNJ6P48051 423 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 SRPK2P78362 688 aaKnown RBP9.61□□□□□ -0.87
CSDE1-214ENST00000530886 TRDNQ13061 729 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 MYO5BQ9ULV0 1848 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 ZSCAN22P10073 491 aaPredicted RBP9.61□□□□□ -0.87
CSDE1-214ENST00000530886 ACTN2P35609 894 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 NEK4P51957 841 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 PPM1EQ8WY54 764 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 CFAP53Q96M91 514 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 GDPD2Q9HCC8 539 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 RAI14Q9P0K7 980 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 ST5P78524 1137 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 FOXD4L5Q5VV16 416 aaPredicted RBP9.61□□□□□ -0.87
CSDE1-214ENST00000530886 MCTP2Q6DN12 878 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 TMCO3Q6UWJ1 677 aa9.61□□□□□ -0.87
CSDE1-214ENST00000530886 MSL3Q8N5Y2 521 aaKnown RBP9.61□□□□□ -0.87
CSDE1-214ENST00000530886 FOXD4L4Q8WXT5 416 aaPredicted RBP9.61□□□□□ -0.87
CSDE1-214ENST00000530886 TACO1Q9BSH4 297 aaKnown RBP9.61□□□□□ -0.87
CSDE1-214ENST00000530886 U2SURPO15042 1029 aaKnown RBP9.6□□□□□ -0.87
CSDE1-214ENST00000530886 HSP90AB3PQ58FF7 597 aa9.6□□□□□ -0.87
CSDE1-214ENST00000530886 MRFAP1L1Q96HT8 127 aa9.6□□□□□ -0.87
CSDE1-214ENST00000530886 TMX1Q9H3N1 280 aa9.6□□□□□ -0.87
CSDE1-214ENST00000530886 CNPY2Q9Y2B0 182 aa9.6□□□□□ -0.87
CSDE1-214ENST00000530886 A0A1W2PP64 1363 aa9.6□□□□□ -0.87
CSDE1-214ENST00000530886 FAM208AQ9UK61 1670 aaKnown RBP9.6□□□□□ -0.87
CSDE1-214ENST00000530886 CCAR2Q8N163 923 aaKnown RBP9.6□□□□□ -0.87
CSDE1-214ENST00000530886 TTC21BQ7Z4L5 1316 aa9.6□□□□□ -0.87
CSDE1-214ENST00000530886 CCDC196A0A1B0GTZ2 297 aa9.59□□□□□ -0.87
CSDE1-214ENST00000530886 NRBP1Q9UHY1 535 aa9.59□□□□□ -0.87
CSDE1-214ENST00000530886 TSPYL6Q8N831 410 aa9.59□□□□□ -0.87
CSDE1-214ENST00000530886 ORC3Q9UBD5 711 aaPredicted RBP9.59□□□□□ -0.87
CSDE1-214ENST00000530886 CPSF1Q10570 1443 aaKnown RBP9.59□□□□□ -0.87
CSDE1-214ENST00000530886 YTHDC2Q9H6S0 1430 aaKnown RBP9.59□□□□□ -0.87
CSDE1-214ENST00000530886 CORO7P57737 925 aa9.59□□□□□ -0.87
CSDE1-214ENST00000530886 PLCB2Q00722 1185 aa9.59□□□□□ -0.87
CSDE1-214ENST00000530886 TYRO3Q06418 890 aa9.59□□□□□ -0.87
CSDE1-214ENST00000530886 MMS22LQ6ZRQ5 1243 aa9.59□□□□□ -0.87
CSDE1-214ENST00000530886 SRRTQ9BXP5 876 aaKnown RBP9.59□□□□□ -0.87
CSDE1-214ENST00000530886 PALD1Q9ULE6 856 aa9.59□□□□□ -0.87
CSDE1-214ENST00000530886 EXOC6BQ9Y2D4 811 aa9.59□□□□□ -0.87
CSDE1-214ENST00000530886 PTPRMP28827 1452 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 ERCC6LQ2NKX8 1250 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 ZSCAN16Q9H4T2 348 aaPredicted RBP9.58□□□□□ -0.88
CSDE1-214ENST00000530886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.58□□□□□ -0.884e-11■□□□□ 9.7
CSDE1-214ENST00000530886 CCDC189A1A4V9 331 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 USP27XA6NNY8 438 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 F13A1P00488 732 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 MCCP23508 829 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 OAS2P29728 719 aaKnown RBP9.58□□□□□ -0.88
CSDE1-214ENST00000530886 CCZ1BP86790 482 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 CCZ1P86791 482 aaPredicted RBP9.58□□□□□ -0.88
CSDE1-214ENST00000530886 MAP3K11Q16584 847 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 CCDC144BQ3MJ40 725 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 CCDC158Q5M9N0 1113 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 CCDC144CPQ8IYA2 1237 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 C14orf93Q9H972 538 aaKnown RBP9.58□□□□□ -0.88
CSDE1-214ENST00000530886 CBX8Q9HC52 389 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 CLIP2Q9UDT6 1046 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.58□□□□□ -0.88
CSDE1-214ENST00000530886 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
CSDE1-214ENST00000530886 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
CSDE1-214ENST00000530886 ZNF592Q92610 1267 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 DRC1Q96MC2 740 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 MKRN1Q9UHC7 482 aaKnown RBP9.58□□□□□ -0.88
CSDE1-214ENST00000530886 ERCC6L2Q5T890 1561 aa9.58□□□□□ -0.88
CSDE1-214ENST00000530886 CHD1O14646 1710 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 TBC1D8O95759 1140 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 SUFUQ9UMX1 484 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 CACNA1FO60840 1977 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
CSDE1-214ENST00000530886 ATP6V1AP38606 617 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 ANKRD44Q8N8A2 993 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 MSH6P52701 1360 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 DHX8Q14562 1220 aaKnown RBP9.57□□□□□ -0.88
CSDE1-214ENST00000530886 SMC1AQ14683 1233 aaKnown RBP9.57□□□□□ -0.88
CSDE1-214ENST00000530886 ARHGAP29Q52LW3 1261 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 DRC7Q8IY82 874 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 TRIM5Q9C035 493 aa9.57□□□□□ -0.88
CSDE1-214ENST00000530886 ZFYVE9O95405 1425 aa9.56□□□□□ -0.88
CSDE1-214ENST00000530886 ADGRL3Q9HAR2 1447 aa9.56□□□□□ -0.88
CSDE1-214ENST00000530886 MON2Q7Z3U7 1717 aa9.56□□□□□ -0.88
CSDE1-214ENST00000530886 EIF3CLB5ME19 914 aaKnown RBP9.56□□□□□ -0.88
CSDE1-214ENST00000530886 LUZP1Q86V48 1076 aa9.56□□□□□ -0.88
CSDE1-214ENST00000530886 EFCAB13Q8IY85 973 aa9.56□□□□□ -0.88
CSDE1-214ENST00000530886 EIF3CQ99613 913 aaKnown RBP9.56□□□□□ -0.88
CSDE1-214ENST00000530886 PHLPP2Q6ZVD8 1323 aa9.56□□□□□ -0.88
CSDE1-214ENST00000530886 EFCAB8A8MWE9 144 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms