RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 KRT222Q8N1A0 295 aa21.14■□□□□ 0.97
LTBP3-210ENST00000528516 IPO4Q8TEX9 1081 aaKnown RBP21.13■□□□□ 0.97
LTBP3-210ENST00000528516 FKBP4Q02790 459 aaKnown RBP eCLIP21.13■□□□□ 0.97
LTBP3-210ENST00000528516 NCBP1Q09161 790 aaKnown RBP21.13■□□□□ 0.97
LTBP3-210ENST00000528516 ANKRD36BQ8N2N9 1353 aa21.13■□□□□ 0.97
LTBP3-210ENST00000528516 ARHGAP31Q2M1Z3 1444 aa21.13■□□□□ 0.97
LTBP3-210ENST00000528516 IQSEC2Q5JU85 1478 aa21.12■□□□□ 0.97
LTBP3-210ENST00000528516 NECAB1Q8N987 351 aa21.12■□□□□ 0.97
LTBP3-210ENST00000528516 UBE2HP62256 183 aa21.12■□□□□ 0.97
LTBP3-210ENST00000528516 CKAP2LQ8IYA6 745 aa21.12■□□□□ 0.97
LTBP3-210ENST00000528516 YTHDC2Q9H6S0 1430 aaKnown RBP21.11■□□□□ 0.97
LTBP3-210ENST00000528516 LRMPQ12912 555 aa21.11■□□□□ 0.97
LTBP3-210ENST00000528516 PDRG1Q9NUG6 133 aa21.11■□□□□ 0.97
LTBP3-210ENST00000528516 ATP5J2-PTCD1G3V325 749 aa21.11■□□□□ 0.97
LTBP3-210ENST00000528516 NFXL1Q6ZNB6 911 aa21.11■□□□□ 0.97
LTBP3-210ENST00000528516 RAB11FIP4Q86YS3 637 aa21.1■□□□□ 0.97
LTBP3-210ENST00000528516 MTHFSDQ2M296 383 aaKnown RBP21.1■□□□□ 0.97
LTBP3-210ENST00000528516 PLEKHF1Q96S99 279 aa21.1■□□□□ 0.97
LTBP3-210ENST00000528516 PALD1Q9ULE6 856 aa21.1■□□□□ 0.97
LTBP3-210ENST00000528516 PA2G4Q9UQ80 394 aaKnown RBP21.1■□□□□ 0.97
LTBP3-210ENST00000528516 LTKP29376 864 aa21.1■□□□□ 0.97
LTBP3-210ENST00000528516 ANKRD7Q92527 254 aa21.1■□□□□ 0.97
LTBP3-210ENST00000528516 ARHGAP45Q92619 1136 aa21.1■□□□□ 0.97
LTBP3-210ENST00000528516 CALCOCO1Q9P1Z2 691 aa21.1■□□□□ 0.97
LTBP3-210ENST00000528516 PDE1AP54750 535 aa21.09■□□□□ 0.97
LTBP3-210ENST00000528516 RRP12Q5JTH9 1297 aaKnown RBP21.09■□□□□ 0.97
LTBP3-210ENST00000528516 HOMER1Q86YM7 354 aa21.09■□□□□ 0.97
LTBP3-210ENST00000528516 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
LTBP3-210ENST00000528516 CCDC73Q6ZRK6 1079 aa21.09■□□□□ 0.97
LTBP3-210ENST00000528516 FILIP1Q7Z7B0 1213 aa21.09■□□□□ 0.97
LTBP3-210ENST00000528516 SMTNL1A8MU46 457 aa21.09■□□□□ 0.97
LTBP3-210ENST00000528516 IRX5P78411 483 aaPredicted RBP21.09■□□□□ 0.97
LTBP3-210ENST00000528516 SLC39A6Q13433 755 aa21.09■□□□□ 0.97
LTBP3-210ENST00000528516 LRRC2Q9BYS8 371 aa21.09■□□□□ 0.97
LTBP3-210ENST00000528516 KCNF1Q9H3M0 494 aa21.08■□□□□ 0.97
LTBP3-210ENST00000528516 LRRC59Q96AG4 307 aaKnown RBP21.08■□□□□ 0.96
LTBP3-210ENST00000528516 ATF3P18847 181 aa21.07■□□□□ 0.96
LTBP3-210ENST00000528516 TRIM34Q9BYJ4 488 aa21.07■□□□□ 0.96
LTBP3-210ENST00000528516 PHAXQ9H814 394 aaKnown RBP21.07■□□□□ 0.96
LTBP3-210ENST00000528516 LUZP1Q86V48 1076 aa21.07■□□□□ 0.96
LTBP3-210ENST00000528516 RALYLQ86SE5 291 aaKnown RBP21.07■□□□□ 0.96
LTBP3-210ENST00000528516 CTNNA3Q9UI47 895 aa21.07■□□□□ 0.96
LTBP3-210ENST00000528516 ANKRD44Q8N8A2 993 aa21.06■□□□□ 0.96
LTBP3-210ENST00000528516 RAB11FIP3O75154 756 aa21.06■□□□□ 0.96
LTBP3-210ENST00000528516 THEMISQ8N1K5 641 aaPredicted RBP21.06■□□□□ 0.96
LTBP3-210ENST00000528516 INTS4Q96HW7 963 aaKnown RBP21.06■□□□□ 0.96
LTBP3-210ENST00000528516 STX6O43752 255 aa21.06■□□□□ 0.96
LTBP3-210ENST00000528516 ZSCAN22P10073 491 aaPredicted RBP21.06■□□□□ 0.96
LTBP3-210ENST00000528516 TRDNQ13061 729 aa21.05■□□□□ 0.96
LTBP3-210ENST00000528516 TRMT1Q9NXH9 659 aaKnown RBP21.05■□□□□ 0.96
LTBP3-210ENST00000528516 CEP135Q66GS9 1140 aa21.05■□□□□ 0.96
LTBP3-210ENST00000528516 KIF1BPQ96EK5 621 aa21.05■□□□□ 0.96
LTBP3-210ENST00000528516 ESYT1Q9BSJ8 1104 aa21.05■□□□□ 0.96
LTBP3-210ENST00000528516 ME1P48163 572 aa21.05■□□□□ 0.96
LTBP3-210ENST00000528516 SNRKQ9NRH2 765 aa21.05■□□□□ 0.96
LTBP3-210ENST00000528516 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
LTBP3-210ENST00000528516 DNM1Q05193 864 aaKnown RBP21.04■□□□□ 0.96
LTBP3-210ENST00000528516 CEP85Q6P2H3 762 aa21.04■□□□□ 0.96
LTBP3-210ENST00000528516 CLTCQ00610 1675 aaKnown RBP21.04■□□□□ 0.96
LTBP3-210ENST00000528516 CCDC82Q8N4S0 544 aa21.04■□□□□ 0.96
LTBP3-210ENST00000528516 DNAAF4Q8WXU2 420 aa21.04■□□□□ 0.96
LTBP3-210ENST00000528516 SIGLEC1Q9BZZ2 1709 aa21.04■□□□□ 0.96
LTBP3-210ENST00000528516 METP08581 1390 aa21.04■□□□□ 0.96
LTBP3-210ENST00000528516 SYNE3Q6ZMZ3 975 aa21.04■□□□□ 0.96
LTBP3-210ENST00000528516 FAM177A1Q8N128 213 aaPredicted RBP21.04■□□□□ 0.96
LTBP3-210ENST00000528516 MYD88Q99836 296 aa21.04■□□□□ 0.96
LTBP3-210ENST00000528516 NUP62CLQ9H1M0 184 aa21.04■□□□□ 0.96
LTBP3-210ENST00000528516 TPM4P67936 248 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 CHRNA2Q15822 529 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 MAP3K11Q16584 847 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 TNMDQ9H2S6 317 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 DDX41Q9UJV9 622 aaKnown RBP21.03■□□□□ 0.96
LTBP3-210ENST00000528516 PAXBP1Q9Y5B6 917 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 TTC21BQ7Z4L5 1316 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 TERF2Q15554 542 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 NCBP3Q53F19 620 aaKnown RBP21.03■□□□□ 0.96
LTBP3-210ENST00000528516 CERS3Q8IU89 383 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 RAD21O60216 631 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 PSMA5P28066 241 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 TTLL5Q6EMB2 1281 aa21.03■□□□□ 0.96
LTBP3-210ENST00000528516 NRBP1Q9UHY1 535 aa21.02■□□□□ 0.96
LTBP3-210ENST00000528516 CCT2P78371 535 aaKnown RBP21.02■□□□□ 0.96
LTBP3-210ENST00000528516 MAP3K2Q9Y2U5 619 aa21.02■□□□□ 0.96
LTBP3-210ENST00000528516 CLIP2Q9UDT6 1046 aa21.02■□□□□ 0.96
LTBP3-210ENST00000528516 PTPN14Q15678 1187 aa21.01■□□□□ 0.95
LTBP3-210ENST00000528516 ZNF397Q8NF99 534 aaPredicted RBP21.01■□□□□ 0.95
LTBP3-210ENST00000528516 FAM200AQ8TCP9 573 aa21.01■□□□□ 0.95
LTBP3-210ENST00000528516 SLFN14P0C7P3 912 aa21.01■□□□□ 0.95
LTBP3-210ENST00000528516 KRT85P78386 507 aa21.01■□□□□ 0.95
LTBP3-210ENST00000528516 CWF19L2Q2TBE0 894 aaKnown RBP21.01■□□□□ 0.95
LTBP3-210ENST00000528516 NOL10Q9BSC4 688 aaKnown RBP21.01■□□□□ 0.95
LTBP3-210ENST00000528516 ABCC4O15439 1325 aa21.01■□□□□ 0.95
LTBP3-210ENST00000528516 CTIFO43310 598 aaKnown RBP21.01■□□□□ 0.95
LTBP3-210ENST00000528516 CABP4P57796 275 aa21.01■□□□□ 0.95
LTBP3-210ENST00000528516 CUL4AQ13619 759 aa21.01■□□□□ 0.95
LTBP3-210ENST00000528516 KIF18AQ8NI77 898 aa21.01■□□□□ 0.95
LTBP3-210ENST00000528516 SPATA32Q96LK8 384 aa21.01■□□□□ 0.95
LTBP3-210ENST00000528516 SYT1P21579 422 aa21■□□□□ 0.95
LTBP3-210ENST00000528516 EYA1Q99502 592 aa21■□□□□ 0.95
LTBP3-210ENST00000528516 NEXMIFQ5QGS0 1516 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms