RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	ZPR1	O75312	459 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	SMIM5	Q71RC9	77 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	CDAN1	Q8IWY9	1227 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	MBIP	Q9NS73	344 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	C5	P01031	1676 aa		10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	SIPA1L3	O60292	1781 aa	Predicted RBP	10.07	□□□□□ -0.8
MS4A6A-208	ENST00000528851	ERBB4	Q15303	1308 aa		10.06	□□□□□ -0.8
MS4A6A-208	ENST00000528851	GYS1	P13807	737 aa		10.06	□□□□□ -0.8
MS4A6A-208	ENST00000528851	KIF12	Q96FN5	646 aa		10.06	□□□□□ -0.8
MS4A6A-208	ENST00000528851	CIC	Q96RK0	1608 aa	Predicted RBP	10.06	□□□□□ -0.8
MS4A6A-208	ENST00000528851	DLG5	Q8TDM6	1919 aa		10.06	□□□□□ -0.8
MS4A6A-208	ENST00000528851	TAF1L	Q8IZX4	1826 aa		10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	RGL2	O15211	777 aa		10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	ARX	Q96QS3	562 aa		10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	SALL2	Q9Y467	1007 aa	Predicted RBP	10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	NBPF26	B4DH59	902 aa		10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	NBPF10	Q6P3W6	841 aa	Known RBP	10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	NBPF15	Q8N660	670 aa		10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.05	□□□□□ -0.8
MS4A6A-208	ENST00000528851	USP42	Q9H9J4	1324 aa	Known RBP	10.04	□□□□□ -0.8
MS4A6A-208	ENST00000528851	QSER1	Q2KHR3	1735 aa		10.04	□□□□□ -0.8
MS4A6A-208	ENST00000528851	UBR2	Q8IWV8	1755 aa		10.04	□□□□□ -0.8
MS4A6A-208	ENST00000528851	EIF2S2	P20042	333 aa	Known RBP	10.04	□□□□□ -0.8
MS4A6A-208	ENST00000528851	TM4SF1	P30408	202 aa		10.04	□□□□□ -0.8
MS4A6A-208	ENST00000528851	DUSP27	Q5VZP5	1158 aa		10.04	□□□□□ -0.8
MS4A6A-208	ENST00000528851	USPL1	Q5W0Q7	1092 aa		10.04	□□□□□ -0.8
MS4A6A-208	ENST00000528851	CLEC4G	Q6UXB4	293 aa		10.04	□□□□□ -0.8
MS4A6A-208	ENST00000528851	VIRMA	Q69YN4	1812 aa	Known RBP	10.04	□□□□□ -0.8
MS4A6A-208	ENST00000528851	COL15A1	P39059	1388 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	POTEF	A5A3E0	1075 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	GOLGA2	Q08379	1002 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	PDIA6	Q15084	440 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	DZIP3	Q86Y13	1208 aa	Known RBP	10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	MYH16	Q9H6N6	1097 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	CASZ1	Q86V15	1759 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	TJP1	Q07157	1748 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	SENP3-EIF4A1	A0A087X0R7	540 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	MSL1	Q68DK7	614 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	SRP68	Q9UHB9	627 aa	Known RBP	10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	TBC1D2B	Q9UPU7	963 aa		10.03	□□□□□ -0.8
MS4A6A-208	ENST00000528851	ZNF521	Q96K83	1311 aa		10.02	□□□□□ -0.8
MS4A6A-208	ENST00000528851	COL5A3	P25940	1745 aa	Predicted RBP	10.02	□□□□□ -0.8
MS4A6A-208	ENST00000528851	ERVV-1	B6SEH8	477 aa		10.02	□□□□□ -0.81
MS4A6A-208	ENST00000528851	BCL2L12	Q9HB09	334 aa		10.02	□□□□□ -0.81
MS4A6A-208	ENST00000528851	DBF4	Q9UBU7	674 aa	Predicted RBP	10.02	□□□□□ -0.81
MS4A6A-208	ENST00000528851	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.02	□□□□□ -0.81
MS4A6A-208	ENST00000528851	PARP3	Q9Y6F1	533 aa		10.02	□□□□□ -0.81
MS4A6A-208	ENST00000528851	CAMTA2	O94983	1202 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	MMP10	P09238	476 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	MYL6B	P14649	208 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	FKBP8	Q14318	412 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	KRT24	Q2M2I5	525 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	HDGFL1	Q5TGJ6	251 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	C8orf58	Q8NAV2	365 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	SYT17	Q9BSW7	474 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	CD2AP	Q9Y5K6	639 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	UBR3	Q6ZT12	1888 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	KDM3B	Q7LBC6	1761 aa		10.01	□□□□□ -0.81
MS4A6A-208	ENST00000528851	ELL2	O00472	640 aa	Predicted RBP	10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	PIP4K2A	P48426	406 aa	Predicted RBP	10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	IER5L	Q5T953	404 aa		10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	CCDC30	Q5VVM6	783 aa		10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	LRP10	Q7Z4F1	713 aa		10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	HYPK	Q9NX55	129 aa		10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	ZNF652	Q9Y2D9	606 aa		10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	MYH14	Q7Z406	1995 aa	Known RBP	10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	LRP5	O75197	1615 aa		10	□□□□□ -0.81
MS4A6A-208	ENST00000528851		E9PSI1	815 aa		10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	SEC24B	O95487	1268 aa		10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	TSR2	Q969E8	191 aa	Known RBP	10	□□□□□ -0.81
MS4A6A-208	ENST00000528851	VAMP4	O75379	141 aa		9.99	□□□□□ -0.81
MS4A6A-208	ENST00000528851	NFIX	Q14938	502 aa		9.99	□□□□□ -0.81
MS4A6A-208	ENST00000528851	TWISTNB	Q3B726	338 aa	Predicted RBP	9.99	□□□□□ -0.81
MS4A6A-208	ENST00000528851	KIF6	Q6ZMV9	814 aa		9.99	□□□□□ -0.81
MS4A6A-208	ENST00000528851	NECTIN2	Q92692	538 aa		9.99	□□□□□ -0.81
MS4A6A-208	ENST00000528851	SETDB2	Q96T68	719 aa		9.99	□□□□□ -0.81
MS4A6A-208	ENST00000528851	FHDC1	Q9C0D6	1143 aa	Predicted RBP	9.99	□□□□□ -0.81
MS4A6A-208	ENST00000528851	POLRMT	O00411	1230 aa	Known RBP	9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	SERPINB2	P05120	415 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	TGFB2	P61812	414 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	SLFN5	Q08AF3	891 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	GIGYF2	Q6Y7W6	1299 aa	Known RBP	9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	COPS6	Q7L5N1	327 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	TSPYL6	Q8N831	410 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	MAP3K15	Q6ZN16	1313 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	FANCI	Q9NVI1	1328 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	EXOSC9	Q06265	439 aa	Known RBP	9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	TBC1D9B	Q66K14	1250 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	TTLL7	Q6ZT98	887 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	TRMT2A	Q8IZ69	625 aa	Known RBP	9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	CHPF2	Q9P2E5	772 aa		9.98	□□□□□ -0.81
MS4A6A-208	ENST00000528851	TUBGCP6	Q96RT7	1819 aa		9.97	□□□□□ -0.81
MS4A6A-208	ENST00000528851	COL24A1	Q17RW2	1714 aa		9.97	□□□□□ -0.81
MS4A6A-208	ENST00000528851	HLF	Q16534	295 aa		9.97	□□□□□ -0.81
MS4A6A-208	ENST00000528851	HSP90AB3P	Q58FF7	597 aa		9.97	□□□□□ -0.81
MS4A6A-208	ENST00000528851	ANKRD13D	Q6ZTN6	518 aa		9.97	□□□□□ -0.81
MS4A6A-208	ENST00000528851	XAGE3	Q8WTP9	111 aa		9.97	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms